Effect of solar radiation and the subsequent dark periods on two newly isolated and characterized Antarctic marine bacteria

Two strains of psychrotolerant Antarctic marine bacteria were isolated and characterized using biochemical and molecular techniques. Sequencing of 16S rRNA gene showed that UVvi strain belongs to the genus Arthrobacter whereas UVps strain is related to the Flexibacter-Cytophaga-Bacteroides (FCB) group. Response of the strains to solar radiation was studied during the summer of 1999 in Potter Cove, near Jubany station (South Shetland Island, Antarctica). The effect of photosynthetically available radiation (PAR, 400-700 nm), ultraviolet-A (UV-A, 320-400 nm) and ultraviolet-B radiation (UV-B, 280-320 nm) on cell viability was studied using mixed cultures in quartz bottles covered with interferential filters and exposed to solar radiation. In all experiments, four treatments were used: dark (with light screened out), PAR (with UV radiation screened out), PAR+UV-A (UV-B screened out) and PAR+UV-A+UV-B. Under the assayed conditions, PAR+UV-A and PAR+UV-A+UV-B radiation showed similar negative effects on the viability of the studied strains. However, at the end of the exposure time, mortality values in PAR+UV-A+UV-B treatments were higher than those observed under PAR+UV-A treatments. In both PAR+UV-A and PAR+UV-A+UV-B treatments we observed high levels of hydrogen peroxide compared with the dark control. The Arthrobacter UVvi strain showed significant recovery in dark conditions after exposure to the PAR+UV-A but not after the PAR+UV-A+UV-B treatment. This strain proved to be more resistant to UV radiation than the FCB group-related UVps strain. The results showed that UV radiation has a deleterious effect on these Antarctic marine bacteria and also revealed that the analysed components of the Antarctic bacterioplankton may have different responses when they are exposed to the same irradiance conditions.     

An application of Ensemble Kalman Filter in integral-balance subsurface modeling

Data assimilation method provides a framework to decrease the uncertainty of hydrological modeling by sequentially incorporating observations into numerical model. Such a process involves estimating statistical moments of different order based on the evolution of conditional probability distribution function. Because of the nonlinearity of many hydrological dynamics, explicit and analytical solutions for moments of state distribution are often impossible. Evensen [J Geophys Res 99(c5): 10143–10162 (1994)] introduced Ensemble Kalman Filtering (EnKF) method to address such problems. We test and evaluate the performance of EnKF in fusing model predictions and observations for a saturated–unsaturated integral-balance subsurface model. We find EnKF improve the model predictions, and also we conclude a good estimate of state variance is essential for the success of EnKF.     

Explosion of comet Shoemaker-Levy 9 on entry into the Jovian atmosphere

We use the astrophysical hydrocode ZEUS to compute high-resolution models of the disruption and deceleration of cometary fragments striking Jupiter. We find that simple analytic and semianalytic models work well for kilometer-size impactors. We show that previous numerical models that placed the explosion much deeper in the atmosphere failed to fully resolve important gasdynamical instabilities. These instabilities tear the comet apart, greatly increase its effective cross section, and bring it to an abrupt halt. A 1 km diameter fragment loses over 90% of its kinetic energy within a single scale height at an atmospheric pressure of order 10 bars. For all practical purposes, it explodes.     

Effect of isolation temperature on the characteristics of extracellular proteases produced by Antarctic bacteria

Protease-producing psychrotolerant bacteria were isolated from Antarctic biotopes on casein agar plates using different incubation temperatures. Most of the isolates were non-spore-forming Gram-negative motile rods with catalase activity, 30% were pigmented and none of them were glucose fermenters. All the strains were grown in liquid cultures at 20°C and protease secretion was tested using the azocasein method. Despite their capacity for production of a clear zone of hydrolysis in agar plates, some strains did not produce detectable levels of proteolytic activity in liquid cultures. The lowest apparent optimum temperature for protease activity found in culture supernatants was 40°C. Almost all the strains showed activation energy values about 10-20 kJ-mol⁻¹ lower than that observed for a mesophilic Subtilisin. Most of the proteases showed optimal activity at neutral or alkaline pH values and developed a multiple-band profile on gelatine-SDS-PAGE. It was observed that the lower the strain isolation temperature was, the more stongly cold-adapted–in terms of optimal temperature and activation energy–were the proteases produced by them. This dependence of the characteristics of the proteases on the isolation temperature is an important factor to take into account in the design of screening programmes directed towards the isolation of psychrotolerant bacteria able to produce proteases strongly or weakly adapted to work in the cold. The Antarctic area explored proved to be a promising source of proteolytic bacteria with potential use in industrial processes to be carried out at low or moderate temperatures.     

Clean and safe supply of fish and shellfish to clear the HACCP regulation by use of clean and cold deep ocean water in Rausu, Hokkaido, Japan

For the supply of fish and shellfish to consumers in fresh condition, clean handling after catch from the sea is essential. According to HACCP （Hazard Analysis and Critical Control Points）, it is important to meet such requirement by keeping fish and shellfish under a certain low temperature and clean conditions after catching. The deep ocean water （DOW） characterized by low temperature and cleanliness has been chosen for fish and shellfish handlings, particularly for salmon, cod, and sea urchin in Town ＇Rausu＇ in Hokkaido, Japan. DOW below 2.9℃ of an amount of nearly 5 000 m^3 is planned to be pumped up every day from a depth of about 350 m, and temporarily stored in a large simulated tank on land. DOW is then supplied to fish boats through hydrants distributed throughout the harbor and used for keeping salmon in clean and cold conditions. Ice made from DOW is also used for lowering temperature if necessary. DOW and ice made from DOW are also used during the transportation of fish and shellfish. The entire system is scheduled to be completed by the summer of 2005.     

Impact of small-scale structures on estuarine circulation

We present a novel and challenging application of a 3D estuary-shelf model to the study of the collective impact of many small-scale structures (bridge pilings of 1 m × 2 m in size) on larger-scale circulation in a tributary (James River) of Chesapeake Bay. We first demonstrate that the model is capable of effectively transitioning grid resolution from ~?400 m down to ~?1 m near the pilings without introducing undue numerical artifact. We then show that despite their small sizes and collectively small area as compared to the total channel cross-sectional area, the pilings exert a noticeable impact on the large-scale circulation, and also create a rich structure of vortices and wakes around the pilings. As a result, the water quality and local sedimentation patterns near the bridge piling area are likely to be affected as well. However, when evaluating over the entire waterbody of the project area, the near field effects are weighed with the areal percentage which is small compared to that for the larger unaffected area, and therefore the impact on the lower James River as a whole becomes relatively insignificant. The study highlights the importance of the use of high resolution in assessing the near-field impact of structures.     

Sulphur partitioning in sediments and biodeposits below mussel rafts in the Ria de Arousa (Galicia, NW Spain)

Forty four core samples were analyzed to determine sediment particle size, total organic carbon (TOC), total inorganic carbon (TIC), total nitrogen and total sulphur. Sequential extraction of S was also carried out, differentiating AVS (acid volatile sulphide), elemental S, organic S and pyrite S. The results obtained show that the presence of mussel rafts causes intense changes in the physicochemical composition and properties of the sea floor in the Ria de Arousa. The percentage of silt and clay, TOC, TIC and total N were significantly higher in the biodeposit than in the sediment. In contrast, there were no differences between the biodeposit and the sediment in terms of pH (8.0-8.7) and redox potential. The sediment and biodeposit were always anoxic, with values of redox potentials below -100 mV. In accordance with these conditions, the dominant fraction of S was pyrite S (FeS(2)). The AVS fraction and elemental S were present at low concentrations, except in the uppermost part of each core. Pyrite was relatively stable when the biodeposit and sediment were maintained in suspension for 8 days in oxic sea water; unlike the AVS fraction, which disappeared within a few hours.