Microbial biomass response to different quantities and sources of organic matter in Brazilian coastal sediments

This study investigates the benthic microbial responses to organic matter (OM) variations in quantity and sources in two shallow water bays (Fortaleza and Ubatuba Bays) on the SE coast of Brazil on six occasions during the year. The pelagic and benthic compartments of the bays were evaluated by: (i) nutrients and chlorophyll a (Chl a) in the water column; (ii) quantity and sources of OM in the sediment (Chl a, total organic carbon and total nitrogen and lipid biomarker composition); and (iii) microbial biomass in sediments as an indicator of active benthic response. Although there were changes in water‐column nutrients during the year, Chl a was fairly constant, suggesting a regular supply of microalgae‐derived OM to the sea bottom. Based on the composition of lipid biomarkers in sediments, OM sources were classified as mostly marine and with high contributions of labile (microalgae‐derived) OM. Labile OM composition varied from diatoms in the summer to phytoflagellates in the winter and tended to accumulate in areas protected by physical disturbances in one of the bays. Microbial biomass followed this trend and was 160% higher in protected than in exposed areas. This study suggests that the coupling between labile OM and benthic microbial biomass occurs primarily in protected areas, irrespective of the time of the year. Since meio‐ and macrofaunal assemblages depend upon secondary microbial production within the sediments, this coupling may have an important role for the benthic food‐web.     

Integrative taxonomic description of Plakina kanaky,a new polychromatic sponge species from New Caledonia (Porifera: Homoscleromorpha)

Four similar sponges of different colors, all unknown to science, were collected in submarine caves of New Caledonia. We aimed at determining whether the four chromotypes represented different species or phenotypic variations of a unique new species. We used an integrative taxonomic approach combining morphologic, molecular and metabolomic analyses. The main traits that define these specimens are a skeleton made of monolophose, trilophose and tetralophose calthrops only, high chemical diversity and a high abundance and diversity of prokaryotic symbionts. The symbiotic community includes two unique prokaryote morphotypes, which are described for the first time in Homoscleromorpha, and appeared to be vertically transmitted. Although several features slightly differ among chromotypes, the most parsimonious conclusion was to propose a single new species Plakina kanaky sp. nov. Our phylogenetic analysis indicated the paraphyly of the Plakina genus, with P. kanaky sp. nov. belonging to a clade that includes Plakina jani and Plakina trilopha. The present work demonstrates that integrative taxonomy should be used in order to revise the entire Plakinidae family and especially the non‐monophyletic genus Plakina.     

Seasonally and spatially referenced estimates of recreational shore-angling effort,catch composition,catch rates and total catch in the Goukamma Marine Protected Area,South Africa

A roving creel survey of the recreational shore fishery along the 16.4-km coastline in the Goukamma Marine Protected Area on the south coast of South Africa was conducted from 2009 to 2011. Some 838 patrols were stratified equally among months, areas and years, but intentionally biased towards weekends. Angler densities at Buffalo Bay and Groenvlei were 0.59 and 0.28 anglers km?1, respectively. Weekend densities were double to quadruple weekday densities and fishing during winter was more popular than during summer. Area, habitat and distance to access points explained variation in angler densities. Shannon–Wiener diversity in catches declined from 2.18 in an earlier (1993–2002) survey to 1.79. Although the order of species abundance in the catches remained largely unchanged, blacktail Diplodus capensis dominance increased to 57.3% by number, at the expense of galjoen Dichistius capensis. Habitat explained 27% of the variance in catch composition. The catch per unit effort (CPUE) for the top nine species ranged from 0.19 to 6.35 fish 100-h?1. The CPUE of all species, except spotted grunter Pomadasys commersonnii, declined. Blacktail and galjoen CPUE declined by 17% and 77%, respectively. The total catch estimate was 2 986 fish y?1. Transgressions of size limits were common. The results suggest that the fishery is overexploited and that catch rates are declining.     

El Niño teleconnections in CMIP5 models

Teleconnections associated with warm El Niño/southern oscillation (ENSO) events in 20 climate model intercomparison project 5 (CMIP5) models have been compared with reanalysis observations. Focus has been placed on compact time and space indices, which can be assigned a specific statistical confidence. Nearly all of the models have surface temperature, precipitation and 250 hPa geopotential height departures in the Tropics that are in good agreement with the observations. Most of the models also have realistic anomalies of Northern Hemisphere near-surface temperature, precipitation and 500 hPa geopotential height. Model skill for these variables is significantly related to the ability of a model to accurately simulate Tropical 250 hPa height departures. Additionally, most models have realistic temperature and precipitation anomalies over North America, which are linked to a model’s ability to simulate Tropical 250 hPa and Northern Hemisphere 500 hPa height departures. The skills of temperature and precipitation departures over the Northern Hemisphere and North America are associated with the ability to realistically simulate realistic ENSO frequency and length. Neither horizontal nor vertical resolution differences for either the model atmosphere or ocean are significantly related at the 95 % level to variations in El Niño simulation quality. Overall, recent versions of earlier models have improved in their ability to simulate El Niño teleconnections. For instance, the average model skills of temperature and precipitation for the Tropics, Northern Hemisphere and North America for 11 CMIP5 models are all larger than those for prior versions.     

Nighttime convection in the interior of a dense Douglas fir forest

Infrared radiative surface temperatures as observed over a dense Douglas fir forest during stable atmospheric conditions are analyzed. It is shown that the concept of a single surface temperature to describe both the thermal coupling and the radiative coupling between atmosphere and forest fails when longwave cooling is large and wind speeds are low. In such cases a decoupling of the radiative surface temperature from the air temperature aloft is observed. Conditions for decoupling are formulated in terms of an appropriate Richardson number. It is shown that a convective surface temperature comes into play that is coupled to the forest interior air temperature. Observed radiative surface temperature is then composed of this convective surface temperature and the aerodynamic surface temperature. Forest interior air temperature during nighttime is, in general, lower than air temperature above the canopy. A simple two-layer canopy model is used to explain this phenomenon in terms of the distribution of atmospheric sensible heat flux and storage heat flux over the two canopy layers.     

Characterisation of Soot Emitted by Domestic Heating,Aircraft and Cars Using Diesel or Biodiesel

The characterisation of aggregates, like soot, firstly requires the determination of the size distribution of the primary particles. The primary particle size of combustion generated aggregates depends upon the combustion environment and the formation conditions, such as temperature, pressure and fuel-to-air ratio, among others. Since the combustion characteristics are different in the different types of burners, the characterisation of primary particles may offer the possibility to distinguish soot from different sources. In this paper, we present the signature of the primary particles and the aggregates of soot emitted by cars using diesel or biodiesel, by domestic heating, and by aircraft exhausts, which can be considered as the major sources as derived from measurements on transmission electron micrographs. The size distributions of all aggregates types with different aerodynamic diameter were log-normal and quasi-monodisperse. The size distribution of the primary particles for soot emitted by different sources showed minor differences. However, a comparison between the diameter of the primary particles and those obtained using a standard method for carbon black revealed discrepancies. The median diameter of the primary particles was combined with the median number of primary particles in an aggregate to calculate the relative particle surface area available for adsorption. In a similar way, the relative specific surface area was determined. The surface area was measured using the Brunauer-Emmett-Teller (B.E.T.) nitrogen adsorption method and the relative surface area available for adsorption was calculated.     

Assessment of Indian summer monsoon simulation by Community Atmosphere Model (CAM3)

Seasonal prediction of Indian Summer Monsoon (ISM) has been attempted for the current year 2011 using Community Atmosphere Model (CAM) developed at the National Centre for Atmospheric Research (NCAR). First, 30?years of model climatology starting from 1981 to 2010 has been generated to capture the variability of ISM over the Indian region using 30 seasonal simulations. The simulated model climatology has been validated with different sets of observed climatology, and it was observed that the simulated climatological rainfall is affected by model bias. Subsequently, a bias correction procedure using the Tropical Rainfall Measuring Mission (TRMM) 3B43 rainfall has been proposed. The bias-corrected rainfall climatology shows both spatial and temporal variability of ISM satisfactorily. Further, four sets of 10-member ensemble simulations of ISM 2009 and 2010 have been performed in hindcast mode using observed sea surface temperature (SST) and persistence of April SST anomaly, and it has been found that the bias-corrected model rainfall captures the seasonal variability of ISM reasonably well with some discrepancies in these two contrasting monsoon years. With this positive background, the seasonal prediction of ISM 2011 has been carried out in forecast mode with the assumption of persistence of May SST anomaly from June through September 2011. The model assessment shows an 11% deficiency in All-India Rainfall (AIR) of ISM 2011. In particular, the monthly accumulated rains are predicted to be 101% (17.6?cm), 86% (24.3?cm), 83% (21.0?cm) and 95% (15.5?cm) of normal AIR for the months of June, July, August and September, respectively.