Using legacy data to reconstruct the past? Rescue,rigour and reuse in peatland geochronology

There is a growing interest in the rescue and reuse of data from past studies (so-called legacy data). Data loss is alarming, especially where natural archives are under threat, such as peat deposits. Here we develop a workflow for reuse of legacy radiocarbon dates in peatland studies, including a rigorous quality assessment that can be tailored to specific research questions and study regions. A penalty is assigned to each date based on criteria that consider taphonomic quality (i.e., sample provenance) and dating quality (i.e., sample material and method used). The weights of quality criteria may be adjusted based on the research focus, and resulting confidence levels may be used in further analyses to ensure robustness of conclusions. We apply the proposed approach to a case study of a (former) peat landscape in the Netherlands, aiming to reconstruct the timing of peat initiation spatially. Our search yielded 313 radiocarbon dates from the 1950s to 2019. Based on the quality assessment, the dates—of highly diverse quality—were assigned to four confidence levels. Results indicate that peat initiation for the study area first peaked in the Late Glacial (~14,000 cal years BP), dropped during the Boreal (~9,500 cal years BP) and showed a second peak in the Subboreal (~4,500 cal years BP). We tentatively conclude that the earliest peak was mostly driven by climate (Bølling–Allerød interstadial), whereas the second was probably the result of Holocene sea level rise and related groundwater level rise in combination with climatic conditions (hypsithermal). Our study highlights the potential of legacy data for palaeogeographic reconstructions, as it is cost-efficient and provides access to information no longer available in the field. However, data retrieval may be challenging, and reuse of data requires that basic information on location, elevation, stratigraphy, sample and laboratory analysis are documented irrespective of the original research aims.     

Organic biomarkers in the twilight zone—Time series and settling velocity sediment traps during MedFlux

The transfer of material through the twilight zone of the ocean is controlled by sinking particles that contain organic matter (OM) and mineral ballast. During the MedFlux field program in the northwestern Mediterranean Sea in 2003, sinking particulate matter was collected in time series (TS) and settling velocity (SV) traps and analyzed for amino acids, lipids, and pigments (along with ballast minerals) [Lee, C., Armstrong, R.A., Wakeham, S.G., Peterson, M.L., Miquel, J.C., Cochran, J.K., Fowler, S.W., Hirschberg, D., Beck, A. Xue, J., 2009b. Particulate matter fluxes in time series and settling velocity sediment traps in the northwestern Mediterranean Sea. Deep-Sea Research II, this volume [doi:10.1016/j.dsr2.2008.12.003]]. The goal was to identify how organic chemical compositions of sinking particles varied as a function of their in-situ settling velocity. The TS record was used to define the biogeochemical character and temporal pattern in flux during the period of SV trap deployment. Temporal variations in organic and mineral compositions are consistent with particle biogeochemistry being driven by the seasonal succession of phytoplankton. Spring diatom bloom conditions led to a high flux of rapidly sinking aggregates and zooplankton fecal matter; summer oligotrophy followed and was characterized by a higher proportion of slowly sinking phytoplankton cells. Bacterial degradation is particularly important during the low-flux summer period. Settling velocity traps show that a large proportion of particulate organic matter sinks at 200–500 m d⁻¹. Organic compositions of this fast-sinking material mirrors that of fecal pellets and aggregated material that sinks as the spring bloom terminates. More-slowly sinking OM bears a stronger signature of bacterial degradation than do the faster-sinking particles. The observation that compositions of SV-sorted fractions are different implies that the particle field is compositionally heterogeneous over a range of settling velocities. Thus physical and biological exchange between fast-sinking and slow-sinking particles as they pass down the water column must be incomplete.     

The role of organic matter in the sorption capacity of marine sediments

Past studies have suggested that desiccation enhances hydrophobicity of salt marsh sediment, and that drying and rewetting sediment can be used to investigate sorption mechanisms of amino acids and other organic compounds [Liu, Z., Lee, C., 2006. Drying effects on sorption capacity of coastal sediment: The importance of architecture and polarity of organic matter. Geochim. Cosmochim. Acta 70, 3313–3324]. Here we further develop this technique to study sorption of hydrophobic and hydrophilic organic compounds in a wide range of marine sediments. Our results show that hydrophilic compounds sorb strongly to wet coastal sediments; in dried sediments, sorption of hydrophilic compounds decreases, while sorption of hydrophobic compounds is greatly enhanced. Small compounds with aromatic rings sorb more in dried than wet coastal sediments, suggesting that aromatic groups have a stronger effect on sorption than polar groups like amino and carboxyl moieties. Sorption of lysine, glutamic acid and putrescine decreases greatly when sediment is pretreated with KCl, indicating the importance of cation ion exchange. However, α-amino acids sorb much more than corresponding β- or γ-amino acids, and l-alanine sorbs more than d-alanine, suggesting that amino group location and chiral selectivity play an important role in sorption. Comparison of lysine and tyrosine sorption in different sediments indicates that source and diagenetic state of organic matter are important factors determining sorption capacity. Lysine sorbs much more to organic detritus from salt marsh sediment than to fresh Spartina root materials, marine particles, lignin or humic acids, indicating the importance of structural integrity in sorption. Desorption hysteresis of glutamic acid, putrescine and lysine (in dried sediment) suggests the presence of enzyme-type sorption sites of high sorption energy or multiple binding mechanisms. Taken together, these findings suggest that organic matter plays the major role in amino acid sorption in organic-rich sediments.     

The Effect of Heavy Tamping on Structured Residual Clay Site

This paper examines the effect of heavy tamping (dynamic compaction) on highly porous structured residual clayey soil. The aim of this study is to analyse the feasibility of this technique when applied on lightly bonded residual soil sites, which are commonly found in tropical and subtropical regions. This soil has some interesting characteristics, such as high fine grain soil percentages (56% clay and 22% silt), a plastic index of 11%, high porosity (initial void ratio of 1.21), high hydraulic conductivity (about 10^?5 m/s) and a high stiffness at small strains (E?=?49.2-MPa). The research involves field [Cone Penetration Test (CPT) and the dynamic compaction] and laboratory (triaxial tests, characterization and hydraulic conductivity) investigation. According to laboratory tests, the void ratio decreased to 0.96, hydraulic conductivity decreased to 2.8?×?10^?7 m/s, the effective peak friction angle (?′) increased from 30.5° (in natural conditions) to about 35.5°, and the triaxial stiffness at small strains decreased to E?=?20-MPa due to dynamic compaction. CPT results have shown an improved depth in which CPT tip strength (q_t) increased from nearly 650-kPa to an average of 1700-kPa and CPT sleeve friction (f_s) increased from approximately 50-kPa to about 130-kPa. Horizontal displacements were observed up to about 4.0 m of depth (approximately the same depth at which CPT results showed soil improvement). It was concluded that heavy tamping reduces soil voids and substantially increases soil strength, but also breaks soil structure and decreases soil stiffness. It is thus not a suitable ground improvement solution for highly porous structured residual clayey soil.

     

Geochemistry of sterols in sediments from Black Sea and the southwest African shelf and slope

Surface sediment samples from the shelf and continental slope off southwest Africa and sediment cores from the deepest part of the Black Sea were analyzed for sterols. Because the organic matter in these anoxic sediments is relatively well-preserved, the input from source organisms in the water column is important in controlling sterol distribution patterns. The sterol distribution on the Namibian shelf is complex, probably because of the great spatial and temporal variability of biological productivity caused by seasonal upwelling and changes in oxygen concentration. The Black Sea, perhaps because of greater physical stability of the water column, has sterol distributions which can be explained by microbial activity or chemical processes acting on a constant input of organic carbon from surface production.     

Effects of hydrostatic pressure on microbial alteration of sinking fecal pellets

We used a new experimental device called PASS (PArticle Sinking Simulator) during MedFlux to simulate changes in in situ hydrostatic pressure that particles experience sinking from mesopelagic to bathypelagic depths. Particles, largely fecal pellets, were collected at 200 m using a settling velocity NetTrap (SV NetTrap) in Ligurian Sea in April 2006 and incubated in high-pressure bottles (HPBs) of the PASS system under both atmospheric and continuously increasing pressure conditions, simulating the pressure change experienced at a sinking rate of 200 m d⁻¹. Chemical changes over time were evaluated by measuring particulate organic carbon (POC), carbohydrates, transparent exopolymer particles (TEP), amino acids, lipids, and chloropigments, as well as dissolved organic carbon (DOC) and dissolved carbohydrates. Microbial changes were evaluated microscopically, using diamidinophenylindole (DAPI) stain for total cell counts and catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) for phylogenetic distinctions. Concentrations (normalized to POC) of particulate chloropigments, carbohydrates and TEP decreased under both sets of incubation conditions, although less under the increasing pressure regime than under atmospheric conditions. By contrast, dissolved carbohydrates (normalized to DOC) were higher after incubation and significantly higher under atmospheric conditions, suggesting they were produced at the expense of the particulate fraction. POC-normalized particulate wax/steryl esters increased only under pressure, suggesting biochemical responses of prokaryotes to the increasing pressure regime. The prokaryotic community initially consisted of 43% Bacteria, 12% Crenarchaea and 11% Euryarchaea. After incubation, Bacteria dominated (90%) the prokaryote community in all cases, with γ-Proteobacteria comprising the greatest fraction, followed by the Cytophaga–Flavobacter cluster and α-Proteobacteria group. Using the PASS system, we obtained chemical and microbial evidence that degradation by prokaryotes associated with fecal pellets sinking through mesopelagic waters is limited by the increasing pressure they experience.     

Soil moisture-temperature feedbacks at meso-scale during summer heat waves over Western Europe

This paper investigates the impact of soil moisture-temperature feedback during heatwaves occurring over France between 1989 and 2008. Two simulations of the weather research and forecasting regional model have been analysed, with two different land-surface models. One resolves the hydrology and is able to simulate summer dryness, while the other prescribes constant and high soil moisture and hence no soil moisture deficit. The sensitivity analysis conducted for all heatwave episodes highlights different soil moisture-temperature responses (1) over low-elevation plains, (2) over mountains and (3) over coastal regions. In the plains, soil moisture deficit induces less evapotranspiration and higher sensible heat flux. This has the effect of heating the planetary boundary layer and at the same time of creating a general condition of higher convective instability and a slight increase of shallow cloud cover. A positive feedback is created which increases the temperature anomaly during the heatwaves. In mountainous regions, enhanced heat fluxes over dry soil reinforce upslope winds producing strong vertical motion over the mountain slope, first triggered by thermal convection. This, jointly to the instability conditions, favors convection triggering and produces clouds and precipitation over the mountains, reducing the temperature anomaly. In coastal regions, dry soil enhances land/sea thermal contrast, strengthening sea-breeze circulation and moist cold marine air advection. This damps the magnitude of the heatwave temperature anomaly in coastal areas, expecially near the Mediterranean coast. Hence, along with heating in the plains, soil dryness can also have a significant cooling effect over mountains and coastal regions due to meso-scale circulations.     

Seasonal-Scale and Decadal-Scale Sediment-Vegetation Interactions on the Subaqueous Susquehanna River Delta,Upper Chesapeake Bay

Submersed aquatic vegetation (SAV) have been a prominent feature on the Susquehanna Flats, the shallow, subaqueous delta of the Susquehanna River, Maryland. SAV were absent from the Flats between 1972 and 2000, but have since recovered. While it is well established that SAV can improve water quality by promoting sediment and nutrient retention, it is not well understood how SAV on the Flats modulate sediment input from the Susquehanna River into the Upper Chesapeake Bay over different timescales. This study evaluates sedimentation on the Flats over seasonal to decadal timescales, using naturally occurring radioisotopes (⁷Be, ²¹⁰Pb) within the context of SAV biomass and Flats geomorphology. Results indicate that sedimentation on the Flats is both spatially and temporally variable. Although this variability cannot be explained by relationships with grain size and SAV biomass, river discharge, sediment supply, and geometry over the SAV bed likely control sedimentation in this system. Decadal-scale sedimentation is influenced by both flood events and changes in SAV biomass abundance. Average annual sediment accumulation was higher when SAV were present than when SAV were absent. SAV bed area was strongly correlated with average annual accumulation rate. These results suggest that a positive feedback between SAV abundance and accumulation rate exists; however, sediment supply and transport pathways are also important factors.