Advances of Soil Microbiology in the Last Decade in China

Soils are fundamental to preservation and sustainability of life-support system on Earth. Soils develop as the most dynamic and complex interface linking atmosphere, hydrosphere, lithosphere and biosphere. Soils harbor enormous diversities of microbial communities as the primary driving forces for global exchanges of matter and energy on our planet. Despite of its profound importance, the invisible soil microbes have for long been underappreciated. In the early 2000s, there has been growing awareness that soil microbiology has attracted huge interest from nonsoil scientists due to the introduction of three domain phylogeny. It is also known as tree of life theory which is widely recognized as the most accurate reflection of the relatedness of all organisms and provides us with a tool to classify and elucidate the largely untapped resource of soil microbial communities. In January 2005, the Department of Earth Sciences of National Natural Science Foundation of China organized a workshop of ‘Soil Biology and Soil Processes’ with focused discussion on soil microbiology research frontiers. The workshop outlined research priorities, cross disciplinary research opportunities, technological needs and potential breakthroughs within soil microbiology. This workshop has witnessed the rapid advances of soil microbiology in soil nutrient transformation, global environmental changes and environmental remediation over the last decade in China. This article will give a brief review on soil microbial researches in the past decade in China, present the status quo of funding system and highlight the challenge and opportunities for future soil microbiology in China.     

不同土壤热通量测算方法的比较及其对地表能量平衡闭合影响的研究

土壤热通量是地表能量平衡的重要分量,对其测算方法的研究对理解能量平衡过程具有十分重要的意义.利用2010年馆陶站土壤热通量等相关观测数据对多种测算土壤热通量的方法:实测土壤热通量和热储存量的结合方法(PlateCal)、热传导方程校正法(TDEC)、谐波分析法(HM)、平均土壤热电偶法(TCAV)、耦合热传导—对流法(ITCC)获取的地表土壤热通量进行了对比分析,并且采用最优方法计算馆陶站2008-2010年的地表土壤热通量,分析了该站土壤热通量日、季节变化特征.主要结论如下:①PlateCal和TDEC法分别为获取土壤热通量的最优观测与计算方法,而HM,TCAV和ITCC法计算结果均不理想;②PlateCal与TDEC法对地表土壤温度均不敏感,而HM法对地表土壤温度则比较敏感,各种地表土壤热通量的观测与计算方法均对土壤湿度敏感;③馆陶站冬小麦、玉米覆盖地表及地表裸露时期的地表土壤热通量均呈现典型的日、季节变化特征,与净辐射变化趋势一致;④考虑热储存后,可将馆陶站2010年各月地表能量闭合率提高4％～11％,对2008-2010年的年能量平衡闭合率提高3％～5％.     

210Pb ex示踪法技术原理及其在土壤侵蚀中的应用

土壤侵蚀是全球性的环境问题之一,严重威胁到资源、环境和社会经济的可持续发展。应用核素示踪技术研究土壤侵蚀已成为当前该领域研究热点,它体现出了很多的优越性,并在今后研究中有着广阔的应用前景。介绍了~(210)Pb_(ex)的示踪原理,概述了~(210)Pb_(ex)在土壤侵蚀示踪研究中存在的关键性问题及其应用,并对其研究进行了展望。     

An easily implemented agro-hydrological procedure with dynamic root simulation for water transfer in the crop–soil system: Validation and application

Models for water transfer in the crop–soil system are key components of agro-hydrological models for irrigation, fertilizer and pesticide practices. Many of the hydrological models for water transfer in the crop–soil system are either too approximate due to oversimplified algorithms or employ complex numerical schemes. In this paper we developed a simple and sufficiently accurate algorithm which can be easily adopted in agro-hydrological models for the simulation of water dynamics. We used a dual crop coefficient approach proposed by the FAO for estimating potential evaporation and transpiration, and a dynamic model for calculating relative root length distribution on a daily basis. In a small time step of 0.001 d, we implemented algorithms separately for actual evaporation, root water uptake and soil water content redistribution by decoupling these processes. The Richards equation describing soil water movement was solved using an integration strategy over the soil layers instead of complex numerical schemes. This drastically simplified the procedures of modeling soil water and led to much shorter computer codes. The validity of the proposed model was tested against data from field experiments on two contrasting soils cropped with wheat. Good agreement was achieved between measurement and simulation of soil water content in various depths collected at intervals during crop growth. This indicates that the model is satisfactory in simulating water transfer in the crop–soil system, and therefore can reliably be adopted in agro-hydrological models. Finally we demonstrated how the developed model could be used to study the effect of changes in the environment such as lowering the groundwater table caused by the construction of a motorway on crop transpiration.     

Internal soil moisture and piezometric responses to rainfall-induced shallow slope failures

Better knowledge regarding internal soil moisture and piezometric responses in the process of rainfall-induced shallow slope failures is the key to an effective prediction of the landslide and/or debris flow initiation. To this end, internal soil moisture and piezometric response of 0.7-m-deep, 1.5-m-wide, 1.7-m-high, and 3.94-m-long semi-infinite sandy slopes rested on a bi-linear impermeable bedrock were explored using a chute test facility with artificial rainfall applications. The internal response time defined by the inflection point of the soil moisture and piezometric response curves obtained along the soil–bedrock interface were closely related to some critical failure states, such as the slope toe failure and extensive slope failures. It was also found that the response times obtained at the point of abrupt bedrock slope decrease can be used as indicators for the initiation of rainfall-induced shallow slope failures. An investigation of spatial distributions of soil water content, ω (or degrees of saturation, S_r), in the slope at critical failure states shows that the 0.2 m – below – surface zone remains unsaturated with S_r 40–60%, regardless of their distances from the toe and the rainfall intensity. Non-uniform distributions of ω (or S_r) along the soil–bedrock interface at critical failure states were always associated with near-saturation states (S_r 80–100%) around the point of bedrock slope change or around the transient ‘toe’ upstream of the slumped mass induced by the retrogressive failure of the slope. These observations suggest the important role of the interflow along the soil–bedrock interface and the high soil water content (or high porewater pressure) around the point of bedrock slope deflection in the rainfall-induced failure of sandy slopes consisting of shallow impermeable bedrocks. The present study proposes an ‘internal response time’ criterion to substantiate the prediction of rainfall-induced shallow slope failures. It is believed that the ‘internal response time’ reflects the overall characteristics of a slope under rainfall infiltration and can be as useful as the conventional meteorology-based threshold times. The ‘internal response time’ theory can be generalized via numerical modeling of slope hydrology, slope geology and slope stability in the future.     

Intercomparison of the total storage deficit index (TSDI) over two Canadian Prairie catchments

Retrieval of the terrestrial moisture storage dataset from the Gravity Recovery and Climate Experiment (GRACE) satellite remote sensing system is possible when the catchment of interest is of large spatial scale. These dataset are of paramount importance for the estimation of the total storage deficit index (TSDI), which enables the characterization of a particular drought event from the perspective of the terrestrial moisture storage over that catchment. Incidentally, the GRACE gravity signal over the 13,000 km² Upper Assiniboine River Basin on the drought-prone Canadian Prairie is so poor therefore making the computation of the total storage deficit index for this basin infeasible. Consequently, the estimation of the terrestrial moisture storage from other reliable sources becomes imperative in order to enable the computation of the TSDI over this basin.This study explores the utilization of the Variable Infiltration Capacity (VIC) model, a physically based, spatially distributed hydrologic model to simulate the total moisture storage over the Upper Assiniboine River Basin which was then employed in the estimation of the TSDI over this basin for subsequent characterization of the recent Prairie-wide drought. Interestingly, the temporal patterns in the computed TSDI from the VIC model reveal a strong resemblance with the same drought characterization undertaken over the larger adjacent Saskatchewan River Basin, which was accomplished utilizing terrestrial moisture storage from the GRACE-based approach. Additionally, these independent techniques employed in the characterization of the last Prairie drought over the two adjacently situated basins resulted in similar drought severity classification from the standpoint of the total moisture storage deficits over these basins. This study has therefore shown that in the computation of the total storage deficit index over small-scale catchments during anomalous climatic conditions that propagate extreme dryness through the terrestrial hydrologic systems, simulations of the total water storage from a structurally sound model such as the VIC model could be resourceful for the computation of the monthly total storage deficit index if no constraint is placed on the availability of accurate meteorological forcing.     

Controls on event runoff coefficients in the eastern Italian Alps

Analyses of event runoff coefficients provide essential insight on catchment response, particularly if a range of catchments and a range of events are compared by a single indicator. In this study we examine the effect of climate, geology, land use, flood types and initial soil moisture conditions on the distribution functions of the event runoff coefficients for a set of 14 mountainous catchments located in the eastern Italian Alps, ranging in size from 7.3 to 608.4 km². Runoff coefficients were computed from hourly precipitation, runoff data and estimates of snowmelt. A total of 535 events were analysed over the period 1989–2004. We classified each basin using a “permeability index” which was inferred from a geologic map and ranged from “low” to “high permeability”. A continuous soil moisture accounting model was applied to each catchment to classify ‘wet’ and ‘dry’ initial soil moisture conditions. The results indicate that the spatial distribution of runoff coefficients is highly correlated with mean annual precipitation, with the mean runoff coefficient increasing with mean annual precipitation. Geology, through the ‘permeability index’, is another important control on runoff coefficients for catchments with mean annual precipitation less than 1200 mm. Land use, as indexed by the SCS curve number, influences runoff coefficient distribution to a lesser degree. An analysis of the runoff coefficients by flood type indicates that runoff coefficients increase with event snowmelt. Results show that there exists an intermediate region of subsurface water storage capacity, as indexed by a flow–duration curve-based index, which maximises the impact of initial wetness conditions on the runoff coefficient. This means that the difference between runoff coefficients characterised by wet and dry initial conditions is negligible both for basins with very large storage capacity and for basins with small storage capacity. For basins with intermediate storage capacities, the impact of the initial wetness conditions may be relatively large.     

A novel framework integrating downhole array data and site response analysis to extract dynamic soil behavior

Seismic site response analysis is commonly used to predict ground response due to local soil effects. An increasing number of downhole arrays are deployed to measure motions at the ground surface and within the soil profile and to provide a check on the accuracy of site response analysis models. Site response analysis models, however, cannot be readily calibrated to match field measurements. A novel inverse analysis framework, self-learning simulations (SelfSim), to integrate site response analysis and field measurements is introduced. This framework uses downhole array measurements to extract the underlying soil behavior and develops a neural network-based constitutive model of the soil. The resulting soil model, used in a site response analysis, provides correct ground response. The extracted cyclic soil behavior can be further enhanced using multiple earthquake events. The performance of the algorithm is successfully demonstrated using synthetically generated downhole array recordings.     

A land surface data assimilation framework using the land information system: Description and applications

The Land Information System (LIS) is an established land surface modeling framework that integrates various community land surface models, ground measurements, satellite-based observations, high performance computing and data management tools. The use of advanced software engineering principles in LIS allows interoperability of individual system components and thus enables assessment and prediction of hydrologic conditions at various spatial and temporal scales. In this work, we describe a sequential data assimilation extension of LIS that incorporates multiple observational sources, land surface models and assimilation algorithms. These capabilities are demonstrated here in a suite of experiments that use the ensemble Kalman filter (EnKF) and assimilation through direct insertion. In a soil moisture experiment, we discuss the impact of differences in modeling approaches on assimilation performance. Provided careful choice of model error parameters, we find that two entirely different hydrological modeling approaches offer comparable assimilation results. In a snow assimilation experiment, we investigate the relative merits of assimilating different types of observations (snow cover area and snow water equivalent). The experiments show that data assimilation enhancements in LIS are uniquely suited to compare the assimilation of various data types into different land surface models within a single framework. The high performance infrastructure provides adequate support for efficient data assimilation integrations of high computational granularity.     

Multi-step and two-step experiments in heterogeneous porous media to evaluate the relevance of dynamic effects

The determination of hydraulic properties in non-stationary experiments is suspected to be affected by dynamic effects. This is based on thermodynamic considerations on the pore scale displacement of wetting and non-wetting phase. But also macroscopic heterogeneities at the continuum scale may influence the dynamics of water during drainage and wetting. In this paper we investigate both aspects. Firstly, we present the results of typical multi-step outflow experiments in heterogeneous sand columns which are compared with two-step outflow experiments covering the same pressure range. The discrepancies caused by pressure steps of different size reveal the impact of dynamic effects due to the non-stationarity of the experiments.