Evaluating Quaternary dating methods: Radiocarbon,U-series,luminescence, and amino acid racemization dates of a late Pleistocene emu egg

A whole emu egg, with infilling sediment believed to be coeval with egg laying and burial, was found in late Pleistocene lunette sediments near Lake Eyre, central Australia. The stratigraphic context and initial amino acid racemization (AAR) results suggested an age between 25 ka and 35 ka, ideal for a multiple cross-dating comparison. The sediment infilling the egg provided material for luminescence dating that minimized problems of association. Age estimations from AAR, ¹⁴C and U series methods were obtained from the eggshell and optically stimulated luminescence (OSL) of the infilling sediment. All methods agreed within their respective dating uncertainties confirming the utility of all four methods. They indicate an age for the emu egg of 31.24 ± 0.34 ka.     

An Intercomparison of Large-Eddy Simulations of the Stable Boundary Layer

Results are presented from the first intercomparison of large-eddy simulation (LES) models for the stable boundary layer (SBL), as part of the Global Energy and Water Cycle Experiment Atmospheric Boundary Layer Study initiative. A moderately stable case is used, based on Arctic observations. All models produce successful simulations, in as much as they generate resolved turbulence and reflect many of the results from local scaling theory and observations. Simulations performed at 1-m and 2-m resolution show only small changes in the mean profiles compared to coarser resolutions. Also, sensitivity to subgrid models for individual models highlights their importance in SBL simulation at moderate resolution (6.25 m). Stability functions are derived from the LES using typical mixing lengths used in numerical weather prediction (NWP) and climate models. The functions have smaller values than those used in NWP. There is also support for the use of K-profile similarity in parametrizations. Thus, the results provide improved understanding and motivate future developments of the parametrization of the SBL.     

Limited differences among habitats in deep‐sea macro‐infaunal communities off New Zealand: implications for their vulnerability to anthropogenic disturbance

The spread of human activities into the deep sea may pose a high risk to benthic communities and affect ecosystem integrity. The deep sea is characterized by physical and biological heterogeneity and different habitat types are likely to differ in their vulnerability to anthropogenic impacts. However, across‐habitat comparisons are rare, and no comprehensive ecological risk assessment has yet been developed. To address this gap in our knowledge, we compared macro‐infaunal community structure in four habitats (slope, canyons, seamounts and methane seeps) at depths between 700 and 1500 m in the Hikurangi Margin and Bay of Plenty regions off New Zealand. The most striking contrast in community structure was between the two study regions, due to an order of magnitude difference in macro‐infaunal abundance that we believe was caused by differences in surface productivity and food availability at the sea bed. We found differences in structural and functional attributes of macro‐infaunal communities among some habitats in the Hikurangi Margin (slope, canyon and seep), but not in the Bay of Plenty. We posit that differences between canyon and slope communities on the Hikurangi Margin are due to enhanced food availability inside canyons compared with adjacent slope habitats. Seep communities were characterized by elevated abundance of both symbiont‐bearing and heterotrophic taxa, and were the most distinct, and variable, among the habitats that we considered on the Hikurangi Margin. Communities of seamounts were not distinct from slope or canyon communities on the Hikurangi Margin, probably reflecting similar environmental conditions in these habitats. The communities of deep‐sea canyon and seep habitats on the Hikurangi Margin were sufficiently dissimilar from each other and from slope habitats to warrant separate management consideration. By contrast, the low dissimilarity between communities of canyon and slope habitats in the Bay of Plenty suggests that habitat‐based management is not required in this region, for macro‐infauna at least. Although the two study regions share similar species pools, populations of the Hikurangi Margin region may be less vulnerable than the sparser populations of the Bay of Plenty due to the higher availability of potential colonizers and faster population growth. Thus regions, and habitats in some regions, should be subject to separate ecological risk assessment to help identify the key risks and consequences of human activities, and to inform options for reducing or mitigating impacts.     

Integrating process‐based flow and temperature models to assess riparian forests and temperature amelioration in salmon streams

The importance of riparian tree cover in reducing energy inputs to streams is increasingly recognized in schemes to mitigate climate change effects and protect freshwater ecosystems. Assessing different riparian management strategies requires catchment‐scale understanding of how different planting scenarios would affect the stream energy balance, coupled with a quantitative assessment of spatial patterns of streamflow generation. Here, we use the physically based MIKE SHE model to integrate simulations of catchment‐scale run‐off generation and in‐stream hydraulics with a heat transfer model. This was calibrated to model the spatio‐temporal distribution of hourly stream water temperature during warm low flow periods in a Scottish salmon stream. The model was explored as a “proof of concept” for a tool to investigate the effects of riparian management on high stream water temperatures that could affect juvenile Atlantic salmon. Uncertainty was incorporated into the assessment using the generalized likelihood uncertainty estimation approach. Results showed that by decreasing both the warming (daylight hours) and the cooling (night‐time hours) rates, forest cover leads to a reduction of the temperature range (with a delay of the time to peak by up to 2 hr) and can therefore be effectively used to moderate projected climate change effects. The modelling presented here facilitated the quantification of potential mitigating effects of alternative riparian management strategies and provided a valuable tool that has potential to be utilized as an evidence base for catchment management guidance.     

Metrics to assess how longitudinal channel network connectivity and in‐stream Atlantic salmon habitats are impacted by hydropower regulation

Habitat fragmentation in channel networks and riverine ecosystems is increasing globally due to the construction of barriers and river regulation. The resulting divergence from the natural state poses a threat to ecosystem integrity. Consequently, a trade‐off is required between the conservation of biodiversity in channel networks and socio‐economic factors including power generation, potable water supplies, fisheries, and tourism. Many of Scotland's rivers are regulated for hydropower generation but also support populations of Atlantic salmon (Salmo salar L.) that have high economic and conservation value. This paper investigates the use of connectivity metrics and weightings to assess the impact of river barriers (impoundments) associated with hydropower regulation on natural longitudinal channel connectivity for Atlantic salmon. We applied 2 different weighting approaches in the connectivity models that accounted for spatial variability in habitat quality for spawning and fry production and contrasted these models with a more traditional approach using wetted area. Assessments of habitat loss using the habitat quality weighted models contrasted with those using the less biologically relevant wetted area. This highlights the importance of including relevant ecological and hydrogeomorphic information in assessing regulation impacts on natural channel connectivity. Specifically, we highlight scenarios where losing a smaller area of productive habitat can have a larger impact on Atlantic salmon than losing a greater area of less suitable habitat. It is recommended that future channel connectivity assessments should attempt to include biologically relevant weightings, rather than relying on simpler metrics like wetted area which can produce misleading assessments of barrier impacts.     

Sedimentology of the continental end‐Permian extinction event in the Sydney Basin,eastern Australia

Upper Permian to Lower Triassic coastal plain successions of the Sydney Basin in eastern Australia have been investigated in outcrop and continuous drillcores. The purpose of the investigation is to provide an assessment of palaeoenvironmental change at high southern palaeolatitudes in a continental margin context for the late Permian (Lopingian), across the end‐Permian Extinction interval, and into the Early Triassic. These basins were affected by explosive volcanic eruptions during the late Permian and, to a much lesser extent, during the Early Triassic, allowing high‐resolution age determination on the numerous tuff horizons. Palaeobotanical and radiogenic isotope data indicate that the end‐Permian Extinction occurs at the top of the uppermost coal bed, and the Permo‐Triassic boundary either within an immediately overlying mudrock succession or within a succeeding channel sandstone body, depending on locality due to lateral variation. Late Permian depositional environments were initially (during the Wuchiapingian) shallow marine and deltaic, but coastal plain fluvial environments with extensive coal‐forming mires became progressively established during the early late Permian, reflected in numerous preserved coal seams. The fluvial style of coastal plain channel deposits varies geographically. However, apart from the loss of peat‐forming mires, no significant long‐term change in depositional style (grain size, sediment‐body architecture, or sediment dispersal direction) was noted across the end‐Permian Extinction (pinpointed by turnover of the palaeoflora). There is no evidence for immediate aridification across the boundary despite a loss of coal from these successions. Rather, the end‐Permian Extinction marks the base of a long‐term, progressive trend towards better‐drained alluvial conditions into the Early Triassic. Indeed, the floral turnover was immediately followed by a flooding event in basinal depocentres, following which fluvial systems similar to those active prior to the end‐Permian Extinction were re‐established. The age of the floral extinction is constrained to 252.54 ± 0.08 to 252.10 ± 0.06 Ma by a suite of new Chemical Abrasion Isotope Dilution Thermal Ionization Mass Spectrometry U‐Pb ages on zircon grains. Another new age indicates that the return to fluvial sedimentation similar to that before the end‐Permian Extinction occurred in the basal Triassic (prior to 251.51 ± 0.14 Ma). The character of the surface separating coal‐bearing pre‐end‐Permian Extinction from coal‐barren post‐end‐Permian Extinction strata varies across the basins. In basin‐central locations, the contact varies from disconformable, where a fluvial channel body has cut down to the level of the top coal, to conformable where the top coal is overlain by mudrocks and interbedded sandstone–siltstone facies. In basin‐marginal locations, however, the contact is a pronounced erosional disconformity with coarse‐grained alluvial facies overlying older Permian rocks. There is no evidence that the contact is everywhere a disconformity or unconformity.     

Resolution Sensitivity and Scaling of Large-Eddy Simulations of the Stable Boundary Layer

Large-eddy simulations (LES) of the continuously turbulent quasi-equilibrium stable boundary layer (SBL) are conducted with grid lengths in the range of 12.5 m to 2 m, in order to explore resolution sensitivity, and determine at what point grid convergence occurs. The structure of the mean potential temperature, winds, and turbulent fluxes varies significantly over this resolution range. The highest resolution simulations show a significant degree of convergence. The dimensionless momentum diffusivity asymptotes to a value of 0.06, corresponding to a limiting flux Richardson number of 0.15.Using the converged simulations, some scaling hypotheses underpinning first-order and second-order closure models are revisited. The effective Richardson number stability functions of the LES are compared with the forms often used in numerical weather prediction (NWP). The mixing implied by the LES is less than that used in NWP. The commonly used similarity profiles for heat and momentum fluxes, and the scalings for dissipation and pressure covariances are compared with the LES. This information could provide guidance for the next generation of SBL parametrization schemes.     

Source and supply of sediment to a shoreline salient in a fringing reef environment

Reef-associated landforms are coupled to the health of the reef ecosystem which produces the sediment that forms and maintains these landforms. However, this connection can make reef-fronted coastlines sensitive to the impacts of climate change, given that any decline in ecosystem health (e.g. decreasing sediment supply) or changes to physical processes (e.g. sea level rise, increasing wave energy) could drive the sediment budgets of these systems into a net erosive state. Therefore, knowledge of both the sediment sources and transport mechanisms is required to predict the sensitivity of reef-associated landforms to future climate change. Here, we examine the benthic habitat composition, sediment characteristics (composition, texture, and age), and transport mechanisms and pathways to understand the interconnections between coastal morphology and the reef system at Tantabiddi, Ningaloo Reef, Western Australia. Benthic surveys and sediment composition analysis revealed that although live coral accounts for less than 5% of the benthic cover, coral is the dominant sediment constituent (34% on average). Sediment ages (²³⁸U/²³⁰Th) were mostly found to be thousands of years old, suggesting that the primary sediment source is relic reef material (e.g. Holocene reef framework). Sediment transport across the lagoon was quantified through measurements of ripple migration rates, which were found to be shoreward migrating and responsible for feeding the large shoreline salient in the lee of the reef. The derived sediment fluxes were comparable with previously measured rates of sediment production by bioerosion. These results suggest that sediment budgets of systems dependent on old (>10³ years) source materials may be more resilient to climate change as present-day reef health and community composition (i.e. sources of ‘new’ carbonate production) have limited influence on sediment supply. Therefore, the vulnerability of reef-associated landforms in these systems will be dictated by future changes to mechanisms of sediment generation (e.g. bioerosion) and/or physical processes. © 2018 John Wiley & Sons, Ltd.