Blending single beam RoxAnn and multi-beam swathe QTC hydro-acoustic discrimination techniques for the Stonehaven area,Scotland, UK

Surface properties of the seabed in a 180 km² area of coastal waters (14–57 m depth) off northeast Scotland were mapped by hydro-acoustic discrimination using single and multi-beam echosounders linked to signal processing systems (RoxAnn for the single beam, and Questor Tangent Corporation (QTC) Multiview for the multibeam). Subsequently, two ground truthing surveys were carried out, using grab and TV sampling. The RoxAnn and QTC-Multiview outputs showed strong similarity in their classifications of seabed types. Classifications generated by QTC-Multiview were used to supervise those based on seabed roughness and hardness indices produced by the RoxAnn system and thereby develop a ‘blended’ map based on both systems. The resulting hydro-acoustic classes agreed well with a cluster analysis of data on sediment grain sizes from the grab sampling, and indicated that the area could be described by distinct regions of surface texture and surficial sediments ranging from muddy sand to boulders and rock.     

Numerical modelling of floodplain hydraulics and suspended sediment transport and deposition at the event scale in the middle river Elbe,Germany

The objective of this case study was to calibrate and verify detailed transport model of sediment in a 4‐kilometre stretch of the middle Elbe floodplains in Germany. The hydraulic RMA‐2 model and the SED2d‐WES sediment transport model were used. These models were calibrated and validated by detailed measurement of the surface water elevations, the velocities at six profiles, and the suspended sediment concentration and deposition (by means of 10 sediment traps). The flow was modelled for three steady‐state discharges. The surface water elevations were calculated to an accuracy of less than 5 cm compared to measurements. The differences between the calculated and measured velocities were with one exception smaller than 0.2 m/s (measured range 0.1…?1.0 m/s). An average sediment input of 35 g/(m² d) was calculated for the flood event studied. The highest calculated sedimentation rates of 700 g/(m² d) (dry density 90 kg/m³) occurred in quiescent zones and abandoned channels. Twenty‐five percent of the deposited sediment settled in the quiescent zones (which only account for 13% of the area). The most sensitive parameters of the sediment transport model were the settling velocity and critical shear stress. The modelling techniques used allowed sediment deposition on the floodplains of the Elbe to be realistically depicted.     

Quantifying Tidal Movements of the Shore Crab <Emphasis Type="Italic">Carcinus maenas</Emphasis> on to Complex Epibenthic Bivalve Habitats

Many subtidal predators undertake regular tidal migrations into intertidal areas in order to access abundant prey. One of the most productive habitats in soft bottom intertidal systems is formed by beds of epibenthic bivalves such as blue mussels (Mytilus edulis) and Pacific oysters (Crassostrea gigas). In the Dutch Wadden Sea, these bivalves might face substantial predation pressure by the shore crab (Carcinus maenas), which increased considerably in numbers during the last 20 years. However, the quantification of this species on bivalve beds is challenging, since most methods common for quantifying animal abundance in marine habitats cannot be used. This study investigated the potential of two methods to quantify the abundance of C. maenas on 14 epibenthic bivalve beds across the Dutch Wadden Sea. The use of the number of crabs migrating from subtidal towards intertidal areas as a proxy of abundance on bivalve beds yielded unreliable results. In contrast, crabs caught with traps on the beds were correlated with the abundance assessed on the surrounding bare flats by beam trawl and therefore provided usable results. The estimates, however, were only reliable for crabs exceeding 35 mm in carapace width (CW). The application of these estimates indicated that crab abundances on bivalve beds were influenced by the biogenic structure. Beds dominated by oysters attracted many large crabs (> 50-mm CW), whereas abundances of medium-sized crabs (35–50-mm CW) showed no relationship to the oyster occurrence. The combination of traps and trawls is capable of quantifying crab abundance on bivalve beds, which offers the possibility to study biotic processes such as predator-prey interactions in these complex structures in more detail.     

Quality assessment of the blue mussel (Mytilus edulis): Comparison between commercial and wild types

This study compared species identity, microplastics, chemical and microbial contamination between consumption mussels and wild type mussels, collected at Belgian department stores and Belgian groynes and quaysides, respectively. Species identification based on genetic analysis showed a high number of Mytilus (M.) edulis compared to M. galloprovincialis and M. edulis/galloprovincialis hybrid mussels. The number of total microplastics varied from 2.6 to 5.1 fibres/10 g of mussel. A higher prevalence of orange fibres at quaysides is related to fisheries activities. Chemical contamination of polycyclic aromatic hydrocarbons and polychlorobiphenyls could be related to industrial activities and water turbidity, with maximum concentrations at the quayside of port Zeebrugge. The inverse was noted for Escherichia coli contamination, which was relatively low at Zeebrugge quayside with a total count of 3.9 × 10² CFU/100 g tissue, due to limited agricultural effluents. Results of this complementary analysis stress the importance of integrated monitoring and quality assessment.     

Time-domain sparsity promoting least-squares reverse time migration with source estimation

Least-squares reverse-time migration is well known for its capability to generate artefact-free true-amplitude subsurface images through fitting observed data in the least-squares sense. However, when applied to realistic imaging problems, this approach is faced with issues related to overfitting and excessive computational costs induced by many wave-equation solves. The fact that the source function is unknown complicates this situation even further. Motivated by recent results in stochastic optimization and transform-domain sparsity promotion, we demonstrate that the computational costs of inversion can be reduced significantly while avoiding imaging artefacts and restoring amplitudes. While powerful, these new approaches do require accurate information on the source-time function, which is often lacking. Without this information, the imaging quality deteriorates rapidly. We address this issue by presenting an approach where the source-time function is estimated on the fly through a technique known as variable projection. Aside from introducing negligible computational overhead, the proposed method is shown to perform well on imaging problems with noisy data and problems that involve complex settings such as salt. In either case, the presented method produces high-resolution high-amplitude fidelity images including an estimate for the source-time function. In addition, due to its use of stochastic optimization, we arrive at these images at roughly one to two times the cost of conventional reverse-time migration involving all data.     

Reconstruction of food conditions for Northeast Atlantic bivalve species based on Dynamic Energy Budgets

Required assimilated energy to support observed growth was reconstructed for four common bivalve species (Mya arenaria, Cerastoderma edule, Mytilus edulis and Macoma balthica) from various Northeast Atlantic coastal areas, along the species distributional range. The approach applied was based on the Dynamic Energy Budget (DEB) theory whereby observed growth patterns in the field, in combination with prevailing temperatures, were used to reconstruct the average food intake experienced in the field scaled to the maximum possible. For all species, results suggest food limitation over the range of locations. In general, reconstructed food intake indicated better conditions for C. edule compared to the other species, while M. edulis presented the lowest food conditions in all the areas. Despite the indications for a latitudinal trend in primary production, no clear pattern or relationship between reconstructed food conditions and latitude was observed suggesting that any trend may be overruled by local conditions.     

Epi-benthic megafaunal zonation across an oxygen minimum zone at the Indian continental margin

The Arabian Sea oxygen minimum zone (OMZ) impinges upon the Indian continental margin at bathyal depths (150-1500 m) producing changes in ambient oxygen availability and sediment geochemistry across the seafloor. The influence of these environmental changes upon the epi-benthic megafaunal assemblage was investigated by video survey at six stations spanning the OMZ core (540 m), lower boundary (800-1100 m) and below the OMZ (2000 m), between September and November 2008. Structural changes in the megafaunal assemblage were observed across the six stations, through changes in both megafaunal abundance and lebensspuren (biogenic traces). Most megafauna were absent in the OMZ core (540 m), where the assemblage was characterised by low densities of fishes (0.02-0.03 m⁻²). In the lower OMZ boundary, megafaunal abundance peaked at 800 m, where higher densities of ophiuroids (0.20-0.44 m⁻²) and decapods (0.11-0.15 m⁻²) were present. Total abundance declined with depth between 800 and 2000 m, as the number of taxa increased. Changes in the megafaunal assemblage were predicted by changes in abundance of seven taxonomic groups, correlated to both oxygen availability and sediment organic matter quality. Lebensspuren densities were highest in the OMZ boundary (800-1100 m) but traces of large infauna (e.g., echiurans and enteropneusts) were only observed between 1100 and 2000 m station, where the influence of the OMZ was reduced. Thus, changes in the megafaunal assemblage across the Indian margin OMZ reflect the responses of specific taxa to food availability and oxygen limitation.     

Structural modifications of vitrinite and alginite concentrates during pyrolitic maturation at different heating rates. A combined infrared, C NMR and microscopical study

Immature vitrinite samples from a Miocene lignite seam of western Germany (H/C = 1.14, O/C = 0.41) and alginite concentrates from a Tasmanite deposit of Australia (H/C = 1.60, O/C = 0.10) were pyrolyzed in a stream of argon at heating rates of 0.1 and 2.0°C/min up to temperatures varying from 200 to 670°C. The solid maceral residues were subjected to elemental and microscopical analysis and studied by IR and ¹³C CP/MAS NMR spectroscopy with respect to structural modifications.The maximum pyrolytic weight loss amounts to 60% of the initial organic matter in the case of vitrinite and to 85% for alginite, the onset of degradation reactions being shifted to higher temperatures with increasing rate of heating. Both infrared and NMR spectra of the vitrinite samples indicate a rapid decomposition of the cellulose component upon heating whereas lignin related structures such as aromatic ether linkages remain remarkably stable. The main hydrocarbon release from vitrinite occurs at very early evolution stages (T_max = 296°C, R_m = 0.20% at 0.1°C/min; T_max = 337°C, R_m = 0.23 at 2.0°C/min). Hydrocarbon generation from alginite requires higher temperatures (T_max = 388 and 438°C) and is completed within a distinctly narrower temperature range.The pronounced increase of vitrinite reflectance between 350 and 670°C seems to be associated with a rather time-consuming reorganization of the residual organic material. The concomitant growth of polyaromatic units is illustrated by the increasing intensity ratio of the aromatic ring stretching vibration bands at 1600 and 1500 cm⁻¹. These reactions are moreover marked by increasing loss of phenolic oxygen and by increasing conversion of aliphatic carbon into fixed aromatic carbon.