Plant responses to global change: next generation biogeography

Global change has become a major ecological concern that has the potential to dramatically alter plant distributions and assemblages worldwide. The specific response of plants to global change will depend on their ability to move, evolve, or adjust through phenotypic plasticity. Advances in biogeographic research are on the verge of a giant leap forward if we can take advantage of emerging tools in genetics and genomics. In this review, we appraise how new, post-Sanger, high-throughput sequencing and associated technologies can be used by next generation biogeographers to assess plant responses to global change. First, we briefly review the recent advances in genome sequencing and available approaches of genomic analysis. Secondly, we discuss the three main plant responses to global change: migration, adaptation, and phenotypic plasticity. This review is intended to spark the interest of biogeographers who do not traditionally use genetics but could benefit from including genetic and genomic tools into their research. Our goal is to illustrate that their use can contribute to new perspective and add an additional level of resolution into future biogeographic research.     

The remarkable rapid X-ray, ultraviolet, optical and infrared variability in the black hole XTE J1118+480

The transient black-hole binary XTE J1118+480 exhibited dramatic rapid variability at all wavelengths which were suitably observed during its 2000 April–July outburst. We examine time-resolved X-ray, ultraviolet, optical and infrared data spanning the plateau phase of the outburst. We find that both X-ray and infrared bands show large amplitude variability. The ultraviolet and optical variability is more subdued, but clearly correlated with that seen in the X-rays. The ultraviolet, at least, appears to be dominated by the continuum, although the lines are also variable. Using the X-ray variations as a reference point, we find that the ultraviolet (UV) variability at long wavelengths occurs later than that at short wavelengths. Uncertainty in the Hubble Space Telescope timing prohibits a determination of the absolute lag with respect to the X-rays, however. The transfer function is clearly not a delta-function, exhibiting significant repeatable structure. For the main signal we can rule out an origin in reprocessing on the companion star – the lack of variation in the lags is not consistent with this, given a relatively high orbital inclination. Weak reprocessing from the disc and/or companion star may be present, but is not required, and another component must dominate the variability. This could be variable synchrotron emission correlated with X-ray variability, consistent with our earlier interpretation of the infrared (IR) flux as due to synchrotron emission rather than thermal disc emission. In fact, the broad-band energy distribution of the variability from IR to X-rays is consistent with expectations of optically thin synchrotron emission. We also follow the evolution of the low-frequency quasi-periodic oscillation in X-rays, UV, and optical. Its properties at all wavelengths are similar, indicating a common origin.     

Geochemistry of tertiary alkaline rocks of the Eastern Trans-Pecos Magmatic Province,Texas

The Trans-Pecos Magmatic Province (TPMP) is an alkalic field that was active between 48-17 Ma. Rocks of two subprovinces in the eastern alkalic belt of the TPMP, the Big Bend region and the Davis Mountains, have been analyzed for major and trace element concentrations in order to determine what magmatic processes operated to influence the compositional evolution of the magmas, and to explore what relationship existed between the silica-oversaturated evolved rocks and the silica-undersaturated mafic rocks. Similar compositional trends exist in both subprovinces, implying that the evolved rocks are genetically related to the mafic rocks, and that the differentiation processes were broadly reproducible spatially and temporally.Four stages of evolution have been identified: Stage I, alkali basalt to trachyte; stage II, trachyte to quartz trachyte; stage III, quartz trachyte to rhyolite/comendite; and stage IV, rhyolite/comendite to high-silica rhyolite/comendite. These stages were identified by discontinuities in trends on variation diagrams; within stages I and II, more than one subtrend exist.Stage I can best be modeled as the result of simple crystal fractionation with minor magma replenishment. Two subtrends within this stage indicate that variations in the processes or their rates may have occurred. Stage II exhibits both closed- and open-system behavior. The open system behavior consists of combined fractionation-assimilation and episodic mixing of stage II and stage I magmas. Stages III and IV evolved under open system processes of combined fractionation-assimilation, with the assimilant having compositional characteristics of a shale-dominated sedimentary assemblage.The four stages and subtrends within the stages occur in both subprovinces. Further, some subtrends comprise rocks that differ in age by as much as 10 m.y. In each subprovince, the stratigraphy indicates a random interlaying of rocks of the different stages, generally erupted from more than one center. That contemporaneous magmas of different stages existed in a given subprovince is indicated by the interfingering of their erupted products. These constraints argue against a single magma production-evolution scheme. Rather, the data suggest that magmas of the different stages were produced more than once during the evolution of the eastern TPMP, and that during any given time, production and evolution of magma of all stages were occurring.     

FLUORINE ABUNDANCES OF TWENTY NINE GEOLOGICAL AND OTHER REFERENCE SAMPLES USING FAST-NEUTRON ACTIVATION ANALYSIS

The fluorine content in twenty-nine reference samples of geological interest has been determined using a well tried and tested method which has been previously reported. The analytical method uses fast neutron activation involving the reaction ¹⁹F(n,a)¹⁶N and gamma spectrometry. Interferences have been found to be negligible for the experimental conditions used. The method involves minimal sample preparation, is rapid and can easily measure concentrations down to 5 parts per million in a 5 g sample.     

The relative impacts of spills of two alternative fuels on the microalgae of a sandy site: a microcosm study

Electric power generation in the United States uses substantial amounts of fuel oil #6. Orimulsion, an emulsion of bitumen, water, and a surfactant, is an alternative. A portion of the information that managers need to compare the two fuels is their relative environmental impacts. Both fuels are shipped by sea, so the impact of spills on the marine benthos is a concern. We used microcosms to assess the relative impacts of simulated spills of these fuels on the microalgae of shallow subtidal sandy bottoms. Response variables included microalgal abundance, primary productivity, ratio of chlorophyll a to phaeophytin, and ratio of primary production to chlorophyll a. During our 88-day experiment, we found no significant differences between the fuels for any variable. We suggest that weathering before the spill reaches the shore removes the most toxic components, rendering the fuels essentially equal in their impact on benthic microalgae.     

A Test and Re-Estimation of Taylor’s Empirical Capacity–Reserve Relationship

In 1977, Taylor proposed a constant elasticity model relating capacity choice in mines to reserves. A test of this model using a very large (n = 1,195) dataset confirms its validity but obtains significantly different estimated values for the model coefficients. Capacity is somewhat inelastic with respect to reserves, with an elasticity of 0.65 estimated for open-pit plus block-cave underground mines and 0.56 for all other underground mines. These new estimates should be useful for capacity determinations as scoping studies and as a starting point for feasibility studies. The results are robust over a wide range of deposit types, deposit sizes, and time, consistent with physical constraints on mine capacity that are largely independent of technology.