Three main stressors acting on the Ria Formosa lagoonal system (Southern Portugal): Physical stress, organic matter pollution and the land–ocean gradient

During the last 15 years of the 20th century, several researchers carried out extensive sampling of benthic macrofauna communities in the Ria Formosa lagoon. The main objective of this paper is to discern the main communities of benthic fauna of the Ria Formosa and the leading stressors that limit them based on this large data set.The high species richness and high diversity values observed at most of the stations or groups of stations indicate a good ecological status, with the exception of the sewage-impacted areas and the physically stressed areas. It was possible to define three main stressors acting on the Ria Formosa. The most important is the physical stress imposed by the limited water renewal in some areas of the Ria Formosa. The second is the nutrient and organic matter pollution that is limited to the vicinity of the sewage outfall stations and to some locations of the Ria Formosa. This is due to the dual effects of the low residence time of water, but also due to a degradation of water quality in places of relatively restricted water circulation but with high primary production, symptoms of eutrophication. The third stressor is the natural land–ocean gradient, denoting the influence of seawater exchanges and emersion time, attenuated by the high water exchange rates of Ria Formosa.It was possible to differentiate the anthropogenic stress from the natural physical stress through the application of multivariate analysis. However, both structural (species richness and diversity indices) and functional indicators (trophic composition) indicate the same trend – low species richness, low diversity indices, and a community dominated by detritivores species at the locations characterized by high anthropogenic impact or by physical stress. The physically stressed areas were dominated by chironomid larvae and hydrobiid gastropods and the most polluted areas were dominated by oligochaetes, mainly tubificids.     

Mapping groundwater discharge to a coastal lagoon using combined spatial airborne thermal imaging,radon (222Rn) and multiple physicochemical variables

Coastal lagoons are significant wetland environments found on coastlines throughout the world. Groundwater seepage may be a key component of lagoon water balances, though only a few studies have investigated large (>100 km²) coastal lagoons. In this study, we combined airborne thermal infrared imagery with continuous measurements of radon (²²²Rn—a natural groundwater tracer), conductivity, water temperature and dissolved oxygen to map groundwater seepage to a large coastal lagoon in New Zealand. We found evidence of seepage along the margins of the lagoon but not away from the margins. Our findings confirmed previously known seepage zones and identified new potential locations of groundwater inflow. Both point source and diffuse seepage occurred on the western and northwestern margins of the lagoon and parallel to the barrier between the lagoon and sea. These observations imply geologic controls on seepage. The combination of remote sensing and in-situ radon measurements allowed us to effectively map groundwater discharge areas across the entire lagoon. Combined, broad-scale qualitative methods built confidence in our interpretation of groundwater discharge locations in a large, dynamic coastal lagoon.     

Macrobenthic community changes due to dystrophic events and freshwater inflow: Changes in space and time in a Mediterranean lagoon (Gialova lagoon, SW Greece)

This paper considers the hypothesis that changes in community structure through the control of the larvae maintenance and of the biological traits of the species mostly contribute to the spatio-temporal community pattern. This is supported by the results of the study, the changes to the macrobenthic community pattern deriving from two sampling periods in Gialova lagoon (SW Greece), carried out on a seasonal basis for two yearly periods: 1994-95 and 1998-99. Cognetti’s hypothesis that populations of the tolerant species occupying coastal marine habitats may belong to different species is another alternative hypothesis still to be tested. The importance of alternative management plans aiming at the amelioration of the hydrodynamic conditions of the lagoons and supported by continuous scientific monitoring is highlighted. Two canals bringing fresh water were opened at the beginning of the second sampling period, an intervention among others, suggested by the management plan proposed after the end of the first sampling period. The results show considerable variations in the values of the key environmental variables, for instance long periods with negative Redox potential values, decreased salinity and increased concentrations of the particulate organic matter and of the nutrients. The variables were correlated with the spatio-temporal community pattern, characterized during the second sampling period by: (i) greater dissimilarities among stations/seasons; (ii) disruption of the periodic trend observed on the seasonal scale; (iii) larger relative dissimilarities among the patterns stemming from the macrobenthos and the most abundant groups (polychaetes, molluscs, crustaceans); (iv) significant decrease in abundance or even the disappearance of several marine origin species, along with increased abundance in a few brackish-water species. All of the above changes in the community pattern are considered as early warning signals leading towards degradation, which has not yet been registered in the phylogenetic/taxonomic structure of the macrobenthic community.     

The influence of environmental variability of a coastal lagoon ecosystem on genetic diversity and structure of white seabream [Diplodus sargus (Linnaeus 1758)] populations

As coastal lagoons serve as nursery areas for some marine and estuarine fish, selective pressures of these brackish or hypersaline lagoons may influence the genetic structure of species and populations. We examined spatial and temporal genetic patterns at eight microsatellite loci in white seabream [Diplodus sargus (Linnaeus 1758)] recruits from the Mar Menor (Southeast Spain) and compared these loci with those in coastal populations from the open sea, observing a high degree of genetic diversity and spatio‐temporal genetic stability. However, the results suggest the presence of subpopulations or genetic substructures in the Mar Menor D. sargus population that could be interpreted as a homogeneous mixture of individuals from three differentiated subpopulations in the Mediterranean and evidence of the Wahlund effect. It also suggests that D. sargus adults return to their original spawning habitat, thus conserving the genetic differences among the respective populations over time. Overall, this study demonstrates the importance of the Mar Menor coastal lagoon as a nursery area for the conservation of genetic diversity of D. sargus populations.     

Ecosystem modelling of coastal lagoons for sustainable management. A case study: Küçüçekmece Lagoon, Turkey

The modelling approach for sustainable management is outlined, the results of management scenarios obtained by the modelling studies are discussed and the results taken from the applications of the best management scenarios are presented as a case study. The best management strategy was observed to be the use of the lagoon as a recreational water body. It may be concluded that the WQRRS ecological model originally developed by the US Corp of Engineers can be used successfully to make a decision between various management strategies for maintaining the sustainability of coastal lagoons.     

Morphometric or morpho-anatomal and genetic investigations highlight allopatric speciation in Western Mediterranean lagoons within the Atherina lagunae species (Teleostei, Atherinidae)

Current distribution of Atherina lagunae poses an interesting biogeographical problem as this species inhabits widely separate circum-Mediterranean lagoons. Statistical analyses of 87 biometric parameters and genetic variation in a portion of the cytochrome b gene were examined in four populations of A. lagunae from Tunisian and French lagoons. The results suggested a subdivision into two distinct Atherinid groups: one included the French lagoonal sand smelts and the second included the Tunisian ones. Tunisian lagoonal sand smelts were distinguished from the French ones by the lower number of lateral line scales, vertebrae, pectorals and first dorsal fin rays and the higher number of lower and total gillrakers. In addition, A. lagunae from Tunisian lagoons are characterised by short preorbital length, developed operculum, broad interorbital space, larger head, robust body and a relatively small first dorsal fin which is positioned backwards. In addition, intraspecific sequence variation in a portion of the cytochrome b gene was examined in 87 individuals from Tunisia and France. The high correlation between the results of the molecular phylogenetic tree and biometric statistical data analysis suggested that two different sibling species or at least sub-species or semi-species have colonised the lagoons. In addition, our analyses suggested that the evolution of A. lagunae probably occurred in two steps including marine sympatric speciation within the large Atherina boyeri complex and a post-Pleistocene colonisation of the lagoons.     

Flow Cytometric Analysis of Coastal Lagoon Bacterioplankton and Picophytoplankton: Fixation and Storage Effects

The effect of different fixation and storage protocols on the flow cytometric (FCM) simultaneous analysis of bacterioplankton and phytoplankton in coastal seawater samples (Mediterranean coastal lagoons) was investigated. FCM measurements (cell number, fluorescence and scatter characteristics) were obtained through DAPI staining. Three fixatives [glutaraldehyde (GA), formaldehyde (FA) and paraformaldehyde (PFA)] and two storage (3 months duration) methods (5 °C and −196 °C) were tested. Two dominant populations were detected in studied samples: bacteria and eukaryotic picophytoplankton. Adding fixatives (2% final concentration) appears necessary to obtain FCM exhaustive counts of all the bacteria and phytoplanktonic cells. This was related to the permeation effect of fixatives which allowed a better DAPI staining of the cells. Maximum fluorescence, i.e. optimal staining of the cells was obtained with FA or PFA, and significant lower fluorescences with GA. Fixed samples stored at 5 °C induced rapid cell loss. Only storage in liquid nitrogen of samples fixed with FA or PFA, allows mid-term (≥4 months) preservation of bacteria or picophytoplankton cell numbers, and limited evolution of DAPI-induced fluorescence and scatter characteristics.     

Biology of three Malacostraca (Decapoda) in a Mediterranean lagoon with particular emphasis on the effect of rapid environmental changes on the activity (catchability) of the species

The activity of three Malacostraca (Decapoda), Crangon crangon, Carcinus aestuarii and Paleamon squilla, was studied following rapid environmental changes in a Mediterranean lagoon linked temporarily with the sea. Nekton was sampled every 2–3 days using fixed fyke nets. A canonical analysis and a stepwise multiple regression were computed to determine which factor(s) can predict or account for the catch of these three decapods. In spite of rapid environmental changes no exceptional mortality was observed in each of the three species. Temperature is the environmental factor with major impact on the activity of C. crangon. Activity of P. squilla is controlled by water depth. At a depth of less than 20 cm two factors, salinity and phase of the moon, have a significant influence on the activity of this species. At depths deeper than 20 cm the activity is inhibited. There is only a weak relationship between the catch of C. aestuarii and salinity. Additional data on the life cycle of these species are given. The limitations of a monthly sampling period are discussed and the need for more short-term, consecutive sampling periods is stressed in order to understand the dynamics of systems with rapid environmental fluctuations.