The Development of the Chagas' Online Data Entry System (CODES-GIS)

This article describes a web‐based data entry and GIS‐driven mapping system designed for an ethnographic and entomological survey of Chagas’ disease, an emerging zoonotic disease, and Triatoma dimidiata, a primary vector, in the Los Tuxtlas region of Veracruz, Mexico. To better understand this disease in the region, a collaborative, multi‐disciplinary study was initiated to conduct a spatial investigation of T. dimidiata and a community‐by‐community survey of local perceptions of the disease. In order to facilitate such a collaborative effort the CODES‐GIS was developed. This system allows for (near) real‐time mapping, analyses, disease reporting, and results sharing. CODES‐GIS provides a framework for a research team working in a remote area with limited technology, software, or GIS expertise to benefit from (near) real‐time spatial analyses performed at collaborating institutions. The system is bi‐directional, where field personnel can upload data to the system for field‐based map production. Likewise, laboratory personnel can upload diagnostics data for viewing by field personnel. In this way, the system provides a virtual link between the field and the laboratory to increase the speed at which results are returned to the local community. The CODES‐GIS is described along with a selection of study results.     

Preserving Ground Water Samples With Hydrochloric Acid Does Not Result in the Formation of Chloroform

Water samples collected for the determination of volatile organic compounds (VOCs) are often preserved with hydrochloric acid (HCl) to inhibit the biotransformation of the analytes of interest until the chemical analyses can he performed. However, it is theoretically possible that residual free chlorine in the HCl can react with dissolved organic carbon (DOC) to form chloroform via the haloform reaction. Analyses of 1501 ground water samples preserved with HCl from the U.S. Geological Survey's National Water-Quality Assessment Program indicate that chloroform was the most commonly detected VOC among 60 VOCs monitored. The DOC concentrations were not significantly larger in samples with detectable chloroform than in those with no delectable chloroform, nor was there any correlation between the concentrations of chloroform and DOC. Furthermore, chloroform was detected more frequently in shallow ground water in urban areas (28.5% of the wells sampled) than in agricultural areas (1.6% of the wells sampled), which indicates that its detection was more related to urban land-use activities than to sample acidification. These data provide strong evidence that acidification with HCl does not lead to the production of significant amounts of chloroform in ground water samples. To verify these results, an acidification study was designed to measure the concentrations of all trihalomethanes (THMs) that can form as a result of HCl preservation in ground water samples and to determine if ascorbic acid (C₆H₈O₆) could inhibit this reaction if it did occur. This study showed that no THMs were formed as a result of HCl acidification, and that ascorbic acid had no discernible effect on the concentrations of THMs measured.     

Professional Technologies in Schools: The Role of Pedagogical Knowledge in Teaching With Geospatial Technologies

Preparing learners for the future requires twenty-first-century teaching that integrates professional tools in the classroom. Geospatial technologies (GST), which represent geographical professional technologies, lack robust integration in high school geography. Researchers continue to ask why educators teach about rather than with GST. Understanding teacher decisions is paramount. This mixed methods study examined commonalities among teachers who use GST using Mishra and Koehler’s (2006 Mishra, P., and M. J. Koehler. 2006. Technological pedagogical content knowledge: A framework for teacher knowledge. Teachers College Record 108 (6):1017–54.[Crossref], [Web of Science ®] , [Google Scholar]) Technological, Pedagogical, Content Knowledge (TPCK) framework as a theoretical lens. This investigation examined whether geography teachers who exhibit stronger geospatial TPCK used GST more frequently than other teachers who exhibited a less developed knowledge base.     

Forecast of Tsunamis from the Japan–Kuril–Kamchatka Source Region

This paper describes an investigation of the subfault distribution along the Japan–Kuril–Kamchatka subduction zone for the implementation of a far-field tsunami forecast algorithm. Analyses of seismic data from 1900 to 2000 define the subduction zone, which in turn is divided into 222 subfaults based on the fault characteristics. For unit slip of the subfaults, a linear long-wave model generates a database of mareograms at water-level stations along the subduction zone and at warning points in the North Pacific. When a tsunami occurs, an inverse algorithm determines the slip distribution from near-source water-level records and predicts the waveforms at the warning points using the pre-computed mareograms. A jackknife resampling scheme uses combinations of input water-level records to provide a series of waveform predictions for the computation of the confidence-interval bounds. The inverse algorithm is applied to hindcast two major tsunamis generated from the Japan–Kuril–Kamchatka source and the computed tsunami heights show good agreement with recorded water-level data.     

Chemical remobilization of contaminant metals within floodplain sediments in an incising river system: implications for dating and chemostratigraphy

Metals such as Pb, Zn, Cd and Cu from historical mining activity have been used as stratigraphic markers for dating and provenancing vertically accreted, fine-grained floodplain overbank deposits. This study presents evidence for chemical remobilization of these metals within overbank sediments in the Tyne basin, UK. The evidence includes: breakdown of metal-bearing minerals (sulphides, carbonates, iron and manganese oxyhydroxides); shifts of chemical fractions within zones of relatively low pH towards more soluble and reactive phases; and accumulation of secondary iron and manganese oxyhydroxides at levels related to fluctuating water-table levels or to the breakdown of organic matter. All of this suggests that fine, centimetre-scale, chemostratigraphy using metal concentrations and ratios is unlikely to provide reliable data in river systems that have experienced, or are experiencing, major changes in water-table levels, or pedogenesis. Coarse tens of centimetre- to metre-scale, chemostratigraphy, when applied with caution, may still provide a means of delineating contaminated units. © 1998 John Wiley & Sons, Ltd.     

The dual isotopes of deep nitrate as a constraint on the cycle and budget of oceanic fixed nitrogen

We compare the output of an 18-box geochemical model of the ocean with measurements to investigate the controls on both the mean values and variation of nitrate δ¹⁵N and δ¹⁸O in the ocean interior. The δ¹⁸O of nitrate is our focus because it has been explored less in previous work. Denitrification raises the δ¹⁵N and δ¹⁸O of mean ocean nitrate by equal amounts above their input values for N₂ fixation (for δ¹⁵N) and nitrification (for δ¹⁸O), generating parallel gradients in the δ¹⁵N and δ¹⁸O of deep ocean nitrate. Partial nitrate assimilation in the photic zone also causes equivalent increases in the δ¹⁵N and δ¹⁸O of the residual nitrate that can be transported into the interior. However, the regeneration and nitrification of sinking N can be said to decouple the N and O isotopes of deep ocean nitrate, especially when the sinking N is produced in a low latitude region, where nitrate consumption is effectively complete. The δ¹⁵N of the regenerated nitrate is equivalent to that originally consumed, whereas the regeneration replaces nitrate previously elevated in δ¹⁸O due to denitrification or nitrate assimilation with nitrate having the δ¹⁸O of nitrification. This lowers the δ¹⁸O of mean ocean nitrate and weakens nitrate δ¹⁸O gradients in the interior relative to those in δ¹⁵N. This decoupling is characterized and quantified in the box model, and agreement with data shows its clear importance in the real ocean. At the same time, the model appears to generate overly strong gradients in both δ¹⁸O and δ¹⁵N within the ocean interior and a mean ocean nitrate δ¹⁸O that is higher than measured. This may be due to, in the model, too strong an impact of partial nitrate assimilation in the Southern Ocean on the δ¹⁵N and δ¹⁸O of preformed nitrate and/or too little cycling of intermediate-depth nitrate through the low latitude photic zone.     

Implications of land use change on the national terrestrial carbon budget of Georgia

Background  

Globally, the loss of forests now contributes almost 20% of carbon dioxide emissions to the atmosphere. There is an immediate need to reduce the current rates of forest loss, and the associated release of carbon dioxide, but for many areas of the world these rates are largely unknown. The Soviet Union contained a substantial part of the world's forests and the fate of those forests and their effect on carbon dynamics remain unknown for many areas of the former Eastern Bloc. For Georgia, the political and economic transitions following independence in 1991 have been dramatic. In this paper we quantify rates of land use changes and their effect on the terrestrial carbon budget for Georgia. A carbon book-keeping model traces changes in carbon stocks using historical and current rates of land use change. Landsat satellite images acquired circa 1990 and 2000 were analyzed to detect changes in forest cover since 1990.     

Environmental prognostics: an integrated model supporting lysosomal stress responses as predictive biomarkers of animal health status

The potential prognostic use of lysosomal reactions to environmental pollutants is explored in relation to predicting animal health in marine mussels, based on diagnostic biomarker data. Cellular lysosomes are already known to accumulate many metals and organic xenobiotics and the lysosomal accumulation of the carcinogenic polycyclic aromatic hydrocarbon 3-methylcholanthrene (3-MC) is demonstrated here in the hepatopancreatic digestive cells and ovarian oocytes of the blue mussel. Lysosomal membrane integrity or stability appears to be a generic indicator of cellular well-being in eukaryotes; and in bivalve molluscs it is correlated with total oxygen and nitrogen radical scavenging capacity (TOSC), protein synthesis, scope for growth and larval viability; and inversely correlated with DNA damage (micronuclei), as well as lysosomal swelling (volume density), lipidosis and lipofuscinosis, which are all characteristic of failed or incomplete autophagy. Integration of multiple biomarker data is achieved using multivariate statistics and then mapped onto "health status space" by using lysosomal membrane stability as a measure of cellular well-being. This is viewed as a crucial step towards the derivation of explanatory frameworks for prediction of pollutant impact on animal health; and has facilitated the development of a conceptual mechanistic model linking lysosomal damage and autophagic dysfunction with injury to cells, tissues and the whole animal. This model has also complemented the creation and use of a cell-based bioenergetic computational model of molluscan hepatopancreatic cells that simulates lysosomal and cellular reactions to pollutants. More speculatively, the use of coupled empirical measurements of biomarker reactions and modelling is proposed as a practical approach to the development of an operational toolbox for predicting the health of the environment.     

The masses, radii and luminosities of the components of U Geminorum

We present a phase-resolved spectroscopic study of the secondary star in the cataclysmic variable (CV) U Gem. We use our data to measure the radial velocity semi-amplitude, systemic velocity and rotational velocity of the secondary star. Combining this with literature data allows us to determine masses and radii for both the secondary star and white dwarf, which are independent of any assumptions about their structure. We use these to compare their properties to those of field stars and find that both components follow field mass–radius relationships. The secondary star has the mass, radius, luminosity and photometric temperature of an M2 star, but a spectroscopic temperature of M4. The latter may well be due to a high metallicity. There is a troubling inconsistency between the radius of the white dwarf inferred from its gravitational redshift and inclination and that inferred from its temperature, flux and astrometric distance.
We find that there are two fundamental limits to the accuracy of the parameters we can derive. First, the radial velocity curve of the secondary star deviates from a sinusoid, in part because of its asphericity (which can be modelled) and in part because the line flux is not evenly distributed over its surface. Secondly, we cannot be certain which spectral type is the best match for the lines of the secondary star, and the derived rotational velocity is a function of the spectral type of the template star used.     

High resolution polarimetric radar scattering measurements of lowgrazing angle sea clutter

This paper presents fully polarimetric radar scattering measurements of low grazing angle sea clutter. The measurements were obtained at a three degree grazing angle using a high range resolution (1.5 m) X-Band polarimetric radar operated from a shore site overlooking the Chesapeake Bay. The radar employs pulse-to-pulse switching between orthogonal transmitted polarizations and simultaneously measures two orthogonally polarized components of the backscattered wave to obtain full polarimetric information about the scattering process. The complete Stokes matrix, computed by averaging successive realizations of the polarization scattering matrix, is used to obtain polarization signatures and to determine the polarization dependence of the clutter. Sea spike echoes are shown to be weakly polarized and to exhibit polarization signatures indicative of multiple independent scattering mechanisms. Clutter echoes in the absence of sea spikes are shown to be highly polarized and to exhibit polarization signatures indicative of a single dominant scattering mechanism