A singular evolutive extended Kalman filter to assimilate ocean color data in a coupled physical–biochemical model of the North Atlantic ocean

Within the European DIADEM project, a data assimilation system for coupled ocean circulation and marine ecosystem models has been implemented for the North Atlantic and the Nordic Seas. One objective of this project is to demonstrate the relevance of sophisticated methods to assimilate satellite data such as altimetry, surface temperature and ocean color, into realistic ocean models. In this paper, the singular evolutive extended Kalman (SEEK) filter, which is an advanced assimilation scheme where three-dimensional, multivariate error statistics are taken into account, is used to assimilate ocean color data into the biological component of the coupled system. The marine ecosystem model, derived from the FDM model [J. Mar. Res. 48 (1990) 591], includes 11 nitrogen and carbon compartments and describes the synthesis of organic matter in the euphotic zone, its consumption by animals of upper trophic levels, and the recycling of detritic material in the deep ocean. The circulation model coupled to the ecosystem is the Miami isopycnic coordinate ocean model (MICOM), which covers the Atlantic and the Arctic Oceans with an enhanced resolution in the North Atlantic basin. The model is forced with realistic ECMWF ocean/atmosphere fluxes, which permits to resolve the seasonal variability of the circulation and mixed layer properties. In the twin assimimation experiments reported here, the predictions of the coupled model are corrected every 10 days using pseudo-measurements of surface phytoplankton as a substitute to chlorophyll concentrations measured from space. The diagnostics of these experiments indicate that the assimilation is feasible with a reduced-order Kalman filter of small rank (of order 10) as long as a sufficiently good identification of the error structure is available. In addition, the control of non-observed quantities such as zooplankton and nitrate concentrations is made possible, owing to the multivariate nature of the analysis scheme. However, a too severe truncation of the error sub-space downgrades the propagation of surface information below the mixed layer. The reduction of the actual state vector to the surface layers is therefore investigated to improve the estimation process in the perspective of sea-viewing wide field-of-view sensor (SeaWiFS) data assimilation experiments.     

Plankton distribution and vertical flux of biogenic matter during high summer stratification in the Krka estuary (Eastern Adriatic)

The aim of this study was to investigate phytoplankton abundance, composition and vertical export in the highly stratified Krka estuary, Croatia. The estuary is stratified throughout the year, and an interface between fresh- and brackish water plays an important role in production and degradation of biogenic matter. Vertical export of particulate organic carbon (POC), phytoplankton carbon (PPC) and faecal pellet carbon (FPC) was studied by deploying sediment traps in the middle and lower reach of the estuary and in the adjacent coastal zone. Zooplankton faecal pellet (FP) production experiments were conducted to provide additional information on the potential contribution of FP to the total carbon flux. High suspended concentrations of POC, chlorophyll a and phytoplankton was found in the lower reaches of the Krka estuary, adjacent to a source of anthropogenic eutrophication. The fraction of organic detritus to the total POC flux was 61–69% inside the estuary but only 7% at the marine station. This indicates that the primary producers in the surface layer of the Krka estuary are decomposed in and below the interface and then settle as detritus to the bottom. Low sedimentation rates in the coastal zone outside the estuary revealed that the eutrophication does not spread out of the estuary. Mesozooplankton played a modest role in vertical flux regulation, due to their low abundance and dominance of smaller forms as well as low faecal pellet production rates. It is concluded that processes taking place at the freshwater-seawater interface are of major importance for the vertical carbon flux in the investigated area.     

Seismic analyses of Cenozoic contourite drift development in the Northern Norwegian Sea

Four drift accumulations have been identified on the continental margin of northern Norway; the Lofoten Drift, the Vesterålen Drift, the Nyk Drift and the Sklinnadjupet Drift. Based on seismic character these drifts were found to belong to two main groups; (1) mounded, elongated, upslope accretion drifts (Lofoten Drift, Vesterålen Drift and Nyk Drift), and (2) infilling drifts (Sklinnadjupet Drift). The drifts are located on the continental slope. Mainly surface and intermediate water circulation, contrary to many North Atlantic and Antarctic drifts that are related to bottom water circulation, and sediment availability have controlled their growth. Sediments were derived both from winnowing of the shelf and upper slope and from ice sheets when present on the shelf. The main source area was the Vøring margin. This explains the high maximum average sedimentation rate of the nearby Nyk (1.2 m/ka) and Sklinnadjupet (0.5 m/ka) Drifts compared with the distal Lofoten (0.036 m/ka) and Vesterålen (0.060 m/ka) Drifts. The high sedimentation rate of the Nyk Drift, deposited during the period between the late Saalian and the late Weichselian is of the same order of magnitude as previously reported for glacigenic slope sediments deposited during glacial maximum periods only. The Sklinnadjupet Drift is infilling a paleo-slide scar. The development of the infilling drift was possible due to the available accommodation space, a slide scar acting as a sediment trap. Based on the formation of diapirs originating from the Sklinnadjupet Drift sediments we infer these sediments to have a muddy composition with relatively high water content and low density, more easily liquefied and mobilised compared with the glacigenic diamictons.     

Phytoremediation of small-scale oil spills in fresh marsh environments: a mesocosm simulation

Research was conducted to assess the impact of oiling on fresh-marsh plant communities and to test the efficacy of techniques that may be used to enhance the bioremediation of crude oil spills in these environments while minimizing secondary anthropogenic impacts. To emulate field conditions, a mesocosm facility was used that houses 120 mesocosm vessels, each of 200-1 capacity. A five-way factorial treatment arrangement was used that included two substrates (inorganic, organic), two nutrient regimes (fertilized, not fertilized), two aeration levels (substrate aeration, no aeration), three oiling concentrations (0-, 5-, 10-1 m(-2) of South Louisiana Sweet Crude oil), and four vascular plant species (Alternanthera philoxeroides, Panicum hemitomon, Phragmites australis, Sagittaria lancifolia, and an unplanted control). Under the 5- and 10-1 m(-2) oiling concentrations, S. lancifolia displayed a short-term response of increased productivity, whereas P. hemitomon had the highest biomass production and photosynthetic rates at the end of the 18-month experiment. Overall plant growth and productivity, as well as oil degradation, were significantly higher in the inorganic substrate, indicating that biodegradation of oil spills in organic substrates may require a longer time period. Time-released fertilizer also stimulated plant productivity and resulted in higher soil respiratory quotients, suggestive of greater microbial activity, particularly in aerated mesocosms. The amount of oil remaining after 18 months was lowest in aerated and fertilized mesocosms containing either P. hemitomon or S. lancifolia and a substrate of low organic matter content.     

Mechanisms of enrichment of the rarer elements in marine manganese nodules

The rare-earth distribution has been determined in five manganese nodules from a range of marine environments. Manganese nodules from Loch Fyne, Scotland, and the Gulf of Aden are characterized by a low absolute abundance of the rare-earth elements and a low Ce/La ratio compared with deep-sea nodules. This difference is interpreted in terms of the diagenetic remobilization of manganese in the high sedimentation regimes leading to the effective fractionation of manganese from the rare-earth elements and the resultant depletion of the rare earths in nodules from these environments. The mechanism of incorporation of the rare-earth elements into manganese nodules is thought to be either the direct adsorption of these elements from seawater or the scavenging of the elements by colloidal iron oxide prior to their incorporation into the authigenic phase of nodules. There appears to be no evidence for the surface transfer of these elements from inorganic detritus into the authigenic phase of nodules as suggested by previous authors. The distribution of U and Th in the nodules is controlled by factors similar to those controlling the rare-earth abundance in nodules. The higher U/Th ratios in nodules from Loch Fyne and the Gulf of Aden is considered to be due to the preferential reduction of UO₂(CO₃)₃^4? to some lower-valency uranium species such as U₃O₈ in nodules from less oxidizing environments.     

Topography and a magnetic analysis of an area south-east of the Azores (36°N, 23°W)

A detailed survey of a 1°×1°-square of seafloor 100 miles south-east of the Azores shows a strong correlation between directions of regional topographic and magnetic lineations. The area is dissected by the East Azores Fracture Zone at 36°55N, identified as the active Eurasian-African plate boundary, and by another large, non-active fracture zone at 36°10N. Both fracture zones strike 265° and are accompanied by large amplitude magnetic anomalies. The general strike in the area in between is 000°–015°. The skewing effect at this magnetic latitude is very sensitive to variations in strike of the magnetic contrasts. This effect was eliminated by a non-linear transformation which also gives the positions of magnetic contrasts. Some N-S contrasts were identified as sea floor spreading polarity contrasts (anomalies 31 and 32). Weak contrasts could be identified as topographic effects and gave a magnetization intensity of 5 A m^-1. The identified sea floor spreading anomalies to both sides of the fracture zone at 36°10N agree very well, also quantatively, with a three-dimensional model for the fracture zone anomalies. This model describes the non-linear anomalies as end effects of the magnetic layer which is divided in blocks of alternating polarity.     

Sand ridges on the inner Atlantic shelf of North America: Morphometric comparisons with Huthnance stability model

Sand ridge fields on the inner shelf of the Middle Atlantic Bight are generally thought to have formed in response to northeasterly storm flows as the shoreface underwent erosional retreat with postglacial sea-level rise. However, the hydrodynamic mechanism is poorly unerstood. Coastal boundary models see the ridges as responses of the seafloor to distortions in the flow induced by the coastal boundary. Stability models propose that an irregular initial topography will evolve toward an ordered array of bedforms in response to repeated flow events. The two classes of models are not mutually exclusive, nor are members within each class mutually exclusive. Results of measurements of ridge spacing on the inner Atlantic shelf of North America agree with the predictions of stability models.     

Anatomy of a shore face ridge system,False Cape,Virginia

The Middle Atlantic Shelf of North America is a broad sand plain, characterized by a subdued ridge and swale topography. Some ridges extend into or merge with the shore face.