Use of particulate surrogates for assessing microbial mobility in subsurface ecosystems

Mass fluxes from the ground surface can play a vital role in influencing groundwater ecosystems. Rates of delivery may influence intact ecosystem composition, while fluxes of substances associated with anthropogenic activity may critically alter the functioning of associated microbial assemblages. Field-based tracing experiments offer a valuable means of understanding mass transport rates and mechanisms, particularly in complex heterogeneous epikarst systems overlying vulnerable fissured aquifers. A short-term tracer experiment monitoring solute and particle tracer concentrations after they passed through a 10-m-thick sequence of limestone, capped by a thin soil, revealed rapid travel times and variable attenuation rates for the substances employed. Results demonstrated that particle tracers have shorter average travel times and can reach the subsurface in higher concentrations and over shorter times than non-reactive solutes. High recovery rates for the bacterial tracer Ralstonia eutropha H16 contrasted strongly with those of similarly sized fluorescent polystyrene microspheres, highlighting the importance of physico-chemical surface characteristics of particle tracers. Complementary laboratory batch experiments examined the role played by organic and inorganic soil/rock surfaces on particle tracer attenuation. Findings suggest that biofilms may significantly promote transport of particulate material below ground, i.e., the delivery of allochthonous microorganisms to karst groundwater.     

Efficient Representation of Laguerre Mosaics with an Application to Microstructure Simulation of Complex Ore

Mathematical Geosciences - Laguerre mosaics have been an important modeling approach in astronomy, physics, crystallography, geology and mathematics for several decades. In materials science, they...     

Self-diffusion of water and its dependence on temperature and ionic strength in highly compacted montmorillonite, illite and kaolinite

The effect of temperature and ionic strength on the diffusion of HTO parallel to the direction of compaction through 5 highly compacted clay minerals (bulk dry density, ρ_b,d = 1.90 ± 0.05 Mg/m³), namely montmorillonite (Na- and Ca-form), illite (Na- and Ca-form), and kaolinite, was studied. The diffusion experiments were carried out at temperatures between 0 °C and 60 °C and at ionic strengths of 0.01 M and 1 M NaCl for the Na-form clays and kaolinite, and of 0.005 M and 0.5 M CaCl₂ for the Ca-form. The ionic strength had an insignificant influence on the values of the effective diffusion coefficient (variation by less than 10%) for the clays under study at this degree of compaction. The effective diffusion coefficients followed the order Na-montmorillonite < Ca-montmorillonite < Ca-illite < Na-illite  kaolinite. It is thought that the differences between Na- and Ca-montmorillonite originate from the larger size particles, and thus the lower tortuosity of the latter; whereas the differences between Na- and Ca-illite are related to the different degree of solvation of the Na and Ca cations. The activation energies were successfully calculated using the Arrhenius law. Swelling clays (Na- and Ca-montmorillonite) had slightly larger activation energy values (20 kJ/mol) compared to bulk water (17 kJ/mol); Ca-illite (16 kJ/mol), Na-illite (13 kJ/mol) and kaolinite (14.4 kJ/mol) lower values than that of bulk water. The low activation energies of the last three clays may be related to weaker H-bonds between water and the clay surfaces compared to those in bulk water.     

The Erbisberg drilling 2011: Implications for the structure and postimpact evolution of the inner ring of the Ries impact crater

The 26 km diameter Nördlinger Ries is a complex impact structure with a ring structure that resembles a peak ring. A first research drilling through this “inner crystalline ring” of the Ries was performed at the Erbisberg hill (SW Ries) to better understand the internal structure and lithology of this feature, and possibly reveal impact‐induced hydrothermal alteration. The drill core intersected the slope of a 22 m thick postimpact travertine mound, before entering 42 m of blocks and breccias of crystalline rocks excavated from the Variscan basement at >500 m depth. Weakly shocked gneiss blocks that show that shock pressure did not exceed 5 GPa occur above polymict lithic breccias of shock stage Ia (10–20 GPa), with planar fractures and planar deformation features (PDFs) in quartz. Only a narrow zone at 49.20–50.00 m core depth exhibits strong mosaicism in feldspar and {102} PDFs in quartz, which are indicative of shock stage Ib (20–35 GPa). Finally, 2 m of brecciated Keuper sediments at the base of the section point to an inverse layering of strata. While reverse grading of clast sizes in lithic breccias and gneiss blocks is consistent with lateral transport, the absence of diaplectic glass and melt products argues against dynamic overthrusting of material from a collapsing central peak, as seen in the much larger Chicxulub structure. Indeed, weakly shocked gneiss blocks are rather of local provenance (i.e., the transient crater wall), whereas moderately shocked polymict lithic breccias with geochemical composition and ⁸⁷Sr/⁸⁶Sr signature similar to Ries suevite were derived from a position closer to the impact center. Thus, the inner ring of the Ries is formed by moderately shocked polymict lithic breccias likely injected into the transient crater wall during the excavation stage and weakly shocked gneiss blocks of the collapsing transient crater wall that were emplaced during the modification stage. While the presence of an overturned flap is not evident from the Erbisberg drilling, a survey of all drillings at or near the inner ring point to inverted strata throughout its outer limb. Whether the central ring of the Ries represents remains of a collapsed central peak remains to be shown. Postimpact hydrothermal alteration along the Erbisberg section comprises chloritization, sulfide veinlets, and strong carbonatization. In addition, a narrow zone in the lower parts of the polymict lithic breccia sequence shows a positive Eu anomaly in its carbonate phase. The surface expression of this hydrothermal activity, i.e., the travertine mound, comprises subaerial as well as subaquatic growth phases. Intercalated lake sediments equivalent to the early parts of the evolution of the central crater basin succession confirm a persistent impact‐generated hydrothermal activity, although for less time than previously suggested.     

Multi-year observations of the high mountain water cycle in the Langtang catchment,Central Himalaya

The Langtang catchment is a high mountain, third order catchment in the Gandaki basin in the Central Himalaya (28.2°N, 85.5°E), that eventually drains into the Ganges. The catchment spans an elevation range from 1400 to 7234 m a.s.l. and approximately one quarter of the area is glacierized. Numerous research projects have been conducted in the valley during the last four decades, with a strong focus on the cryospheric components of the catchment water balance. Since 2012 multiple weather stations and discharge stations provide measurements of atmospheric and hydrologic variables. Full weather stations are used to monitor at an hourly resolution all four radiation components (incoming and outgoing shortwave and longwave radiation; SW_in/out and LW_in/out), air temperature, humidity, wind speed and direction, and precipitation, and cover an elevational range of 3862–5330 m a.s.l. Air temperature and precipitation are monitored along elevation gradients for investigations of the spatial variability of the high mountain meteorology. Dedicated point-scale observations of snow cover, depth and water equivalent as well as ice loss have been carried out over multiple years and complement the observations of the water cycle. All data presented is openly available in a database and will be updated annually.     

The role of local government in promoting sustainable urban agriculture in Dar es Salaam and Copenhagen

As a multifunctional activity and land use, urban agriculture supports a range of objectives, from urban greening to food security. However, it is often left out of urban policy. As a result of the highly contextual and cross-cutting nature of urban agriculture, there are relatively few comprehensive and formalized regulatory tools to draw from. Different cities around the world are now deciding how to fit urban agriculture into the urban agenda; however, in many places urban agriculture continues to operate in the absence of legitimization due to its relatively mobile and dynamic nature. This article looks at the importance of local and central governments in promoting sustainable urban agriculture. Through participatory action research, it examines the cases of Dar es Salaam, Tanzania and Copenhagen, Denmark to understand stakeholder interactions, as well as present and future barriers to the conservation of existing urban agriculture and future initiatives. The findings suggest that municipal recognition and institutional support for urban agriculture is an important component in increasing the sustainability of related initiatives. Local and central government plays a role in the legitimization and institutionalization of urban agriculture through the facilitation of multi-stakeholder processes, policy development and the conservation and allocation of land.     

On the Formation of an Elevated Nocturnal Inversion Layer in the Presence of a Low-Level Jet: A Case Study

We report on observed nocturnal profiles, in which an inversion layer is located at the core of a low-level jet, bounded between two well-mixed layers. High-resolution vertical profiles were collected during a field campaign in a small plain in the Israeli desert (Negev), distant 100 km from the eastern shore of the Mediterranean Sea. During the evening hours, the synoptic flow, superposed on the late sea breeze, forms a low-level jet characterized by a maximum wind speed of 12 m s ⁻¹ at an altitude of 150 m above the ground. The strong wind shear at the jet maximum generates downward heat fluxes that act against the nocturnal ground cooling. As a result, the typical ground-based nocturnal inversion is “elevated” towards the jet centre, hence a typical early morning thermal profile is observed a few hours after sunset. Since the jet is advected into the region, its formation does not depend on the presence of a surface nocturnal inversion layer to decouple the jet from surface friction. On the contrary, here the advected low-level jet acts to hinder the formation of such an inversion. These unusual temperature and wind profiles are expected to affect near-ground dispersion processes.     

Empirical-statistical downscaling and error correction of regional climate models and its impact on the climate change signal

Realizing the error characteristics of regional climate models (RCMs) and the consequent limitations in their direct utilization in climate change impact research, this study analyzes a quantile-based empirical-statistical error correction method (quantile mapping, QM) for RCMs in the context of climate change. In particular the success of QM in mitigating systematic RCM errors, its ability to generate “new extremes” (values outside the calibration range), and its impact on the climate change signal (CCS) are investigated. In a cross-validation framework based on a RCM control simulation over Europe, QM reduces the bias of daily mean, minimum, and maximum temperature, precipitation amount, and derived indices of extremes by about one order of magnitude and strongly improves the shapes of the related frequency distributions. In addition, a simple extrapolation of the error correction function enables QM to reproduce “new extremes” without deterioration and mostly with improvement of the original RCM quality. QM only moderately modifies the CCS of the corrected parameters. The changes are related to trends in the scenarios and magnitude-dependent error characteristics. Additionally, QM has a large impact on CCSs of non-linearly derived indices of extremes, such as threshold indices.     

A stabilized assumed deformation gradient finite element formulation for strongly coupled poromechanical simulations at finite strain

An adaptively stabilized finite element scheme is proposed for a strongly coupled hydro‐mechanical problem in fluid‐infiltrating porous solids at finite strain. We first present the derivation of the poromechanics model via mixture theory in large deformation. By exploiting assumed deformation gradient techniques, we develop a numerical procedure capable of simultaneously curing the multiple‐locking phenomena related to shear failure, incompressibility imposed by pore fluid, and/or incompressible solid skeleton and produce solutions that satisfy the inf‐sup condition. The template‐based generic programming and automatic differentiation (AD) techniques used to implement the stabilized model are also highlighted. Finally, numerical examples are given to show the versatility and efficiency of this model. Copyright © 2013 John Wiley & Sons, Ltd.     

Percolation and Particle Transport in the Unsaturated Zone of a Karst Aquifer

Recharge and contamination of karst aquifers often occur via the unsaturated zone, but the functioning of this zone has not yet been fully understood. Therefore, irrigation and tracer experiments, along with monitoring of rainfall events, were used to examine water percolation and the transport of solutes, particles, and fecal bacteria between the land surface and a water outlet into a shallow cave. Monitored parameters included discharge, electrical conductivity, temperature, organic carbon, turbidity, particle-size distribution (PSD), fecal indicator bacteria, chloride, bromide, and uranine. Percolation following rainfall or irrigation can be subdivided into a lag phase (no response at the outlet), a piston-flow phase (release of epikarst storage water by pressure transfer), and a mixed-flow phase (increasing contribution of freshly infiltrated water), starting between 20 min and a few hours after the start of recharge event. Concerning particle and bacteria transport, results demonstrate that (1) a first turbidity signal occurs during increasing discharge due to remobilization of particles from fractures (pulse-through turbidity); (2) a second turbidity signal is caused by direct particle transfer from the soil (flow-through turbidity), often accompanied by high levels of fecal indicator bacteria, up to 17,000 Escherichia coli /100 mL; and (3) PSD allows differentiation between the two types of turbidity. A relative increase of fine particles (0.9 to 1.5 μm) coincides with microbial contamination. These findings help quantify water storage and percolation in the epikarst and better understand contaminant transport and attenuation. The use of PSD as "early-warning parameter" for microbial contamination in karst water is confirmed.