Modelling the time course of shade,temperature, and wood recovery in streams with riparian forest restoration

Action is increasingly being taken in New Zealand and elsewhere to restore ecological function to streams through planting of riparian zones. We used simulation modelling to explore the relative performance of three strategies to restore the riparian zone of a pastoral stream to native forest by: (1) passive regeneration; (2) planting then abandonment of a Pinus radiata plantation; and (3) active restoration by planting selected native trees. We linked the forest model LINKNZ with a shade and temperature model (sWAIORA), and a wood model (OSU_STREAMWOOD) to simulate recovery trajectories for key forest stream attributes in hypothetical streams (1.3–14.0 m channel width) in the central North Island, New Zealand. Both active restoration strategies outperformed passive regeneration in shade, temperature and stream wood volume for most of the simulation time (800 years). Although the abandoned pine plantation provided greatest shade initially (<100 years), active native planting provided the greatest benefits overall. In general, recovery of stream shade (and temperature) is expected within decades, is accelerated by deliberate planting, and is fastest in small streams in which thermal stress from sunlight exposure is greatest. However, full recovery of stream and riparian function may take centuries, being dependent on large trees providing wood to structure the channel.     

Baseflow water chemistry in New Zealand rivers 1. Characterisation

In late summer to autumn 1987, 96 rivers throughout New Zealand were sampled in baseflow (< median flow) conditions, usually on three separate occasions. A wide range of water quality determinands were analysed to characterise water quality comprehensively at lower than median flows. River waters in New Zealand range widely in composition, particularly plant nutrients, but tend to be more dilute than world average freshwater (WAFW) because run‐off (specific yield) of water is generally high. Sodium and calcium are the most important cations in New Zealand rivers which can be described as “calcium‐sodium bicarbonate waters”, whereas WAFW is calcium bicarbonate water. Almost all river sites met existing guidelines and standards for drinking water, ecological protection, and freshwater fisheries.     

Land use effects on habitat,water quality,periphyton, and benthic invertebrates in Waikato,New Zealand,hill‐country streams

Water quality, habitat, and biota were compared during spring amongst c. 100 m reaches on 11 streams draining pasture, native (podocarp‐broadleaf) forest, and exotic pine forest established on pasture 15 years previously. Differences were greatest between the pasture and native forest streams. Only 1–3% of incident light reached native and pine forest streams whereas 30% reached pasture streams. Pasture streams had 2.2°C higher mean temperature than the native streams, and 5‐fold higher nitrate, 30‐fold higher algal biomass, and 11‐fold higher gross photosynthesis. Native streams were 60% wider than pasture, with pine streams intermediate. Pine and pasture streams had 3‐fold higher suspended solids and fine sediment stored in the streambed than native streams. Woody debris volume was 17‐fold greater in pine than pasture streams, with native streams intermediate. Invertebrate taxa richness did not differ between land uses. Community composition differed most between pasture and native forest, with pine forest streams intermediate. Invertebrate densities were 3‐fold higher in pasture than native streams, mainly because of more chironomids and snails, but mayflies, stoneflies, and caddisflies densities were 2–3‐fold higher in forest streams than pasture.     

Environmental predictors of decapod species richness and turnover along an extensive Australian continental margin (13–35° S)

The use of environmental data in biogeographic studies of the deep sea is providing greater insight into the processes underlying large‐scale patterns of diversity. Recent surveys of Australia's western continental margin (~100–1100 m) provide systematic sampling of invertebrate megafauna along a gradient of 22° of latitude (13–35° S). Diversity patterns of decapod crustaceans were examined and we investigated the relative importance of environmental and spatial predictor variables on both species richness (alpha diversity) and species turnover. Distance‐based linear models (DistLM) indicated a suite of variables were important in predicting species turnover, of which temperature and oxygen were the most influential. These reflected the oceanographic features that dominate distinct depth bathomes along the slope. The numbers of species within samples were highly variable; a small but significant increase in diversity towards the tropics was evident. Replicated sampling along the margin at ~100 m and ~400 m provided an opportunity to compare latitudinal patterns of diversity at different depths. On the shallow upper slope (~400 m) temperature was disassociated from latitude and the latter proved to be the best predictor of sample species richness. The predictive power of latitude over other variables indicates that proximity to the highly diverse Indo‐West Pacific (IWP) may be important, especially considering that almost 40% of species in this study had a wide IWP distribution. In the management of Australia's marine environments, geomorphic surrogates have been emphasised when defining areas for protection. We found sea‐floor characteristics were relatively less important in predicting richness or community composition.     

Non-hydrostatic and non-linear contributions to the internal wave energy flux in sill regions

A three-dimensional non-linear, non-hydrostatic model in cross-sectional form is used to determine the factors influencing the relative importance of the linear, non-hydrostatic and non-linear contributions to the internal wave energy flux in sill regions due to tidal forcing. The importance of the free surface elevation term is also considered. Idealised topography representing the sill at the entrance to Loch Etive, the site of a recent measurement programme, is used. Calculations show that the non-linear terms in the energy flux become increasingly important as the sill Froude Number (F _s) increases and the sill aspect ratio is increased. The vertical profile of the stratification, in particular its value close to the sill crest where internal waves are generated, has a significant influence on unsteady lee wave and mixed tidal–lee wave generation and the non-linear contribution to the energy flux. Calculations show that as F _s increases, the energy flux due to the non-linear and non-hydrostatic terms increases more rapidly than the linear term. The importance of the non-linear terms in the energy flux also increases as the sill aspect ratio is increased. Increasing the buoyancy frequency reduces the contribution of the non-hydrostatic and non-linear terms to the total energy flux. Also, as the buoyancy frequency is increased, this reduces unsteady lee wave and mixed tidal–lee wave generation. In essence, these calculations show that the energy flux due to the non-hydrostatic and non-linear terms is appreciable in sill regions.     

Differential compaction due to the irregular topology of a diagenetic reaction boundary: a new mechanism for the formation of polygonal faults

We propose a new mechanism for the formation of some polygonal fault arrays. Seismically imaged opal-A (biogenic silica) to opal-CT (cristobalite and tridymite) diagenetic boundaries from two regions offshore of Norway have developed regular wavelength patterns. The pattern consists of cell-shaped elevations that are 200–2600 m wide and up to 200 m high, separated by troughs. The cells represent regions that undergo diagenesis at shallower burial depths, earlier than adjacent areas. The chemical change leads to mechanical compaction and porosity reduction; therefore subsidence occurs above the cells in the overburden. Roughly circular depressions form above the cells, and a network of folds form above inter-cell areas. Networks of normal faults form on the crests and margins of the folds as a result of flexure during the folding. The progressive lateral growth of the cells causes the depressions to widen and intervening folds to narrow resulting in new differential compaction-induced faults to form with variable strike orientations. Lateral and vertical growth of cells leads to cells conjoining and the re-establishment of a uniform planar reaction boundary. This novel but simple mechanism can explain some polygonal fault arrays that form above opal-A to opal-CT reaction boundaries and in these settings the mechanism should be considered in addition to syneresis, density inversion or low coefficients of residual friction which are the most commonly cited drivers for polygonal fault systems.     

Concentration and distribution of hydrophobic organic contaminants and metals in the estuaries of Ukraine

In this study of Ukrainian estuaries, sediments and tissues from the Dnieper and Boh estuaries and Danube Delta on the mainland, Sevastopol and Balaklava Bays on the Crimean Peninsula, and coastal Black Sea along the Crimean Peninsula were collected in 2006. Contaminant analyses included several metals, the hydrophobic organic chemicals (HOCs) polychlorinated biphenyls, several chlorinated pesticides, and polycyclic aromatic hydrocarbons. When compared to estuarine sediments globally, the Ukrainian sediments were found to be moderately contaminated. However, several metals, especially mercury, were often shown to be elevated in the tissues of the Ukrainian organisms in comparison to organisms from other estuarine locations. Sediment quality guidelines indicate some of the estuarine sediments could be sufficiently contaminated to cause adverse toxicological effects. This investigation represents the first extensive study of HOC and metal baseline concentrations and distributions in Ukrainian estuaries and seeks to characterize exposures to aquatic organisms living in these systems.     

Petrology of lavas from the 2004–2005 flank eruption of Mt. Etna,Italy: inferences on the dynamics of magma in the shallow plumbing system

Following the 2001 and 2002–2003 flank eruptions, activity resumed at Mt. Etna on 7 September 2004 and lasted for about 6 months. This paper presents new petrographic, major and trace element, and Sr–Nd isotope data from sequential samples collected during the entire 2004–2005 eruption. The progressive change of lava composition allowed defining three phases that correspond to different processes controlling magma dynamics inside the central volcano conduits. The compositional variability of products erupted up to 24 September is well reproduced by a fractional crystallization model that involves magma already stored at shallow depth since the 2002–2003 eruption. The progressive mixing of this magma with a distinct new one rising within the central conduits is clearly revealed by the composition of the products erupted from 24 September to 15 October. After 15 October, the contribution from the new magma gradually becomes predominant, and the efficiency of the mixing process ensures the emission of homogeneous products up to the end of the eruption. Our results give insights into the complex conditions of magma storage and evolution in the shallow plumbing system of Mt. Etna during a flank eruption. Furthermore, they confirm that the 2004–2005 activity at Etna was triggered by regional movements of the eastern flank of the volcano. They caused the opening of a complex fracture zone extending ESE which drained a magma stored at shallow depth since the 2002–2003 eruption. This process favored the ascent of a different magma in the central conduits, which began to be erupted on 24 September without any significant change in eruptive style, deformation, and seismicity until the end of eruption.     

Living a century in warm thermal conditions: introduced populations of Pumpkinseed (Lepomis gibbosus) inhabiting the Iberian Peninsula (Spain) show reduced adaptation to North American winter conditions

In this study, we demonstrate that non-native Pumpkinseed (Lepomis gibbosus) introduced into Spanish water-bodies almost 100 years ago have a reduced capacity to tolerate winter conditions typically experienced by northern native populations. Overwinter survival and changes in lean weight and lipid content of Pumpkinseed from artificial colonies established from two Canadian and two Iberian source populations were compared under winter conditions typically experienced in the northern native range. Adult survival in outdoor ponds was higher in Canadian populations (68 and 78 %) than Iberian populations (31 and 49 %). Under simulated winter conditions in the laboratory, juvenile Iberian Pumpkinseed experienced higher mortality earlier in the winter period than Canadian populations. Lipid content of Iberian juveniles decreased on average by 49 % during the first half of the winter, while that of Canadian populations decreased by only 12–20 %. These results indicate that Iberian Pumpkinseed have lower tolerance of winter conditions relative to native Canadian populations, and suggest that relatively short exposure to warm climates can result in adaptive change in the physiology and bioenergetics of wild fish populations.     

Spatial distribution of phytoplankton cells in small elongated lakes subject to weak diurnal wind forcing

The horizontal distribution of phytoplankton in a medium-size canyon type reservoir, forced by weak winds of 3–4 ms^?1, is largely driven by the interaction of the large-scale circulation and processes regulating the vertical distribution of algal cells in the water column. These drivers, in turn, are subject to diurnal variations, making our understanding of the horizontal distribution of phytoplankton a challenging task. A three-dimensional physical-–ecological model is used to understand the spatial distribution of algae and the role of diurnal variations in the physical–biological drivers. The model was used to demonstrate that the large-scale circulation induced during the day is more efficient generating patchiness than the circulation existing at night, when convectively driven turbulence homogenizes the upper layers. Different spatial distributions develop for different populations and under different forcing scenarios, characterized in terms of the directionality of wind forcing, wind magnitude and the lags between winds and diel heat fluxes. The time scales needed so that algal biomass in the surface exhibit significant longitudinal gradients—T _P —will vary depending on the algal group, and its ability to regulate its vertical position. These scales are shorter for those species that either migrate actively in the water column or exhibit positive buoyancy (Cryptophytes or Positive buoyant algae). In El Gergal, these scales T _P are on the order of a few days. Synoptic changes in the meteorological forcing, like the passing of a front, could potentially change the longitudinal distribution of algal biomass if they persist for periods of time longer than T _P .