Spatial variability in growth and reproduction of the Pacific oyster Crassostrea gigas (Thunberg, 1793) along the west European coast

The Pacific oyster Crassostrea gigas was introduced in Europe for commercial purposes in the mid 1960s. It was initially thought that low winter temperatures would restrain this species' reproduction and settlement; however, its present distribution in areas where no introduction has taken place suggests that natural invasion and expansion has occurred. Along the European coast, wild populations of Pacific oysters are already found from northern Germany to southern Portugal. Whether C. gigas will continue to further expand through northern waters will depend on its physiological performance. In this study, the performance of wild oyster populations has been studied in terms of growth and reproduction at three stations: La Rochelle (France; 46°N), Yerseke (Oosterschelde estuary, The Netherlands, 51°N), and Texel (Wadden Sea estuary, The Netherlands, 53°N). The French population had the lowest somatic-shell mass ratio and an increase in maximum shell length, somatic and gonadal mass was observed from France to the Netherlands. In addition, mean oocyte diameter decreased significantly from south to north. The combination of increasing gonadal mass and decreasing oocyte volume suggests an increasing reproductive output in terms of egg numbers from France to The Netherlands. Differences in temperature between locations will at least be partly responsible for the observed patterns; however, other environmental factors (such as food availability, predation pressure, sediment type and/or seston concentration) cannot be excluded. Since smaller eggs (oocytes) are thought to have a longer development time, the environmental conditions along the Dutch coast may result in increased larval dispersal and possibly in further population expansion.     

Growth and reproduction of the bivalve Spisula subtruncata (da Costa) in Dutch coastal waters

The bivalve Spisula subtruncata is usually abundant in shallow coastal waters along the Dutch coast. However, its biomass has been decreasing since 1995. In order to assess whether reproductive failure may be the cause of the observed decline over the last decades, the energy investment in reproduction of a population of S. subtruncata from central Dutch coastal waters was studied. The population studied consisted of individuals of up to four years old. Shell length reached maximum values of around 32 mm and individual total body, somatic and gonadal ash-free dry mass reached maximum values of about 278 mg AFDM, 252 mg AFDM and 76 mg AFDM, respectively. A clear seasonal cycle in somatic and gonadal mass was observed. Somatic and gonadal mass indices increased in early spring and reached maximum values during summer, followed by a decrease to minimum values at the beginning of the following year. Spawning was in June–July and settlement of spat seems to have occurred in July–August. Mean oocyte diameter was 57.43 ± 0.03 μm, corresponding to a volume of 98972 μm³. These results suggested that reproductive failure was not the cause of the current population decline. Most likely, unsuccessful settlement of spat and/or severe predation during the first months of life were responsible for the observed patterns.     

Comparisons between the influences of habitat, body size and season on the dietary composition of the sparid Acanthopagrus latus in a large marine embayment

Seasonal samples from Shark Bay on the west coast of Australia were used to determine (1) the habitats occupied by the juveniles and adults of Acanthopagrus latus in this large subtropical marine embayment and (2) the extent to which the dietary composition of this sparid is influenced by habitat type, body length and season. Sampling was undertaken in two habitat types in which A. latus was known to be abundant, namely mangrove (Avicennia marina) creeks and nearby rocky areas, the latter comprising sandstone boulders and/or limestone reefs. The mean total length ±95% CLs of A. latus was far lower in mangrove creeks, 126 ± 6.1 mm, than in rocky areas, 313 ± 4.7 mm. As A. latus attains maturity at ca. 245 mm, the juveniles of this species typically occupy mangrove areas and then, with increasing body size, move to nearshore rocky areas, where they become adults. The species composition of the food ingested by juvenile A. latus in mangrove creeks differed markedly from that of large juveniles and adults in rocky areas. Based on analyses of data for both habitat types combined, this difference was far greater than that between size classes and season, which was negligible. There were indications, however, that, overall within each habitat, the dietary composition did change seasonally, although not with body size. Acanthopagrus latus fed predominantly on mangrove material, sesarmid crabs and small gastropods in mangrove habitats, and mainly on Brachidontes ustulatus in rocky areas, where this mytilid bivalve is very abundant. The mangrove material, which contributed nearly 40% of its overall dietary volume in mangrove creeks, consisted mainly of lateral root primordia. This apparently unique food source for a teleost is presumably ingested through subsurface nipping, which would be facilitated by the mouth and dentitional characteristics of sparids. The almost total lack of correspondence in the dietary compositions of fish in the length class that was well represented in both mangrove and rocky areas illustrates the extent to which this sparid is capable of opportunistic feeding behaviour.     

Comparison of high spatial resolution trace metal distributions with model simulations for surface waters of the Gulf of Cadiz

A multidisciplinary study in the Gulf of Cadiz is revisited, using additional diagnostic modelling tools. The dissolved trace metal (Cu, Ni, Zn, Co) distributions in the Gulf of Cadiz are analysed using modelled tracer evolutions, field observations and the concept of tracer ages. This study shows that a significant part of the observed metal distributions can be explained by the metal inputs of three river systems (Guadiana, Rio Tinto and Odiel, Guadalquivir) discharging into the Gulf of Cadiz, while the remainder of the signal is most likely associated with the benthic metal remobilisation along the shelf of this coastal region.     

Horizontal spatial and temporal distribution patterns of nearshore larval fish assemblages at a temperate rocky shore

There have been no previous studies of the composition of nearshore larval fish assemblages along the coast of Portugal. We aimed to describe the composition and horizontal distribution patterns of larval fish assemblages and their temporal dynamics near a rocky reef at depths shallower than 13 m (inshore) and at two miles (3.70 km) from shore (offshore), as well as along transects perpendicular to the shoreline, from the reef to 10 miles offshore (18.52 km). Samples were taken using 5 min sub-surface trawls at the rocky shore of the Arrábida Marine Park (W Portugal). A total of 1021 larvae were collected, belonging to 61 taxa inshore and to 29 taxa offshore. Along transects, 626 larvae of 52 taxa were collected. Most larvae belonged to coastal species associated with rocky reefs. Total larval abundance and diversity were higher from May to July, which is consistent with the spawning activity of adults. Diversity and total larval abundance decreased significantly with increasing distance from shore, both in the inshore/offshore comparison and in the transects, where this decrease was evident at a very small spatial scale (within the first mile from the reef). Species assemblages differed in the pattern of distribution, with most species clearly associated to the extreme nearshore. The distribution patterns obtained were independent of the spawning mode of species. Results are discussed in the light of the possible physical mechanisms that can potentially act at the Arrábida Marine Park to facilitate larvae retention and the role of larval behaviour.     

Population dynamics of Callichirus major (Say, 1818) (Crustacea, Thalassinidea) on a beach in northeastern Brazil

We describe the structure, reproductive cycle, fecundity, growth, and mortality of a harvested population of the ghost shrimp Callichirus major. Samples were collected at monthly intervals from September 1999 to October 2000 on an urban sandy beach (08°11′S 34°55′W) in northeastern Brazil. During this period the sex ratio did not differ significantly from 1:1 (0.98 M: 1 F). Minimum and maximum sizes of the Dorsal Oval were 2.59 and 12.19 mm for males and 4.46 and 12.62 mm for females, respectively. Ovigerous females were found throughout the period, except between August and September 2000. Maximum lifespan was estimated as 3.3 and 3.4 years for females and males, respectively. This northeastern population differed from others previously studied in southern and southeastern Brazil, in regard to sex ratio, maximum attained size, maturation size, period and duration of the reproductive cycle, and fecundity. We interpret these regional differences as evidence for over-fishing at the study site, and suggest that large-scale management plans for callianassid populations should use regional population parameters.     

The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilation systems: Part II - Performance and application to the California Current System

The Regional Ocean Modeling System (ROMS) 4-dimensional variational (4D-Var) data assimilation systems have been systematically applied to the mesoscale circulation environment of the California Current to demonstrate the performance and practical utility of the various components of ROMS 4D-Var. In particular, we present a comparison of three approaches to 4D-Var, namely: the primal formulation of the incremental strong constraint approach; the dual formulation “physical-space statistical analysis system”; and the dual formulation indirect representer approach. In agreement with theoretical considerations all three approaches converge to the same ocean circulation estimate when using the same observations and prior information. However, the rate of convergence of the dual formulation was found to be inferior to that of the primal formulation. Other aspects of the 4D-Var performance that relate to the use of multiple outer-loops, preconditioning, and the weak constraint are also explored. A systematic evaluation of the impact of the various components of the 4D-Var control vector (i.e. the initial conditions, surface forcing and open boundary conditions) is also presented. It is shown that correcting for uncertainties in the model initial conditions exerts the largest influence on the ability of the model to fit the available observations. Various important diagnostics of 4D-Var are also examined, including estimates of the posterior error, the information content of the observation array, and innovation-based consistency checks on the prior error assumptions. Using these diagnostic tools, we find that more than 90% of the observations assimilated into the model provide redundant information. This is a symptom of the large percentage of satellite data that are used and to some extent the nature of the data processing employed. This is the second in a series of three papers describing the ROMS 4D-Var systems.     

Numerical studies of methane production from Class 1 gas hydrate accumulations enhanced with carbon dioxide injection

Class 1 gas hydrate accumulations are characterized by a permeable hydrate-bearing interval overlying a permeable interval with mobile gas, sandwiched between two impermeable intervals. Depressurization-induced dissociation is currently the favored technology for producing gas from Class 1 gas hydrate accumulations. The depressurization production technology requires heat transfer from the surrounding environment to sustain dissociation as the temperature drops toward the hydrate equilibrium point and leaves the reservoir void of gas hydrate. Production of gas hydrate accumulations by exchanging carbon dioxide with methane in the clathrate structure has been demonstrated in laboratory experiments and proposed as a field-scale technology. The carbon dioxide exchange technology has the potential for yielding higher production rates and mechanically stabilizing the reservoir by maintaining hydrate saturations. We used numerical simulation to investigate the advantages and disadvantages of using carbon dioxide injection to enhance the production of methane from Class 1 gas hydrate accumulations. Numerical simulations in this study were primarily concerned with the mechanisms and approaches of carbon dioxide injection to investigate whether methane production could be enhanced through this approach. To avoid excessive simulation execution times, a five-spot well pattern with a 500-m well spacing was approximated using a two-dimensional domain having well boundaries on the vertical sides and impermeable boundaries on the horizontal sides. Impermeable over- and under burden were included to account for heat transfer into the production interval. Simulation results indicate that low injection pressures can be used to reduce secondary hydrate formation and that direct contact of injected carbon dioxide with the methane hydrate present in the formation is limited due to bypass through the higher permeability gas zone.     

Evolution of deep-water stratigraphic architecture, Magallanes Basin, Chile

The ˜4000 m thick and ∼20 Myr deep-water sedimentary fill of the Upper Cretaceous Magallanes Basin was deposited in three major phases, each with contrasting stratigraphic architecture: (1) the oldest deep-water formation (Punta Barrosa Formation) comprises tabular to slightly lenticular packages of interbedded sandy turbidites, slurry-flow deposits, and siltstone that are interpreted to record lobe deposition in an unconfined to weakly ponded setting; (2) the overlying, 2500 m thick and shale-dominated Cerro Toro Formation includes a succession of stacked conglomeratic and sandstone channel-fill deposits with associated finer-grained overbank deposits interpreted to record deposition in a foredeep-axial channel-levee system; (3) the final phase of deep-water sedimentation is characterized by sandstone-rich successions of highly variable thickness and cross-sectional geometry and mudstone-rich mass transport deposits (MTDs) that are interpreted to record deposition at the base-of-slope and lower slope segments of a prograding delta-fed slope system. The deep-water formations are capped by shallow-marine and deltaic deposits of the Dorotea Formation.These architectural changes are associated with the combined influences of tectonically driven changes and intrinsic evolution, including: (1) the variability of amount and type of source material, (2) variations in basin shape through time, and (3) evolution of the fill as a function of prograding systems filling the deep-water accommodation. While the expression of these controls in the stratigraphic architecture of other deep-water successions might differ in detail, the controls themselves are common to all deep-water basins. Information about source material and basin shape is contained within the detrital record and, when integrated and analyzed within the context of stratigraphic patterns, attains a more robust linkage of processes to products than stratigraphic characterization alone.     

Sedimentological criteria to differentiate submarine channel levee subenvironments: Exhumed examples from the Rosario Fm. (Upper Cretaceous) of Baja California, Mexico, and the Fort Brown Fm. (Permian), Karoo Basin, S. Africa

Two scales of levee confinement are commonly recognised from submarine channel-levee systems on the seafloor and in the subsurface. Large-scale external levees bound the entire system whilst smaller-scale internal levees bound individual thalweg channels within the channel-belt. Although thin beds are commonly identified in core and well logs, their origin, and consequently their stratigraphic significance is currently poorly understood. This knowledge gap stems, in part, from the lack of unambiguously identified outcrop analogues of channel-levees, and in particular the lack of identifiable internal and external levees. Here we report from two exhumed channel-levee systems where both scales of confinement can be recognised: the Rosario Fm. of Baja California, and the Fort Brown Fm. of South Africa. A suite of characteristic sedimentary features are recognised from internal and external levees respectively: internal levees are characterised by structures indicative of complexity in the waxing-waning style of overspill, interactions with topography and flow magnitude variability; in contrast, external levees are characterised by structures indicative of simple surge-like waning flows, relatively uniform flow directions, laterally extensive beds, and a lack of erosive events. Using these observations, together with published literature, we propose a simple nomenclatural scheme for levee sub-environments, and criteria to differentiate between levee sub-environments in core or outcrop.