Characterizing Observed Environmental Variability With HF Doppler Radar Surface Current Mappers and Acoustic Doppler Current Profilers: Environmental Variability in the Coastal Ocean

A network of high-frequency (HF) radars is deployed along the New Jersey coast providing synoptic current maps across the entire shelf. These data serve a variety of user groups from scientific research to Coast Guard search and rescue. In addition, model forecasts have been shown to improve with surface current assimilation. In all applications, there is a need for better definitions and assessment of the measurement uncertainty. During a summer coastal predictive skill experiment in 2001, an array of in situ current profilers was deployed near two HF radar sites, one long-range and one standard-range system. Comparison statistics were calculated between different vertical bins on the same current profiler, between different current profilers, and between the current profilers and the different HF radars. The velocity difference in the vertical and horizontal directions were then characterized using the observed root-mean-square (rms) differences. We further focused on two cases, one with relatively high vertical variability, and the second with relatively low vertical variability. Observed differences between the top bin of the current profiler and the HF radar were influenced by both system accuracy and the environment. Using the in situ current profilers, the environmental variability over scales based on the HF radar sampling was quantified. HF radar comparisons with the current profilers were on the same order as the observed environmental difference over the same scales, indicating that the environment has a significant influence on the observed differences. Velocity variability in the vertical and horizontal directions both contribute to these differences. When the potential effects of the vertical variability could be minimized, the remaining difference between the current profiler and the HF radar was similar to the measured horizontal velocity difference (~2.5 cm/s) and below the resolution of the raw radial data at the time of the deployment     

SeagrassNet monitoring across the Americas: case studies of seagrass decline

Seagrasses are an important coastal habitat worldwide and are indicative of environmental health at the critical land–sea interface. In many parts of the world, seagrasses are not well known, although they provide crucial functions and values to the world's oceans and to human populations dwelling along the coast. Established in 2001, SeagrassNet, a monitoring program for seagrasses worldwide, uses a standardized protocol for detecting change in seagrass habitat to capture both seagrass parameters and environmental variables. SeagrassNet is designed to statistically detect change over a relatively short time frame (1–2 years) through quarterly monitoring of permanent plots. Currently, SeagrassNet operates in 18 countries at 48 sites; at each site, a permanent transect is established and a team of people from the area collects data which is sent to the SeagrassNet database for analysis. We present five case studies based on SeagrassNet data from across the Americas (two sites in the USA, one in Belize, and two in Brazil) which have a common theme of seagrass decline; the study represents a first latitudinal comparison across a hemisphere using a common methodology. In two cases, rapid loss of seagrass was related to eutrophication, in two cases losses related to climate change, and in one case, the loss is attributed to a complex trophic interaction resulting from the presence of a marine protected area. SeagrassNet results provide documentation of seagrass change over time and allow us to make scientifically supported statements about the status of seagrass habitat and the extent of need for management action.     

Reduction of hydroelastic responses of a very-long floating structure by a floating oscillating-water-column breakwater system

The hydroelastic responses of a very-long floating structure (VLFS) placed behind a reverse T-shape freely floating breakwater with a built-in oscillating water column (OWC) chamber are analyzed in two dimensions. The Bernoulli–Euler beam equation is coupled with the equations of rigid and elastic motions of the breakwater and the VLFS. The interaction of waves between the floating rigid breakwater and the elastic VLFS is formulated in a consistent manner. It has been shown numerically that the structural deflections of the VLFS can be reduced significantly by a suitably designed reverse T-shape floating breakwater.     

Oceanographic influences on seabirds and cetaceans of the eastern tropical Pacific: A review

This paper is part of a comprehensive review of the oceanography of the eastern tropical Pacific, the oceanic region centered on the eastern Pacific warm pool, but also including the equatorial cold tongue and equatorial current system, and summarizes what is known about oceanographic influences on seabirds and cetaceans there. The eastern tropical Pacific supports on the order of 50 species of seabirds and 30 species of cetaceans as regular residents; these include four endemic species, the world’s largest populations for several others, three endemic sub-species, and a multi-species community that is relatively unique to this ecosystem. Three of the meso-scale physical features of the region are particularly significant to seabirds and cetaceans: the Costa Rica Dome for blue whales and short-beaked common dolphins, the Equatorial Front for planktivorous seabirds, and the countercurrent thermocline ridge for flocking seabirds that associate with mixed-species schools of spotted and spinner dolphins and yellowfin tuna. A few qualitative studies of meso- to macro-scale distribution patterns have indicated that some seabirds and cetaceans have species-specific preferences for surface currents. More common are associations with distinct water masses; these relationships have been quantified for a number of species using several different analytical methods. The mechanisms underlying tropical species–habitat relationships are not well understood, in contrast to a number of higher-latitude systems. This may be due to the fact that physical variables have been used as proxies for prey abundance and distribution in species–habitat research in the eastern tropical Pacific.Though seasonal and interannual patterns tend to be complex, species–habitat relationships appear to remain relatively stable over time, and distribution patterns co-vary with patterns of preferred habitat for a number of species. The interactions between seasonal and interannual variation in oceanographic conditions with seasonal patterns in the biology of seabirds and cetaceans may account for some of the complexity in species–habitat relationship patterns.Little work has been done to investigate effects of El Niño-Southern Oscillation cycles on cetaceans, and results of the few studies focusing on oceanic seabirds are complex and not easy to interpret. Although much has been made of the detrimental effects of El Niño events on apex predators, more research is needed to understand the magnitude, and even direction, of these effects on seabirds and cetaceans in space and time.     

Determination of phospholipid fatty acid structures and stable carbon isotope compositions of deep-sea sediments of the Northwest Pacific, ODP site 1179

Sediment samples ranging from 0.05 to 278 m below sea floor (mbsf) at a Northwest Pacific deep-water (5564 mbsl) site (ODP Leg 191, Site 1179) were analyzed for phospholipid fatty acids (PLFAs). Total PLFA concentrations decreased by a factor of three over the first meter of sediment and then decreased at a slower rate to approximately 30 mbsf. The sharp decrease over the first meter corresponds to the depth of nitrate and Mn(IV) reduction as indicated by pore water chemistry. PLFA-based cell numbers at site 1179 had a similar depth profile as that for Acridine orange direct cell counts previously made on ODP site 1149 sediments which have a similar water depth and lithology. The mole percentage of straight chain saturated PLFAs increases with depth, with a large shift between the 0.95 and 3.95 mbsf samples. PLFA stable carbon isotope ratios were determined for sediments from 0.05 to 4.53 mbsf and showed a general trend toward more depleted δ¹³C values with depth. Both of these observations may indicate a shift in the bacterial community with depth across the different redox zones inferred from pore water chemistry data. The PLFA 10me16:0, which has been attributed to the bacterial genera Desulfobacter in many marine sediments, showed the greatest isotopic depletion, decreasing from − 20 to − 35‰ over the first meter of sediment. Pore water chemistry suggested that sulfate reduction was absent or minimal over this same sediment interval. However, 10me16:0 has been shown to be produced by recently discovered anaerobic ammonium oxidizing (anammox) bacteria which are known chemoautotrophs. The increasing depletion in δ¹³C of 10me16:0 with the unusually lower concentration of ammonium and linear decrease of nitrate concentration is consistent with a scenario of anammox bacteria mediating the oxidation of ammonium via nitrite, an intermediate of nitrate reduction.     

Thermodynamic characterization of the partitioning of iron between soluble and colloidal species in the Atlantic Ocean

Recent electrochemical measurements have shown that iron (Fe) speciation in seawater is dominated by complexation with strong organic ligands throughout the water column and have provided important thermodynamic information about these compounds. Independent work has shown that iron exists in both soluble and colloidal fractions in the Atlantic Ocean. Here we have combined these approaches in samples collected from a variety of regimes within the Atlantic Ocean. We measured the partitioning of Fe between soluble (< 0.02 μm) and colloidal (0.02 to 0.4 μm) size classes and characterized the concentrations and conditional stability constants of Fe ligands within these size classes. Results suggest that equilibrium partitioning of Fe between soluble and colloidal ligands is partially responsible for the distribution of Fe between soluble and colloidal size classes. However, a significant fraction of the colloidal Fe was inert to ligand exchange as soluble Fe concentrations were generally lower than values predicted by a simple equilibrium partitioning model.In surface waters, strong ligands with conditional stability constants of 10¹³ relative to total inorganic Fe appeared to dominate speciation in both the soluble and colloidal fractions. In deep waters these ligands were absent, and instead we found ligands with stability constants 12–15 fold smaller that were predominantly in the soluble pool. Nevertheless, significant levels of colloidal Fe were found in these samples, which we inferred must be inert to coordination exchange.