Variation in microbial biomass and community structure in sediments of peter the great bay (sea of japan/east sea), as estimated from fatty acid biomarkers

Variation in the microbial biomass and community structure found in sediment of heavily polluted bays and the adjacent unpolluted areas were examined using phospholipid fatty acid analysis. Total microbial biomass and microbial community structure were responding to environmental determinants, sediment grain size, depth of sediment, and pollution due to petroleum hydrocarbons. The marker fatty acids of microeukaryotes and prokaryotes - aerobic, anaerobic, and sulfate-reducing bacteria -were detected in sediments of the areas studied. Analysis of the fatty acid profiles revealed wide variations in the community structure in sediments, depending on the extent of pollution, sediment depth, and sediment grain size. The abundance of specific bacterial fatty acids points to the dominance of prokaryotic organisms, whose composition differed among the stations. Fatty acid distributions in sediments suggest the high contribution of aerobic bacteria. Sediments of polluted sites were significantly enriched with anaerobic bacteria in comparison with clean areas. The contribution of this bacterial group increased with the depth of sediments. Anaerobic bacteria were predominantly present in muddy sediments, as evidenced from the fatty acid profiles. Relatively high concentrations of marker fatty acids of sulfate-reducing bacteria were associated with organic pollution in this site. Specific fatty acids of microeukaryotes were more abundant in surface sediments than in deeper sediment layers. Among the microeukaryotes, diatoms were an important component. Significant amounts of bacterial biomass, the predominance of bacterial biomarker fatty acids with abundance of anaerobic and sulfate-reducing bacteria are indicative of a prokaryotic consortium responsive to organic pollution.     

Vertical distribution of the macrobenthic community and its relationships to trace metals and natural sediment characteristics in the lower Douro estuary, Portugal

Vertical distribution (0–15 cm) of the macrobenthic community and its relationships to natural sediment characteristics and trace metal contents and bioavailability were studied at five locations in the lower Douro estuary, Portugal. An analysis of vertical metal distribution, for the interpretation of anthropogenic impact on the estuarine sediments, was also investigated. Sediment characterisation included organic matter, grain size, metals (Al, Fe, Cu, Pb, Cr, Ni, Cd, Zn and Mn), acid volatile sulphide (AVS) and simultaneously extracted metals (SEM). The macrobenthic community had low diversity (14 species), was dominated by small size opportunists and seemed to be controlled mainly by natural factors such as grain size distribution, Al and Fe contents and sediment depth. The vertically heterogeneous distribution of macrobenthic community appears to affect redox status of the sediments and consequently metal bioavailability. Despite anthropogenic contamination in terms of Zn, Cu, Pb, Cr and Ni having already been detected in the north bank, the analysis of vertical distribution was essential for the identification of current anthropogenic contamination in terms of Zn, Pb and Cd in the south bank.     

Mussel Periostracum from Deep-Sea Redox Communities as a Microbial Habitat: 3. Secondary Inhabitants

Abstract. Vacated microborings in periostracum of live mussels of the Florida Escarpment redox community (depth of 3266 m) become a habitat for a prolific secondary microbiota consisting of a variety of prokaryotic and a few eukaryotic organisms. Periostracum surface is also colonized by diverse microorganisms, dominated by presumed chemolithotrophic bacteria with stacks of intracellular lamellae. Unlike sheltered microflora within borings, the surface community is heavily grazed upon by numerous archaeogastropods and ciliates.     

Effects of a Short-term Environmental Change on a Brackish-water Polychaete Community

Abstract. Aquatina lake is a brackish basin, connected with the Adriatic Sea along the mast of Apulia (Italy), with a mean salinity of 26%. The abundance and biomass of fifteen polychaete species were recorded by monthly samples in a pilot area of the lake from February 1989 to February 1990. Naineris laevigata was dominant, both in number of individuals and biomass. During 1990, obstruction of freshwater inflow to the lake caused an increase in salinity up to 4O%, followed by some changes in the polychaete community. Noromasrus hiericeus became dominant, and the abundances of the other species decreased except for Naineris laevipru . Salinity assumed normal values after three months, but community responded slowly becauie the massive presence of N. latericeus inhibited the recovery of other species. An abiotic disturbance, followed by a biotic disturbance, altered the structure of the polychaete community.     

Community Structure and Dynamics of Phytoplankton in the Western Subarctic Pacific Ocean: A Synthesis

The phytoplankton community in the western subarctic Pacific (WSP) is composed mostly of pico- and nanophytoplankton. Chlorophyll a (Chl a) in the <2 μm size fraction accounted for more than half of the total Chl a in all seasons, with higher contributions of up to 75% of the total Chl a in summer and fall. The exception is the western boundary along the Kamchatka Peninsula and Kuril Islands and the Oyashio region where diatoms make up the majority of total Chl a during the spring bloom. Among the picophytoplankton, picoeukaryotes and Synechococcus are approximately equally abundant, but the former is more important in term of carbon biomass. Despite the lack of a clear seasonal variation in Chl a concentration, primary productivity showed a large seasonal variation, and was lowest in winter and highest in spring. Seasonal succession in the phytoplankton community is also evident with the abundance of diatoms peaking in May, followed by picoeukaryotes and Synechococcus in summer. The growth of phytoplankton (especially >10 μm cell size) in the western subarctic Pacific is often limited by iron bioavailability, and microzooplankton grazing keeps the standing stock of pico- and nano-phytoplankton low. Compared to the other HNLC regions (the eastern equatorial Pacific, the Southern Ocean, and the eastern subarctic Pacific), iron limitation in the Western Subarctic Gyre (WSG) may be less severe probably due to higher iron concentrations. The Oyashio region has similar physical condition, macronutrient supply and phytoplankton species compositions to the WSG, but much higher phytoplankton biomass and primary productivity. The difference between the Oyashio region and the WSG is also believed to be the results of difference in iron bioavailability in both regions. This revised version was published online in July 2006 with corrections to the Cover Date.     

Sublittoral meiofauna with particular reference to nematodes in the southern Yellow Sea, China

Densities of major meiofaunal taxa were investigated at 34 sampling stations during six cruises by R/V Beidou to the southern Yellow Sea, China from 2000 to 2004, and the community structure of free-living marine nematodes was studied during one of the cruises in 2003. Meiofauna abundance ranged from 487.4 to 1655.3 individuals per 10 cm². Nematodes and harpacticoid copepods were the two most dominant groups, contributing 73.8–92.8% and 3.5–18.7%, respectively, to the total meiofauna abundance. One-way ANOVA showed no significant annual fluctuation of meiofauna and nematode abundances from 2000 to 2004 in the southern Yellow Sea. However, two-way ANOVA based on six stations sampled in 4 years (2001–2004) showed that there were significant differences among the six stations and the 4 sampling years for meiofauna, nematode and copepod abundance. Correlation analysis demonstrated that meiofauna abundance was mainly linked to chloroplastic pigments. Other environmental factors could not be ruled out, however. A total of 232 free-living marine nematode species, belonging to 149 genera, 35 families and 4 orders, were identified. The dominant species in the sampling area were the following: Dorylaimopsis rabalaisi, Microlaimus sp.1, Prochromadorella sp., Promonohystera sp., Cobbia sp.1, Daptonema sp.1, Leptolaimus sp.1, Halalaimus sp.2, Aegialoalaimus sp., Chromadorita sp., Parodontophora marina, Parasphaerolaimus paradoxus, Quadricoma sp.1, Campylaimus sp.1, Halalaimus gracilis, Paramesacanthion sp.1, Paramonohystera sp.1, and Metalinhomoeus longiseta. CLUSTER and SIMPROF analyses revealed three main types of nematode community (or station groups) in the sampling area, including I: coastal community, II: transitory community between coastal and YSCWM (Yellow Sea Cold Water Mass), and III: YSCWM community. Each community was indicated by a number of dominant nematode species. Bio-Env correlation analysis between the nematode community and environmental variables showed that water depth, sediment water content, organic matter, chlorophyll a (Chl-a) and phaeophorbide a (Pha-a) were the most important factors to determine the community structure.     

Influence of stratification and irradiance regime on summer phytoplankton composition in coastal and shelf seas of the British Isles

The effect of interaction between stratification and irradiance regimes on phytoplankton community structure was investigated in three shelf/coastal regions of the British Isles, each of which displayed ranges of vertical stability and light attenuation. Relationships between vertical stability, light penetration and community structure were indicated by the ordination of dominance (assessed using cell volume) of the main phytoplankton phyletic groups—diatoms, dinoflagellates and microflagellates—on a surface defined by a bulk stratification index () and water column depth, scaled by transparency (λh). Diatom- and dinoflagellate-dominated communities occupied distinctly different domains on the - λh surface, diatoms being favoured in well-mixed water columns with high values for λh and dinoflagellates dominating where stratification was strong and λh was low. Microflagellates were not abundant in any of the study areas and showed no clear ordination on the - λh surface. The domain of co-dominance of diatom and dinoflagellates on the - λh surface was narrow with small changes in the irradiance or stratification regime resulting in a switch to diatom or dinoflagellate dominance. It is suggested that loss of non-motile diatom communities in strongly stratified water columns might be a strong selective force in favour of dinoflagel-lates. However, in water columns with intermediate stratification and optical properties, the outcome of competition may be decided by physiological attributes of the two groups with respect to growth in low and fluctuating irradiances.