Genetic structure of the tall sea pen Funiculina quadrangularis in NW Scottish sea lochs

The tall sea pen Funiculina quadrangularis has a patchy distribution around the UK, being found in sheltered waters below 20 m depth on the northwest coast of Scotland and Ireland. The limited distribution and sensitivity to bottom fishing activities make F. quadrangularis vulnerable to reduction in population numbers that may lead to genetic isolation and reduced diversity. Because of this vulnerability and low resilience to physical disturbance, the tall sea pen is recognised as a Species of Principle Importance under the Natural Environment and Rural Communities Act, 2006, UK. ( http://www.legislation.gov.uk/ukpga/2006/16/contents ) and is also on the Biodiversity Action Plan list of Priority Species for the UK. In the Mediterranean it is recognised as a sensitive and essential fish habitat because it forms habitat for several commercially important crustaceans. The aim of this study was to understand the current state of the genetic structure and gene flow of F. quadrangularis in areas of NW Scotland. We developed 10 microsatellite markers and used them to genotype 176 samples from four populations. Overall, our results suggest that there is high genetic diversity and high gene flow between colonies of F. quadrangularis in and among locations in Loch Linnhe and Loch Duich. As a result of the high rates of gene flow, genetic differentiation between sites was low. This may provide resilience to human impacts if distant populations have a high connectivity. However, care must be taken, as small but significant isolation by distance was found between the most geographically distant sites and only a small part of the species range was examined in this study. The genetic tools developed here will provide a foundation for wider studies of this vulnerable species.     

Spatial and temporal variation in subtidal molluscan diversity amongst temperate estuarine habitats

Effective management of marine ecosystems is enhanced when detailed information on biodiversity is available. Key information to underpin management actions and conservation planning includes relationships between species assemblages and environmental gradients, and information on species distributions. We conducted a subtidal biodiversity assessment of surface‐dwelling subtidal molluscs in eight a priori defined habitat types using underwater visual censuses to quantitatively explore relationships between molluscan assemblages, and their correlation with benthic habitats and abiotic variables. In addition, variations in diversity were examined for two key habitat types (areas dominated by Dendronephthya australis and by filter feeders) over a period of 15 months to examine temporal change. We found that molluscs form distinct assemblages within subtidal habitats, but that assemblages within key habitats show inherent temporal variability. Regional (gamma) diversity of molluscs was found to result from a combination of: (i) within habitat alpha diversity, which increased with habitat complexity; (ii) between habitat beta diversity, with significant differences in molluscan assemblages amongst habitats with differing benthic growth, substrate type, and depth; and (iii) temporal beta diversity, with significant changes detected in molluscan assemblages over time. The results demonstrate how habitats and abiotic variables (principally depth and substrate type) combine to contribute to molluscan biodiversity in temperate estuaries, and illustrate the value of these factors as surrogates for surface‐dwelling subtidal molluscs in conservation planning.     

A multi‐stock,length‐based assessment model for New Zealand rock lobster (Jasus Edwardsii)

We describe a multi‐stock, length‐based Bayesian assessment model for New Zealand spiny lobster (Jasus edwardsii) fisheries. This model allows simultaneous modelling of two or more stocks with a mixture of common and stock‐specific parameters: recruitment is always stock‐specific, but any other parameter can be specified as either common or stock‐specific. Common parameters are estimated from a wider base than they would be in a single‐stock model. The model's time step is flexible and can be changed during the period being modelled to accommodate better data quality in recent data. Other options include the capacity to estimate movements among stocks, allow density‐dependent growth, and choose among likelihood functions for the various data sets, between finite and instantaneous fishing dynamics and between two forms of selectivity curve.     

Northern Adriatic phytoplankton response to short Po River discharge pulses during summer stratified conditions

A 275‐km‐long transversel Northern Adriatic profile from the mouth of the Po River (Italian Adriatic coast) to the Kvarner region (Croatian coastal island area) was investigated in three successive case studies in August 2008, 2009 and 2010. The short Po River pulses in August result in the surface advection of riverine water, nutrients and phytoplankton from the western to the eastern side of the Adriatic. This surface spreading exhibits inter‐annual variability depending on the riverine discharge in the preceding period. The Po River discharge pulse in August 2010 in particular resulted in an extraordinary tongue‐like advection of riverine water, nutrients, and phytoplankton towards the Eastern Adriatic coast. The phenomenon was detected using both satellite imagery and classical oceanographic measurements. In the advective water, toxic dinoflagellates were most abundant in August 2010, when the influence of the Po was greatest.     

A pleistocene mummified ostracod from the Wairarapa district

A mummified specimen of Scottia insularis Chapman is recorded from beds of Upper Nukumaruan age (Pleistocene) at Gladstone in the Wairarapa Valley. This is the first record of a mummified species from New Zealand.     

Breeding,settlement and survival of barnacles at artificially modified shore levels at Leigh,New Zealand

The breeding and settlement seasons of the intertidal barnacles Chamaesipho brunnea, C. columna and Elminius plicatus were determined, and experiments using cages on the shore to examine barnacle survival and growth rate at four levels were carried out at Leigh during 1964–66.

Chamaesipho brunnea bred in spring and summer; C. columna and E. plicatus bred throughout the year, but settled intermittently. When protected from predators and from overgrowth by algae, all three species survived at levels lower than normal. At higher levels C. columna, E. modestus, Balanus trigonus and Tetraclita purpuraseens survived for significant periods (C. brunnea occurs naturally higher on the shore than the highest experimental level).     

Depth of settlement of two mussel species on suspended collectors in Marlborough Sounds,New Zealand (Note)

The preferred depth of settlement and settlement period of two species of mussel spat were monitored at Yncyca Bay (NZMS1 S15 220460) and Wet Inlet (NZMS1 S16 265432) in the Marlborough Sounds on collectors suspended in 0–4 m of water between 20 October 1975 and 4 April 1976. Peak settlement of Mytilus edulis aoteanus was between 20 October 1975 and 4 January 1976, and decreased with increasing depth. Peak settlement of Perna canaliculus was between 16 February 1976 and 12 April 1976, and showed no preferred depth of settlement.

Capture of wild stocks of Mytilus edulis aoteanus and Perna canaliculus spat for use in aquaculture has become more reliable through accurate forecasting of peak settlement periods, and knowledge of preferred depth of settlement of the two species.

Preferred depth of settlement of spat may affect the shore zonation of mussels.     

Biochemical‐genetic and meristic evidence that blue and copper moki (Teleostei: Latridae: Latridopsis) are discrete species

Specimens of blue moki Latridopsis ciliaris (Forster in Bloch & Schneider, 1801) from New Zealand were shown to differ from specimens of copper moki Latridopsis forsteri (Castelnau, 1872) using two genetic methods—allozymes and muscle proteins. Allozyme techniques revealed fixed differences between blue and copper moki at 4 out of 15 loci. There was a genetic distance of 0.31–0.34 between population samples of the two colour morphs. The two morphs were also distinguished by iso‐electric focusing of muscle proteins. Meristic characters, counted in the specimens studied with genetic markers, revealed diagnostic markers in tubed lateral line scales and scales in the lower transverse series. It is concluded that specimens of blue moki from New Zealand and copper moki from New Zealand and Tasmania are valid species.     

Length‐mass models for some common New Zealand littoral‐benthic macroinvertebrates,with a note on within‐taxon variability in parameter values among published models

Regression models are developed and presented to predict dry mass (mg) from two linear dimensions (mm) for 17 benthic macroinvertebrate taxa common to littoral zones of New Zealand lakes. We also provide regression models to predict body length from head capsule width for the major insect taxa. Dry mass was best explained as a power function of all linear dimensions: M = aL _b .Parameters are presented in the log₁₀‐transformed linear form of this power function. Body length was a simple linear function of head capsule width for all insect taxa, hence parameters for these models are presented as untransformed values. We also provide family level models for the Chironomidae, and compare our chironomid body length‐mass model with other published Chrionomidae length‐mass models. There was a very high degree of variability in parameter values among published length‐mass models for the family Chironomidae (mean coefficient of variation for mass at length = 148%). We discuss the potential causes and implications of this variability.     

First identification of the cylindrospermopsin‐producing cyanobacterium Cylindrospermopsis raciborskii in New Zealand

Cylindrospermopsis raciborskii is a planktonic freshwater cyanobacterium that is becoming increasingly prevalent in water bodies worldwide. During a survey of toxic cyanobacteria in New Zealand, C. raciborskii was identified in a sample collected from Lake Waahi (Waikato). This is the first identification of this species in New Zealand. Liquid chromatography‐mass spectrometry and liquid chromatography‐tandem mass spectrometry were used to confirm the presence of the cyanotoxins cylindrospermopsin (CYN) and deoxy‐cylindrospermopsin (do‐CYN). Detection of CYN and do‐CYN demonstrates that C. raciborskii is a now a species of concern in recreational, stock drinking, and potable water supplies in New Zealand.