Isolation of 12 microsatellite markers following a pyrosequencing procedure and cross-priming in two invasive cryptic species, Alexandrium catenella (group IV) and A. tamarense (group III) (Dinophyceae)

Alexandrium catenella (group IV) and Alexandrium tamarense (group III) (Dinophyceae) are two cryptic invasive phytoplankton species belonging to the A. tamarense species complex. Their worldwide spread is favored by the human activities, transportation and climate change. In order to describe their diversity in the Mediterranean Sea and understand their settlements and maintenances in this area, new microsatellite markers were developed based on Thau lagoon (France) samples of A. catenella and A. tamarense strains. In this study twelve new microsatellite markers are proposed. Five of these microsatellite markers show amplifications on A. tamarense and ten on A. catenella. Three of these 12 microsatellite markers allowed amplifications on both cryptic species. Finally, the haplotypic diversity ranged from 0.000 to 0.791 and 0.000 to 0.942 for A. catenella and A. tamarense respectively.     

How Different Analysis and Interpolation Methods Affect the Accuracy of Ice Surface Elevation Changes Inferred from Satellite Altimetry

Satellite altimetry has been widely used to determine surface elevation changes in polar ice sheets. The original height measurements are irregularly distributed in space and time. Gridded surface elevation changes are commonly derived by repeat altimetry analysis (RAA) and subsequent spatial interpolation of height change estimates. This article assesses how methodological choices related to those two steps affect the accuracy of surface elevation changes, and how well this accuracy is represented by formal uncertainties. In a simulation environment resembling CryoSat-2 measurements acquired over a region in northeast Greenland between December 2010 and January 2014, different local topography modeling approaches and different cell sizes for RAA, and four interpolation approaches are tested. Among the simulated cases, the choice of either favorable or unfavorable RAA affects the accuracy of results by about a factor of 6, and the different accuracy levels are propagated into the results of interpolation. For RAA, correcting local topography by an external digital elevation model (DEM) is best, if a very precise DEM is available, which is not always the case. Yet the best DEM-independent local topography correction (nine-parameter model within a 3,000 m diameter cell) is comparable to the use of a perfect DEM, which exactly represents the ice sheet topography, on the same cell size. Interpolation by heterogeneous measurement-error-filtered kriging is significantly more accurate (on the order of 50% error reduction) than interpolation methods, which do not account for heterogeneous errors.

     

Geomechanics of hazardous landslides

A catalogue of possible landslide initial failure mechanisms, taking into account the geological setting and the geometry of the slope, the joint structure, the habitus of the rock blocks, as well as the mechanical behaviour of the rocks and of the rock mass （deformation and strength parameters）, is presented. Its aim is to give geologists as well as engineers the opportunity to compare phenomena in the field and phenomena belonging to particular mechanisms and to find the mechanism occurring. The presented catalogue of initial landslide mechanisms only comprises the mechanisms having a clearly defined mechanical model that can be divided into empirical relations and into mechanical models, as well as an overview of run out models, which can be divided into empirical relations and into mechanical models.     

The Role of Fluvial and Glacial Erosion in Landscape Evolution: The Ben Ohau Range,New Zealand

A morphometric comparison of valleys has been made for the Ben Ohau Range in the central Southern Alps of New Zealand. The range is undergoing rapid tectonic transport and uplift. The humid north of the range is a glacial trough-and-arête landscape, with a temperate glacial climate. The dry south has rounded divides and plateau remnants dissected by fluvial valleys. Assuming that space–time substitution allows today's spatial valley-form transition to represent evolutionary stages in valley development, the tectonic history allows time constraints to be placed on the rate of transition to an alpine glacial landscape. Morphometric change has been quantified using hypsometric curves, and distance–elevation plots of cirque and valley-floor altitudes. Ancestral fluvial valleys have less concave long profiles but are stepped at altitude owing to the presence of high-level cirques and remnant plateau surfaces, and possess a low proportion of land area at low elevation. Increasing glacial influence is manifest as smoother, more deeply concave long profiles and U-shaped cross-profiles associated with a higher proportion of the land area at lower elevation. The full morphological transition has involved up to 2.4 km of vertical denudation over the 4 Ma lifetime of the mountain range, of which 80 per cent would have occurred by preglacial fluvial erosion. Combining the trajectory of tectonic transport with reconstructed glaciation limits and climatic history, it is indicated that about 200 ka of temperate glacial erosion produces recognizable trough-and areête topography. Mean and modal relief increase where glacial activity is confined to cirques, but decrease when trough incision by ice becomes established as a dominant process in the landscape. © 1997 by John Wiley & Sons, Ltd.     

The fusion crust of the Winchcombe meteorite: A preserved record of atmospheric entry processes

Fusion crusts form during the atmospheric entry heating of meteorites and preserve a record of the conditions that occurred during deceleration in the atmosphere. The fusion crust of the Winchcombe meteorite closely resembles that of other stony meteorites, and in particular CM2 chondrites, since it is dominated by olivine phenocrysts set in a glassy mesostasis with magnetite, and is highly vesicular. Dehydration cracks are unusually abundant in Winchcombe. Failure of this weak layer is an additional ablation mechanism to produce large numbers of particles during deceleration, consistent with the observation of pulses of plasma in videos of the Winchcombe fireball. Calving events might provide an observable phenomenon related to meteorites that are particularly susceptible to dehydration. Oscillatory zoning is observed within olivine phenocrysts in the fusion crust, in contrast to other meteorites, perhaps owing to temperature fluctuations resulting from calving events. Magnetite monolayers are found in the crust, and have also not been previously reported, and form discontinuous strata. These features grade into magnetite rims formed on the external surface of the crust and suggest the trapping of surface magnetite by collapse of melt. Magnetite monolayers may be a feature of meteorites that undergo significant degassing. Silicate warts with dendritic textures were observed and are suggested to be droplets ablated from another stone in the shower. They, therefore, represent the first evidence for intershower transfer of ablation materials and are consistent with the other evidence in the Winchcombe meteorite for unusually intense gas loss and ablation, despite its low entry velocity.     

The earliest stage of Izu rear‐arc volcanism revealed by drilling at Site U1437, International Ocean Discovery Program Expedition 350

The International Ocean Discovery Program Expedition 350 drilled between two Izu rear‐arc seamount chains at Site U1437 and recovered the first complete succession of rear‐arc rocks. The drilling reached 1806.5 m below seafloor. In situ hyaloclastites, which had erupted before the rear‐arc seamounts came into existence at this site, were recovered in the deepest part of the hole (～15–16 Ma). Here it is found that the composition of the oldest rocks recovered does not have rear‐arc seamount chain geochemical signatures, but instead shows affinities with volcanic front or some of the extensional zone basalts between the present volcanic front and the rear‐arc seamount chains. It is suggested that following the opening of the Shikoku back‐arc Basin, Site U1437 was a volcanic front or a rifting zone just behind the volcanic front, and was followed at ~ 9 Ma by the start of rear‐arc seamount chains volcanism. This geochemical change records variations in the subduction components with time, which might have followed eastward moving of hot fingers in the mantle wedge and deepening of the subducting slab below Site U1437 after the cessation of Shikoku back‐arc Basin opening.     

An Open,Object-Based Framework for Generating Anisotropy in Sedimentary Subsurface Models

The spatial distribution of hydraulic properties in the subsurface controls groundwater flow and solute transport. However, many approaches to modeling these distributions do not produce geologically realistic results and/or do not model the anisotropy of hydraulic conductivity caused by bedding structures in sedimentary deposits. We have developed a flexible object-based package for simulating hydraulic properties in the subsurface—the Hydrogeological Virtual Realities (HyVR) simulation package. This implements a hierarchical modeling framework that takes into account geological rules about stratigraphic bounding surfaces and the geometry of specific sedimentary structures to generate realistic aquifer models, including full hydraulic-conductivity tensors. The HyVR simulation package can create outputs suitable for standard groundwater modeling tools (e.g., MODFLOW), is written in Python, an open-source programming language, and is openly available at an online repository. This paper presents an overview of the underlying modeling principles and computational methods, as well as an example simulation based on the Macrodispersion Experiment site in Columbus, Mississippi. Our simulation package can currently simulate porous media that mimic geological conceptual models in fluvial depositional environments, and that include fine-scale heterogeneity in distributed hydraulic parameter fields. The simulation results allow qualitative geological conceptual models to be converted into digital subsurface models that can be used in quantitative numerical flow-and-transport simulations, with the aim of improving our understanding of the influence of geological realism on groundwater flow and solute transport.     

What controls the extreme flow through the Kerama Gap: a global HYbrid Coordinate Ocean Model reanalysis point of view

Ocean Dynamics - The temporal variability of volume transport from the North Pacific Ocean to the East China Sea (ECS) through the Kerama Gap (between Okinawa Island and Miyakojima Island—a...     

The Dual-Domain Porosity Apparatus: Characterizing Dual Porosity at the Sediment/Water Interface

The characterization of pore-space connectivity in porous media at the sediment/water interface is critical in understanding contaminant transport and reactive biogeochemical processes in zones of groundwater and surface-water exchange. Previous in situ studies of dual-domain (i.e., mobile/less-mobile porosity) systems have been limited to solute tracer injections at scales of meters to hundreds of meters and subsequent numerical model parameterization using fluid concentration histories. Pairing fine-scale (e.g., sub-meter) geoelectrical measurements with fluid tracer data over time alleviates dependence on flowpath-scale experiments, enabling spatially targeted characterization of shallow sediment/water interface media where biogeochemical reactivity is often high. The Dual-Domain Porosity Apparatus is a field-tested device capable of variable rate-controlled downward flow experiments. The Dual-Domain Porosity Apparatus facilitates inference of dual-domain parameters, i.e., mobile/less-mobile exchange rate coefficient and the ratio of less mobile to mobile porosity. The Dual-Domain Porosity Apparatus experimental procedure uses water electrical conductivity as a conservative tracer of differential loading and flushing of pore spaces within the region of measurement. Variable injection rates permit the direct quantification of the flow-dependence of dual-domain parameters, which has been theorized for decades but remains challenging to assess using existing experimental methodologies.