基于GIS和生态位模型的西藏红豆杉遗传景观和物种分布格局（英文）

广泛分布于喜马拉雅山脉和我国华南地区的西藏红豆杉频临灭绝,揭示空间遗传结构和物种分布变化对于理解西藏红豆杉的进化过程及其物种保护尤为重要。基于西藏红豆杉48个种群的分子变异数据,利用反距离权重空间差值方法得到遗传多样性和遗传分化分布图,识别出6个遗传多样性和5个遗传分化高值区域,这些重点区域主要位于我国南方的几个山区,这些区域在未来应给予重点保护;基于Monmonier算法识别出4条地理隔离:东喜马拉雅山脉、横断山脉、云南高原和台湾海峡;利用生态位模型模拟三个历史时期的物种分布格局,从末次间冰期至末次冰盛期,物种经历一次向高原西部的面积扩张,这与典型的冰期物种退缩模式不同;末次冰盛期之后,物种面积逐渐缩小,呈现破碎化分布。因此,地理景观特征和第四纪气候波动对西藏红豆杉遗传结构和分布格局影响很大。     

龙须菜RSAP分析及其SCAR标记的转化

初步探讨限制性位点扩增多态性(Restriction site amplified polymorphism,RSAP)分子标记技术在龙须菜遗传多样性检测和种质鉴定上的应用。利用所优化的适合于龙须菜RSAP分析的PCR反应体系,对青岛湛山湾野生群体和栽培品系981、07-2进行遗传多样性分析和比较。试验采用15对引物组合在3个群体14个龙须菜个体中共扩增出669个位点,其中多态位点数为146个,多态性比例22%,平均每对引物产生10条多态性条带,片段大小在100~1 000 bp之间。湛山湾野生群体的Na(1.007 5)、Ne(1.007 1)、H(0.003 6)、I(0.005 1)与栽培品系981的Na(1.003 0)、Ne(1.002 1)、H(0.001 2)、I(0.001 8),以及栽培品系07-2的Na(1.009 0)、Ne(1.006 3)、H(0.003 7)、I(0.005 4)相比较可知3个群体的遗传多样性是有差异的。种群间的遗传多样性分析表明,在所有检测的样品中,遗传多样性多来自不同群体间的多样性。群体遗传结构分析表明,2个栽培品系981、07-2间遗传距离不大,但栽培品系与湛山湾野生群体间的遗传距离相对较大,而UPGMA聚类分析也明显的将湛山湾野生群体与栽培品系981、07-2区分开来,表明野生群体与栽培品系间已产生一定的遗传隔离。通过分析湛山湾野生群体及栽培品系981、07-2的RSAP指纹图谱,从中筛选栽培品系981的特异条带,并将其转化为稳定性好、特异性高的序列特征化扩增区(Sequence characterized amplified regions,SCAR)分子标记。     

中部太平洋大眼金枪鱼(Thunnus obesus)种群遗传结构的初步研究

大眼金枪鱼(Thunnus obesus)是世界最重要的渔业资源之一,经济价值较高,捕捞压力的加大使中部太平洋大眼金枪鱼过度捕捞程度愈发严重。开展种群遗传结构研究将为大眼金枪鱼资源的可持续利用与开发提供科学依据。本文以取自中西太平洋和中东太平洋共182尾大眼金枪鱼个体为研究对象,分析研究其线粒体DNA控制区第一个高变区(the first hypervariable region,HVR-1)457bp的序列,共发现115个变异位点,定义了178种单倍型。序列多样性分析结果显示:8个采样点核苷酸多样性在0.03074—0.04362之间,单倍型多样性在各个采样点都较高,变动范围在0.996—1.000之间;分子方差分析显示99.97%的遗传变异性来自于种群内;群体间的高基因交流值Nm和低分化指数Fst揭示中东太平洋与中西太平洋群体间基因交流频繁,不存在显著的遗传分化。     

基于遗传小波神经网络的海底声学底质识别分类

分割海底声纳探测图像,提取单元特征向量进行主成份分析,选取均值、标准差、对比度、相关系数、能量及同质性作为训练特征向量,构建小波神经网络。利用遗传算法优化小波神经网络的初始权值及小波参数,对砂、礁石、泥3种底质类型分别进行训练,并得到3种底质的测试精度都在90%以上,优于单独利用小波神经网络进行训练时的测试精度,克服了小波神经网络训练时易陷入局部极小的固有缺陷,表明基于遗传算法的小波神经网络可有效用于海底底质声纳图像的识别和分类。     

中国近海浮游桡足类中华哲水蚤（Calanussinicus Brodsky）的分子系统地理学和种群遗传结构研究

Planktonic copepod Calanus sinicus is the dominant meso-zooplankton in the Northwest Pacific Ocean. To better understand its population dynamics and phylogeographic patterns, 243 C. sinicus individuals were collected from seven locations across the shelf waters of China and its population genetics was studied by mitochondrial DNA cytochrome oxidase I(mtCOI) sequences analyses. Thirty-nine different sequences, or haplotypes, were detected with moderate haplotype diversity(h=0.749) and low nucleotide diversity(π=0.003) for all populations. The evolutionary divergence between geographic populations varied from 0.24% to 0.37%, indicative of very limited genetic differentiation. Visualized minimum spanning network(MSN) and phylogenetic analysis of all the detected haplotypes did not reveal any clear phylogeographic pattern. Furthermore, AMOVA data showed no significant spatial population differentiation existed among the individuals collected across China shelf waters. Pairwise FST values showed that population collected from northwest of the East China Sea(ECS) displayed a low difference to other populations. Mismatch distribution analyses and neutrality tests indicated that C. sinicus might undergo a demographic/population expansion. No significant population genetic structuring was detected, indicating an extensive gene flow among the C. sinicus populations. Our results provide molecular evidence for the hypothesis that C. sinicus in the northwestern South China Sea in winter is transported from the East China Sea and the Yellow Sea by the China Coastal Current during the northeast monsoon period.     

Genetic parameter estimation for juvenile growth and upper thermal tolerance in turbot (Scophthalmus maximus Linnaeus)

Twenty-six half-sib groups(53 full-sib families) of turbot, Scophthalmus maximus Linnaeus, were obtained by artificial insemination. We measured growth in the offspring(40–50 individuals/family) and subjected them to a thermal tolerance challenge over a period of 34 d. There was no significant difference in daily mortality(range: 0.580%–1.391%) between Days 1–13 during the thermal tolerance challenge. However, daily cumulative mortality increased rapidly between Days 14 and 29, especially on Days 15 and 16(20.232% and 34.377%, respectively). Mortality was highest on Day 16(14.145%). We estimated the genetic parameters using the average information restricted maximum likelihood method. We used a likelihood ratio test to evaluate the significance of effects in models with and without identity as an effect, and compared the final log-likelihoods(maximum log L). Lastly, we estimated phenotypic and genetic correlation between the upper thermal tolerance limit(UTT) and body weight(BW). In this study, the positive phenotypic correlation was low between UTT and BW(0.093±0.029). The genetic correlation between UTT and BW was negative(-0.044±0.239). The heritability for upper thermal tolerance was low(0.087±0.032), which is of approximately moderate heritability. The heritability for body weight was high(0.303±0.074). Our results suggest there is significant potential for improvement in the culture of turbot by selective breeding.     

山东沿海菲律宾蛤仔不同地理群体遗传多样性的AFLP 分析

利用AFLP技术对山东沿海菲律宾蛤仔(Ruditapes philippinarum)4个野生群体(乳山、无棣、牟平、即墨)进行了遗传多样性分析。采用6对引物组合对4个群体进行扩增,共得到356个位点,乳山群体、无棣群体、牟平群体和即墨群体的多态位点比例依次为74.40%、70.50%、72.80%、74.70%,具有较高的遗传多样性水平。其中,即墨群体多态性比例最高,无棣群体多态性比例最低。聚类分析表明,各群体间的遗传距离为0.0263~0.0448,乳山群体和无棣群体间的遗传距离最近(0.0263),两群体首先聚在一起,随后与牟平群体和即墨群体聚在一起。     

牡蛎的遗传育种研究进展

牡蛎肉味鲜美，营养丰富，是世界重要海水贝类养殖对象之一。随着各种生物技术在水产领域的广泛应用，牡蛎的遗传育种工作也备受重视，尤其自Stanley首次人工诱导美洲牡蛎(Crassostrea virginica)三倍体成功以来，大大加快了对牡蛎的遗传学背景和育种进程的研究步     

光温敏雄性不育小麦的研究进展

何觉民等首先提出了改变小麦品种播种期、播种地获得雄性不育，用于生产杂交种的方法，并在贵农14中找到不育株，育成ES-3、ES-4、ES-5，从小偃、栽培二粒与普通小麦杂交后代中，获得一批不育株，育成一系列光温敏不育系。谭昌华等从栽培二粒小麦与普通小麦的杂交后代中，获得不育株，育成温光型雄性不育小麦CA9S,