A wave model for the Great Barrier Reef

A new wind wave generation model, WAMGBR, is presented that has been adapted from WAM especially for use in the complex geometry of the Great Barrier Reef. A technique (reef parameterization) has been presented that incorporates sub-grid scale dissipation caused by coral reefs. Three other improvements to WAM have been proposed. An explicit/implicit finite difference scheme has been implemented that allows for more efficient modelling (longer time steps) while maintaining diffusive characteristics that are at least as good as those of WAM. An offset in discrete angles creates more uniform diffusive characteristics. And, a transformed spherical coordinate system allows for more efficient grid sizes and smaller grid dependent refraction. Comparisons between modelling techniques and between model and measured data show that WAMGBR produces very good results in the difficult challenge of modelling both non-cyclonic and tropical cyclone waves in the geographically complex environment of the Great Barrier Reef.     

Sampling the vertical particle flux in the upper water column using a large diameter free-drifting NetTrap adapted to an Indented Rotating Sphere sediment trap

Further development of the large, surface-tethered sediment trap (NetTrap) employed as part of the MedFlux program is described whereby the large collection capacity of the NetTrap is combined with an Indented Rotating Sphere/Sample Carousel (IRSC) sediment trap (IRSC–NT). This trap is capable of collecting particle flux either in a time series or settling velocity mode; settling velocity mode allows the collection of particles that fall within discrete settling velocity intervals. During short field deployments in the Mediterranean Sea the IRSC–NT configured in the settling velocity mode successfully collected unpoisoned samples for chemical and microbiological experiments. In addition to the development of the IRSC–NT, particle-settling behavior above and below the swimmer-excluding IRS valve was tested during on-deck experiments using a specially constructed water-tight trap. Chemical analyses of settling materials (published elsewhere) suggested that separation of particles by settling velocity was achieved. However, due to the motion of the ship, it was not possible to directly measure particle-settling velocities within the trap. Particle release from the IRS did not bias the apparent settling velocity spectrum. Rotation of the IRS did not engender turbulence at the surface of the sphere or within the skewed funnel below. Tests of different ball designs over the course of the MedFlux program showed that a “ridge and saddle” pattern was optimal for efficiently transferring particles under the IRS seal while still reducing swimmer entrance to the collection funnel. The large size of the IRSC–NT did not prevent it from drifting effectively with the current. Several modifications of the present design are proposed that should improve the accuracy of the settling velocity measurements.     

MedFlux: Investigations of particle flux in the Twilight Zone

The MedFlux project was devised to determine and model relationships between organic matter and mineral ballasts of sinking particulate matter in the ocean. Specifically we investigated the ballast ratio hypothesis, tested various commonly used sampling and modeling techniques, and developed new technologies that would allow better characterization of particle biogeochemistry. Here we describe the rationale for the project, the biogeochemical provenance of the DYFAMED site, the international support structure, and highlights from the papers published here. Additional MedFlux papers can be accessed at the MedFlux web site (http://msrc.sunysb.edu/MedFlux/).     

Geophysical surveys of the sediments of Loch Ness,Scotland: implications for the deglaciation of the Moray Firth Ice Stream,British–Irish Ice Sheet

We present results from three geophysical campaigns using high‐resolution sub‐bottom profiling to image sediments deposited in Loch Ness, Scotland. Sonar profiles show distinct packages of sediment, providing insight into the loch's deglacial history. A recessional moraine complex in the north of the loch indicates initial punctuated retreat. Subsequent retreat was rapid before stabilisation at Foyers Rise formed a large stillstand moraine. Here, the calving margin produced significant volumes of laminated sediments in a proglacial fjord‐like environment. Subsequent to this, ice retreated rapidly to the southern end of the loch, where it again deposited a sequence of proglacial laminated sediments. Sediment sequences were then disturbed by the deposition of a thick gravel layer and a large turbidite deposit as a result of a jökulhlaup from the Spean/Roy ice‐dammed lake. These sediments are overlain by a Holocene sheet drape. Data indicate: (i) a former tributary of the Moray Firth Ice Stream migrated back into Loch Ness as a major outlet glacier with a calving margin in a fjord‐like setting; (ii) there was significant sediment supply to the terminus of this outlet glacier in Loch Ness; and (iii) that jökulhlaups are important for sediment supply into proglacial fjord/lake environments and may compose >20% of proglacial sedimentary sequences. Copyright © 2011 John Wiley & Sons, Ltd.     

Photosynthesis-irradiance relationships for three species of submersed macrophytes in the tidal freshwater Hudson River

Net photosynthesis under a range of natural light intensities was determined for three common macrophytes of the tidal freshwater Hudson River:Vallisneria americana Michx.,Potamogeton perfoliatus L., andMyriophyllum spicatum L. Light-saturated net photosynthetic rates did not differ among species, nor were there differences among species in the light intensity at which respiration balanced photosynthesis. The initial slope (α) of the photosynthesis-irradiance (P-I) curve was greater forV. americana than the other two species. As a result, maximum photosynthetic rates were reached inV. americana at significantly lower irradiances than those required to saturate photosynthesis inP. perfoliatus andM. spicatum. This characteristic would give this species a competitive advantage under conditions in which growth is limited by light availability. Macrophyte biomass distribution showed no clear correlation with depth.V. americana was the most abundant of the three species, both in frequency of occurrence and absolute biomass. The low irradiance required for the saturation of photosynthesis inV. americana may contribute to its predominance in the turbid Hudson River.     

A Preliminary Study of the Self-Directed Photography of Middle-Class,Homeless, and Mobility-Impaired Children*

Understanding the ways in which children with different life experiences come to terms with day-to-day contexts and constraints has become an important topic of social science research. This study applies the technique of auto-photography to the study of children-environment transactions. How children apprehend their environments is described through a leitmotif analysis and an interpretation of photographs taken by children from middle-class families, homeless children, and children whose mobility is impaired by cerebral palsy. We speculate upon the social and physical contexts of these children based upon the images that they selected to photograph. Although impressionistic, our findings suggest the importance of auto-photography as a method for uncovering children-environment transactions.