Preindustrial, historical, and fertilization simulations using a global ocean carbon model with new parameterizations of iron limitation, calcification, and N2 fixation

The Canadian Model of Ocean Carbon (CMOC) has been developed as part of a global coupled climate carbon model. In a stand-alone integration to preindustrial equilibrium, the model ecosystem and global ocean carbon cycle are in general agreement with estimates based on observations. CMOC reproduces global mean estimates and spatial distributions of various indicators of the strength of the biological pump; the spatial distribution of the air-sea exchange of CO₂ is consistent with present-day estimates. Agreement with the observed distribution of alkalinity is good, consistent with recent estimates of the mean rain ratio that are lower than historic estimates, and with calcification occurring primarily in the lower latitudes. With anthropogenic emissions and climate forcing from a 1850-2000 climate model simulation, anthropogenic CO₂ accumulates at a similar rate and with a similar spatial distribution as estimated from observations. A hypothetical scenario for complete elimination of iron limitation generates maximal rates of uptake of atmospheric CO₂ of less than 1 PgC y⁻¹, or about 11% of 2004 industrial emissions. Even a ‘perfect’ future of sustained fertilization would have a minor impact on atmospheric CO₂ growth. In the long term, the onset of fertilization causes the ocean to take up an additional 77 PgC after several thousand years, compared with about 84 PgC thought to have occurred during the transition into the last glacial maximum due to iron fertilization associated with increased dust deposition.     

Simulation of nonlinear wave run-up with a high-order Boussinesq model

This paper considers the numerical simulation of nonlinear wave run-up within a highly accurate Boussinesq-type model. Moving wet–dry boundary algorithms based on so-called extrapolating boundary techniques are utilized, and a new variant of this approach is proposed in two horizontal dimensions. As validation, computed results involving the nonlinear run-up of periodic as well as transient waves on a sloping beach are considered in a single horizontal dimension, demonstrating excellent agreement with analytical solutions for both the free surface and horizontal velocity. In two horizontal dimensions cases involving long wave resonance in a parabolic basin, solitary wave evolution in a triangular channel, and solitary wave run-up on a circular conical island are considered. In each case the computed results compare well against available analytical solutions or experimental measurements. The ability to accurately simulate a moving wet–dry boundary is of considerable practical importance within coastal engineering, and the extension described in this work significantly improves the nearshore versatility of the present high-order Boussinesq approach.     

Biodiversity patterns of free-living marine nematodes in a tropical bay: Cienfuegos, Caribbean Sea

Spatial and temporal biodiversity patterns of free-living marine nematodes were studied in Cienfuegos Bay, a tropical semi-enclosed basin in the Caribbean Sea. Taxonomic (to species level) and functional (biological trait) approaches were applied for describing the assemblage structure and relating it to abiotic environment based on a sampling scheme in six subtidal stations and three months. Biological trait approach added relevant information to species pattern regarding relationships between diversity patterns and the abiotic environment. The most common morphotypes were deposit feeding nematodes, with colonising abilities of 2–3 (in a scale from 1 to 5), tail conical cylindrical or filiforme and body slender; and their abundance were correlated with depth, organic matter and silt/clay fraction. In spite of a high turnover of species, functional diversity of assemblages did not change notably in space and time. A result probably due to sampling of the habitat pool of species and to low heterogeneity of the studied muddy bottoms. Chemical pollution (organic enrichment and heavy metals) and hydrodynamic regime possibly drove the biodiversity patterns. Spatial distribution of assemblages support the existence of two well differentiated basins inside the bay, the northern basin more polluted than the southern one. The low hydrodynamic regime would determine a poor dispersion of nematodes resulting in high spatial variance in the assemblage structure; and also the associated hypoxic conditions and pollutants in sediments can explain the dominance of tolerant nematode species such as Daptonema oxycerca, Sabatieria pulchra, Terschellingia gourbaultae, and Terschellingia longicaudata. A comparison of spatial–temporal patterns of biodiversity between Cienfuegos Bay and other semi-enclosed bays in temperate regions suggests several similarities: nematode assemblages are strongly influenced by anthropogenic disturbance, temporal trends are weak or overridden by spatial ones, and few cosmopolitan genera/species tolerant to pollution and hypoxic conditions are dominant.     

Macroalgal turfs in the Azores

Studies on macroalgal communities of the Azores report algal turfs as one of the most conspicuous ecological entities occurring on the rocky shores of these islands. The present study investigates the influence of shore height and substratum on turf composition. Data were analysed using the software PRIMER and results confirmed the previous distinction between calcareous, dominated by articulated coralline algae, and non-calcareous turfs, characterized mainly by small red algae. However, no differences in species composition were found in either type of turf occurring on different substrata or at different shore levels.     

Daily variability of dissolved inorganic radiocarbon at three sites in the surface ocean

We report radiocarbon measurements of dissolved inorganic carbon (DIC) in surface water samples collected daily during cruises to the central North Pacific, the Sargasso Sea and the Southern Ocean. The ranges of Δ¹⁴C measurements for each cruise (11–30‰) were larger than the total uncertainty (7.8‰, 2-sigma) of the measurements. The variability is attributed to changes in the upper water mass that took place at each site over a two to four week period. These results indicate that variability of surface Δ¹⁴C values is larger than the analytical precision, because of patchiness that exists in the DIC Δ¹⁴C signature of the surface ocean. This additional variability can affect estimates of geochemical parameters such as the air–sea CO₂ exchange rate using radiocarbon.     

Mesozooplankton biomass and grazing responses to Cyclone Opal, a subtropical mesoscale eddy

As part of E-Flux III cruise studies in March 2005, plankton net collections were made to assess the effects of a cyclonic cold-core eddy (Cyclone Opal) on the biomass and grazing of mesozooplankton. Mesozooplankton biomass in the central region of Cyclone Opal, an area of uplifted nutricline and a subsurface diatom bloom, averaged 0.80±0.24 and 1.51±0.59 g DW m⁻², for day and night tows, respectively. These biomass estimates were about 80% higher than control (OUT) stations, with increases more or less proportionately distributed among size classes from 0.2 to >5 mm. Though elevated relative to surrounding waters south of the Hawaiian Islands (Hawai’i lee), total biomass and size distribution in Cyclone Opal were almost exactly the same as contemporary measurements made at Stn. ALOHA, 100 km north of the islands, by the HOT (Hawaii Ocean Time-series) Program. Mesozooplankton biomass and community composition at the OUT stations were also similar to ALOHA values from 1994 to 1996, preceding a recent decadal increase. These comparisons may therefore provide insight into production characteristics or biomass gradients associated with decadal changes at Stn. ALOHA. Gut fluorescence estimates were higher in Opal than in ambient waters, translating to grazing impacts of 0.11±0.02 d⁻¹ (IN) versus 0.03±0.01 d⁻¹ (OUT). Over the depth-integrated euphotic zone, mesozooplankton accounted for 30% of the combined grazing losses of phytoplankton to micro- and meso-herbivores in Opal, as compared to 13% at control stations. Estimates of active export flux by migrating zooplankton averaged 0.81 mmol C m⁻² d⁻¹ in Cyclone Opal and 0.37 mmol C m⁻² d⁻¹ at OUT stations, 53% and 24%, respectively, of the carbon export measured by passive sediment traps. Migrants also exported 0.18 mmol N m⁻² d⁻¹ (117% of trap N flux) in Cyclone Opal compared to 0.08 mmol N m⁻² d⁻¹ (51% of trap flux) at control stations. Overall, the food-web importance of mesozooplankton increased in Cyclone Opal both in absolute and relative terms. Diel migrants provided evidence for enhanced export flux in the eddy that was missed by sediment trap and ²³⁴Th techniques, and migrant-mediated flux was the major export term in the observed bloom-perturbation response and N mass balance of the eddy.     

Crustal transect across the North Atlantic

Two dimensional crustal models derived from four different ocean bottom seismographic (OBS) surveys have been compiled into a 1,580 km long transect across the North Atlantic, from the Norwegian Møre coast, across the extinct Aegir Ridge, the continental Jan Mayen Ridge, the presently active Kolbeinsey Ridge north of Iceland, into Scoresby Sund in East Greenland. Backstripping of the transect suggests that the continental break-up at ca. 55 Ma occurred along a west-dipping detachment localized near the western end of a ca. 300 km wide basin thinned to less than 20 km crustal thickness. It is likely that an east-dipping detachment near the present day Liverpool Land Escarpment was active during the late stages of continental rifting. A lower crustal high-velocity layer (7.2–7.4 km/s) interpreted as mafic intrusions/underplating, was present beneath the entire basin. The observations are consistent with the plume hypothesis, involving the Early Tertiary arrival of a mantle plume beneath central Greenland and focused decompression melting beneath the thinnest portions of the lithosphere. The mid-Eocene to Oligocene continental extension in East Greenland is interpreted as fairly symmetric and strongly concentrated in the lower crustal layer. Continental break-up which rifted off the Jan Mayen Ridge, occurred at ca. 25 Ma, when the Aegir Ridge became extinct. The first ca. 2 m.y. of oceanic accretion along the Kolbeinsey Ridge was characterized by thin magmatic crust (ca. 5.5 km), whereas the oceanic crustal formation since ca. 23 Ma documents ca. 8 km thick crust and high magma budget.     

Population structure of the sicklefin lemon shark Negaprion acutidens within the Curieuse Marine National Park,Seychelles

This study produced the first data on population parameters for sicklefin lemon shark Negaprion acutidens at the granitic Seychelles Islands, adding to a limited catalogue of species information. Juveniles at a site in the Curieuse Marine National Park were tagged over two periods, in 2014–2015 and 2015–2016, with measurements of length (precaudal, fork and total) and weight, sex, and state of the umbilical opening recorded. Recapture data were used to calculate growth rates and population size. Mean annual growth rate was 5.40 cm y^–1. A mean size at birth of 62.5 cm TL is in line with previous assessments of the species. Population-size estimates were similar for the two sampling periods (comprising 311 and 255 individuals) and higher than anticipated. Movements to outside the lagoon were recorded for early ages, and this, combined with weight loss and a reduction in condition factor as displayed in several individuals, suggests that the study area alone could not support the large number of sharks pupped yearly.