Similarity of electrophoretic dissolved protein spectra from coastal to pelagic seawaters

Dissolved proteins in seawater samples collected from a coastal area of Tokyo Bay, Sagami Bay and a location off the Kuroshio Current were investigated by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and high resolution two-dimensional electrophoresis (2-DE). Four to nine protein bands were detected in SDS-PAGE in the apparent molecular weight (MW) range from 12 kilo Dalton (kDa) to 49 kDa. The 2-DE technique distinguished 10 to 46 protein spots exhibiting isoelectric point (pI)/MW ranging 4.3–9.2/12–63 kDa. The elecrophoretic patterns were similar between the coastal and pelagic samples, as well as previously reported patterns from various pelagic areas. The close similarity of electrophoretic mobility on both SDS-PAGE and 2-DE gels indicates the compositional homogeneity of dissolved proteins in seawater throughout a broad range of marine environments. Proteinaceous dissolved organic matter (DOM) that was unresolved and smeared staining characteristics on both SDS-PAGE and 2-DE gels was first observed in Tokyo Bay waters in the present study and its possible sources are discussed. Although the two protein species, 48 kDa and 39 kDa proteins, have been identified as homologues of Porin P and low molecular weight-alkaline phosphatase of Pseudomonas aeruginosa PAO1, respectively, four strains of P. aeruginosa and two species of Pseudomonas spp. have been newly identified as the source organisms of these proteins using the N-terminal amino acid sequence data determined in previous studies.     

Diatoms grow faster using ammonium in rapidly flushed eutrophic Dokai Bay,Japan

The importance of the nitrogen source for phytoplankton growth in a highly eutrophic embayment, Dokai Bay, was investigated. The DIN concentration often exceeded 100 μM of which 40–70% was NH₄ ⁺. During two incubation experiments, the natural assemblage of mainly diatoms took up NH₄ ⁺ instead of NO₃ ⁻. The growth of two Skeletonema species isolated in Dokai Bay were significantly faster on NH₄ ⁺ (1.86 and 1.27 div. d⁻¹ respectively) than on NO₃ ⁻ (1.55 and 1.04 div. d⁻¹ respectively). Our results indicated that these diatoms could grow faster by using NH₄ ⁺ compared to NO₃ ⁻ in this eutrophic bay.     

GeoSurveillance: a GIS-based system for the detection and monitoring of spatial clusters

This article introduces a software package named GeoSurveillance that combines spatial statistical techniques and GIS routines to perform tests for the detection and monitoring of spatial clustering. GeoSurveillance provides both retrospective and prospective tests. While retrospective tests are applied to spatial data collected for a particular point in time, prospective tests attempt to incorporate the dynamic nature of spatial patterns via analyzing time-series data to detect emergent clusters as quickly as possible. This article will outline the structure of GeoSurveillance as well as describe the statistical cluster detection methods implemented in the software. It concludes with an illustration of the use of the software to analyze the spatial pattern of low birth weights in Los Angeles County, California.      

Characteristics of ionic components in precipitation in Kitakyushu City,Japan

Precipitation samples were collected by filtrating bulk sampler in Kitakyushu City, Japan, from January 1988 to December 1990. Volume weighted annual mean of pH was 4.93, but the pH distribution indicated that most probable value lay in the range pH 6.0–6.4. Volume weighted annual mean concentrations of major ionic components were as follows; SO ₄ ^2– : 84.2, NO ₃ ^– : 28.1, Cl^–: 86.3, NH ₄ ⁺ : 45.5, Ca²⁺: 63.3, Mg²⁺: 27.0, K⁺: 3.4, Na⁺: 69.0 µ eq l^–1. The highest concentrations of these ionic components were observed in winter and the lowest occurred in the rainy season. The ratio of ex-SO ₄ ^2– /NO ₃ ^– exhibited the lowest ratio in summer, and the highest ratio in winter. Good correlations were obtained between Cl^– and Na⁺, ex-SO ₄ ²⁺ and ex-Ca²⁺, NO ₃ ^– and ex-Ca²⁺, and NH ₄ ⁺ and ex-SO ₄ ^2– , respectively. However, no correlation between Cl^– and Na⁺ with Ca²⁺ was observed. The relationship of H⁺ with (ex-SO ₄ ^2– + NO ₃ ^– ) - (ex-Ca²⁺ + NH ₄ ⁺ ) indicated positive correlation.     

Seismic-response-controlled structure with active mass driver system. Part 2: Verification

An Active Mass Driver (AMD) system is proposed to suppress actively the response of a building to irregular external excitations such as earthquakes and typhoons.¹ This system has been introduced to an actual ten-storey office building constructed in Tokyo in August, 1989. The proposed analytical methods utilize circuits of the system and mechanical characteristics to understand the real control effect of the system. Simulation analyses are also performed to verify the analytical model and the control effect during observed earthquakes.     

Origin of sector trilling in cordierite in Daimonji hornfels,Kyoto, Japan

Sector trilling of cordierite in hornfels in the inner part of a contact aureole at Daimonji, Japan is a new type which consists not only of six (100) sectors (a-sectors) forming trilling, but also of (001) sectors (c-sectors) and high-index sectors (h-sectors). Complex twins within and among these sectors were studied from a viewpoint of a pseudo twin. The complex texture originated from both growth and transformation processes. The c-sector consists of three groups of domains which are related by a pseudo twin. This intrasector pseudo twin indicates that the initial phase of the c-sector was hexagonal cordierite (indialite) which later transformed to orthorhombic. The a-sector is related to adjacent sectors by a rotation of 120° around the c axis, resulting in an intersector pseudo twin. The a-sector is interpreted to have formed by overgrowth of orthorhombic cordierite on prism faces of indialite. The h-sector with the dendritic texture is also interpreted to have grown as orthorhombic cordierite. In hornfels in the middle part of the aureole, cordierites with sector trilling often coexist with single crystals of cordierite, and the sector trilling has no c- and h-sectors. This trilling type suggests that nucleation of indialite was subsequently followed by growth of orthorhombic cordierite in its stable field.     

Carbonate deposits on submerged seamounts in the northwestern Pacific Ocean

Abstract   The lithology of shallow-water carbonates collected from 19 sites on 16 seamounts in six areas of the northwestern Pacific Ocean using the Deep-sea Boring Machine System are described. The areas include the Amami Plateau, Daito Ridge, Oki-Daito Ridge, Urdaneta Plateau, Kyushu-Palau Ridge and Ogasawara Plateau. Chronological constraint is provided by calcareous nannofossil biostratigraphy, planktonic foraminiferal biostratigraphy, larger foraminiferal biostratigraphy and strontium (Sr) isotope stratigraphy. Large amounts of shallow-water carbonates accumulated on the seamounts during the Oligocene, a relatively cool period, whereas limited carbonate deposits formed during the Early Miocene, a relatively warm period. This might indicate that deposition of shallow-water carbonates on seamounts in the northwestern Pacific Ocean was not necessarily controlled by climatic conditions, but was related to volcanism and tectonics that served as foundations for reef/carbonate-platform formation. Remarkable differences in biotic composition exist between Cretaceous and Cenozoic shallow-water carbonates. Late Cretaceous shallow-water carbonates are distinguished by the occurrence of rudists, solenoporacean algae and microencrusters. Middle Eocene to Early Oligocene shallow-water carbonates are dominated by Halimeda or nummulitid and discocyclinid larger foraminifers. Scleractinian corals became common from the Oligocene onward. Nongeniculate coralline algae and larger foraminifers were common to abundant throughout the Eocene to the Pleistocene. The replacement of major carbonate producers in the shallow-water carbonate factory during post-Cretaceous time is in accordance with previous studies and is considered to reflect a shift in seawater chemistry.     

Pb and Th in settling particles in the western Northwest Pacific Ocean: Particle flux and scavenging

A mooring of three conical time-series sediment traps was deployed at two sites in the western Northwest Pacific Ocean for 9 months. Total mass fluxes and activities of ²¹⁰Pb and ²³⁰Th were determined for the settling particles to elucidate their scavenging and transport processes. Sediment samples also were analyzed for ²¹⁰Pb activities. Total mass fluxes, ²¹⁰Pb fluxes and ²³⁰Th fluxes showed large seasonal variations and their weighted mean fluxes tended to increase with depth, with an especially large increase near-bottom. The ratios of the observed ²¹⁰Pb fluxes to the ²¹⁰Pb deficiency fluxes in the upper traps at the two sites were only 0.02 and 0.12, and were attributable to advective export of ²¹⁰Pb from the surface waters. Those ratios in the near-bottom traps ranged between 1.22 and 2.63. This suggests that these high ratios are due to effective particle scavenging, large lateral ²¹⁰Pb import and input of resuspended particles that have not become incorporated into the sediments. The mean total ²³⁰Th fluxes at the near-bottom traps were 4.2–6.7 times higher than that expected from production in the overlying water column. The ²¹⁰Pb activities in the surficial sediments were much lower than those in the near-bottom traps. The ²¹⁰Pb accumulation rates estimated from the excess ²¹⁰Pb inventory in the sediment column were 40–70% higher than the mean ²¹⁰Pb fluxes at the near-bottom traps. The ratios of the ²¹⁰Pb accumulation rates to the ²¹⁰Pb deficiency fluxes at the near-bottom traps ranged between 2.0 and 3.7. The high fluxes of particulate ²¹⁰Pb and ²³⁰Th at the near-bottom traps reflected a combination of enhanced scavenging of dissolved nuclides and the lateral redistribution of particulate matter by downslope and alongshore transports. However, it was not possible to discriminate among the various processes contributing to high nuclide fluxes.     

A New Coastal Marine Ecosystem Model Study Coupled with Hydrodynamics and Tidal Flat Ecosystem Effect

A new coastal marine ecosystem model was developed, which was composed of pelagic and benthic ecosystems, and was applied to Mikawa Bay, Japan. This model deals with variations of biochemical and physical interactions among dissolved oxygen and C–N–P species (composition formed out of carbon, nitrogen and phosphorus elements) so that it resolves the flux dynamics of carbon, nitrogen, phosphorus and oxygen elements. The physical and biochemical mechanism figured in this model is constructed for the purpose of simulating the estuarine lower trophic ecosystem, in areas where the sea was too deep for light to reach the sea-bottom. As a result of coupling the benthic with pelagic system, the effect of process of sedimentation and nutrient diffusion back to the pelagic system could be indicated. In addition, by implementing the tidal flat ecosystem model's calculation result, the integrated model can include the effect of water purification in tidal flats where the light can reach the sea-bottom, and where sea-weed, sea grass and benthic algae exist. In this study, the model indicates that oxygen-depleted water exists at the sea-bottom especially in summer mainly caused by an increase of oxygen consumption in the benthic system and a decrease of the vertical mixing water process. Furthermore, by comparing the case – with the tidal flat ecosystem model and the case without it, the effect of water purification of tidal flat estuaries was indicated. From the viewpoint of a short time scale, the tidal flat has the potential to restrict red tide (rapid increase of phytoplankton), and from the viewpoint of a long time scale, it restricts the sedimentation of detritus. Restricting the sedimentation prevents oxygen-depleted water occurring in the coastal marine system of Mikawa Bay.     

A four-component decomposition of POLSAR images based on the coherency matrix

A four-component decomposition scheme of the coherency matrix is presented here for the analysis of polarimetric synthetic aperture radar (SAR) images. The coherency matrix is used to deal with nonreflection symmetric scattering case, which is an extension of covariance matrix approach. The same decomposition results have been obtained. The advantage of this approach is explicit expressions of four scattering powers in terms of scattering matrix elements, which serve the interpretation of polarimetric SAR data quantitatively.