Geophysiology and Parahistology of the Interactions of Organisms with the Environment*

Abstract. Ecology and Global Ecology (GE) are terms by which the relations between the organism (or living matter as a whole) and the environment (or Earth as a whole) have been treated for almost a century. Geophysiology and Parahistology (PH) are terms slowly replacing older scientific thoughts jointly with an increasing number of modifications and alterations of the Darwinian Evolution (DE) concept. Somehow Geophysiology and Parahistology seem to describe evolution in a non-Darwinian domain. According to V.I. Vernadsky (1929,1930,1988) - the great Russian naturalist and biogeochemist - the biogeochemical processes on Earth are controlled by the force of living matter rather than by species associations developing in and with individual ecosystems as expressed by darwinian evolutionary terms. He also claimed that Goethe was incorrectly regarded as a predecessor of DE by some authors (including Darwin) and that “Natur” (nature) and “Lebendige Natur” (the totality of creatures) are two very different things for Goethe. Detailed analyses of microbial mat systems in the German Wadden Sea and in artificial hypersaline WInogradsky columns have shown that the totality of creatures and matter around them i.e., the “lebendige Natur”sensu Goethe or “living matter”sensu Vernadsky of such environments control to a considerable extent the structure, stability. and (geo-)morphology of sediments and thereby the geological structure of the living Earth. These structures do not follow the rules of sedimentation formulated by the laws of Stokes They represent growth structures (Aufwuchs), whose physics and dynamics are controlled by complex fractal systems. The factors controlling the ultimate shape and stabilisation potential of the eventually resulting rocks and fossils are comparable to tissue development in macroorganisms. Also, certain microbial associations in the sub-recent and in the fossil record may be compared to metazoan tissues. Chemical gradients in the sedimentary column, regulated by the interplay of living matter and sluggish (slow-reactive to non-reactive) compounds, combine to create a pattern of porosity and structure of the resulting deposits that clearly indicates microbial influences and especially those of extracellular polymeric substances on the morphology and texture. The combined effects of microbiota or living matter on the sedimentary record are described as parahistology of sediments in analogy of the histology of tissue on a geological scale. This conceptual living tissue made up of microbially generated rocks and ore deposits cycled through metabolic processes and forced into tissue-like structures by microbial biofilms and mats may extend down to the upper mantle of Earth and far up into the stratosphere when Earth is regarded as a living entity over geological periods. We may have to conceive Earth as a living specimen, which is breathing at a frequency of thousands of years instead of the normal physiological breathing rate of man or an insect. Macroorganisms in all terrestrial systems represent the transport and logistic media, which, however, utterly depend on myriads of intra-, inter-, and extracellular microbial symbiotic partners.     

Modern swathe sounding and sub-bottom profiling technology for research applications: The Atlas Hydrosweep and Parasound Systems

This chapter describes two separate but complementary research echosounder systems originally developed by Krupp Atlas Elektronik GmbH for the new German oceanographic research vessel Meteor.The Hydrosweep is a Hydrographic wide-swathe sweep survey echosounder for both shallow and deep water applications providing accurate bathymetric surveys and terrain-following navigation capabilities.The Parasound system is a hull-mounted dual channel parametric narrow-beam deep sea survey and sub-bottom profiling echosounder enabling particularly high vertical and horizontal resolution of seabed features.     

Three-dimensional visualization of mission planning and control forthe NPS autonomous underwater vehicle

The Naval Postgraduate School (NPS) is constructing a small autonomous underwater vehicle (AUV) with an onboard mission control computer. The mission controller software for this vehicle is a knowledge-based artificial intelligence (AI) system requiring thorough analysis and testing before the AUV is operational. The manner in which rapid prototyping of this software has been demonstrated by developing a controller code on a LISP machine and using an Ethernet link with a graphics workstation to simulate the controller's environment is discussed. The development of a testing simulator using a knowledge engineering environment (KEE) expert system shell that examines AUV controller subsystems and vehicle models before integrating them with the full AUV for its test environment missions is discussed. This AUV simulator utilizes an interactive mission planning control console and is fully autonomous once initial parameters are selected     

Trace metal concentrations in sediments of the Eastern Mississippi Bight

Sediments collected from 3 onshore-offshore transects (12 stations total) in the Eastern Mississippi Bight at 5 different times during 1987–1988 have been analyzed for total Ag, As, Ba, Cd, Co, Cr, Cu, Fe, Hg, Mn, Ni, Pb, Sb, Se, Sn, Th and Zn. The data show considerable variation both spatially and temporally, largely as a result of natural variability in grain size and mineralogy. Clay-rich samples from deep water were always more metal-rich than sandy samples from shallow areas. Many samples from near the Mississippi River Delta appeared to be enriched in Ba by about a factor of two, probably as a result of contamination from oil well drilling mud, but there were few other indications of pollution influences. Many samples from throughout the area gave Mn/Fe and Cd/Fe ratios a factor of two or more lower than their Mississippi River source material. This shows that biochemical activity in the sediment is capable of solubilizing reducible and adsorbed metals.     

The distributions of particulate atmospheric trace metals and mineral aerosols over the Indian Ocean

Data are presented for the concentrations of Al, Fe, Mn, Ni, Co, Cr, V, Cu, Zn, Pb and Cd in aerosols collected over two contrasting regions of the Indian Ocean. These are: (1) the northern Arabian Sea (AS), from which samples were collected in the northeast monsoon, during which the region receives an input of crustal material from the surrounding arid land masses; and (2) the Tropical Southern Indian Ocean (TSIO), a remote region from which samples were collected from air masses for which there were no large-scale up-wind continental aerosol sources. The TSIO samples can be divided into two populations: Population I aerosols, collected from air masses which have probably impinged on Madagascar, and Population II aerosols, which have been confined to open-ocean regions to the south of the area.The data indicate that there are strong latitudinal variations in the chemical signatures of aerosols over the Indian Ocean. The input of crustal material to the Arabian Sea gives rise to an average Al concentration of about 1000 ng m⁻³ of air in the northeast monsoon regime. As a result, the concentrations of all trace metals are relatively high, and the values of crustal enrichment factors are less than 10 for most metals, in the AS aerosols. In contrast, TSIO Population II ‘open-ocean southern air’ sampled during the southwest monsoon season, has an average Al concentration of only about 10 ng m⁻³ of air. Trace metal concentrations in the TSIO ‘open-ocean southern air’ during the southwest monsoon season are representative of ‘clean’ remote marine air and are generally similar to those reported over the central North Pacific.Mineral dust concentrations over the Indian Ocean decrease in a north to south direction, from about 15–20 μg m⁻³ of air in the extreme north to about 0.01–0.25 μg m⁻³ of air in the far south. The deposition of mineral dust over the northern Arabian Sea can account for approximately 75% of the non-carbonate material incorporated into the underlying sediments.In the Arabian Sea the dissolved atmospheric inputs of all the trace metals, with the exception of Cu and Co, exceed those from fluvial run-off by factors which range from 9.6 for Pb to 1.6 for Cr.     

Holocene sedimentation of a wave-dominated barrierisland shoreline: Cape Lookout, North Carolina

The sedimentary record of 130 km of microtidal (0.9 m tidal range) high wave energy (1.5 m average wave height) barrier island shoreline of the Cape Lookout cuspate foreland has been evaluated through examination of 3136 m of subsurface samples from closely spaced drill holes. Holocene sedimentation and coastal evolution has been a function of five major depositional processes: (1) eustatic sea-level rise and barrier-shoreline transgression; (2) lateral tidal inlet migration and reworking of barrier island deposits; (3) shoreface sedimentation and local barrier progradation; (4) storm washover deposition with infilling of shallow lagoons; and (5) flood-tidal delta sedimentation in back-barrier environments.

Twenty-five radiocarbon dates of subsurface peat and shell material from the Cape Lookout area are the basis for a late Holocene sea-level curve. From 9000 to 4000 B.P. eustatic sea level rose rapidly, resulting in landward migration of both barrier limbs of the cuspate foreland. A decline in the rate of sea-level rise since 4000 B.P. resulted in relative shoreline stabilization and deposition of contrasting coastal sedimentary sequences. The higher energy, storm-dominated northeast barrier limb (Core and Portsmouth Banks) has migrated landward producing a transgressive sequence of coarse-grained, horizontally bedded washover sands overlying burrowed to laminated back-barrier and lagoonal silty sands. Locally, ephemeral tidal inlets have reworked the transgressive barrier sequence depositing fining-upward spit platform and channel-fill sequences of cross-bedded, pebble gravel to fine sand and shell. Shoreface sedimentation along a portion of the lower energy, northwest barrier limb (Bogue Banks) has resulted in shoreline progradation and deposition of a coarsening-up sequence of burrowed to cross-bedded and laminated, fine-grained shoreface and foreshore sands. In contrast, the adjacent barrier island (Shackleford Banks) consists almost totally of inlet-fill sediments deposited by lateral tidal inlet migration. Holocene sediments in the shallow lagoons behind the barriers are 5–8 m thick fining-up sequences of interbedded burrowed, rooted and laminated flood-tidal delta, salt marsh, and washover sands, silts and clays.

While barrier island sequences are generally 10 m in thickness, inlet-fill sequences may be as much as 25 m thick and comprise an average of 35% of the Holocene sedimentary deposits. Tidal inlet-fill, back-barrier (including flood-tidal delta) and shoreface deposits are the most highly preservable facies in the wave-dominated barrier-shoreline setting. In the Cape Lookout cuspate foreland, these three facies account for over 80% of the sedimentary deposits preserved beneath the barriers. Foreshore, spit platform and overwash facies account for the remaining 20%.     

A statistical analysis of non-linear random waves

A statistical analysis of unidirectional non-linear random waves is presented which is based on second-order random wave theory. The analysis technique is similar to a method which is available for the statistical analysis of a two-term Volterra series. It is shown that the statistical problem can be reduced to that of finding the eigenvalues and eigenvectors of two real symmetric matrices, from which the cumulants, the characteristic function, and the probability density function of the surface elevation can be found. Various numerical examples are considered, and the possibility of extending the technique to deal with spreading seas is discussed.