Characterizing Spatial Databases via their Derivation: A Complement to Content Ontologies

Developing an ontology that succinctly describes the contents of a spatial database is a very difficult undertaking. Yet most current efforts to develop spatial ontologies remain focused on describing content. Ontologies describing other aspects of spatial databases may prove to be much easier to develop and nearly as useful as content ontologies, and yet these alternative ontologies have received little attention from the research community. This paper explores one such alternative, specifically, an ontology that describes how a spatial database may have been derived. Derivation ontologies are shown to be highly complementary to content ontologies, and in some cases can perform nearly identical tasks. It is also shown that derivation ontologies are much more straightforward to develop than are content ontologies. Finally, we present a genetic programming (GP)‐based approach to automatically developing derivation ontologies for existing databases. It is concluded that while derivation ontologies cannot replace content ontologies, they are a useful and practical complement that offer their own unique set of strengths to the problem of semantically characterizing spatial data.     

Geodetic aspects of seismological phenomena

Seismology is related to many problems of geodesy. The energy production of our planet is rather close to energy consumption of the Earth so that the energy balance can be disturbed significantly by minor processes acting on global scale. From this point of view the effect of tidal triggering of earthquakes is discussed by the study of tidal stress tensor components expressed in spherical system of coordinates. Tidal friction influences through the despinning of the axial rotation the geometrical flattening. This flattening variation causes stresses along the longitude and this phenomenon is closely related to the seismic energy release. Until now there is no unambiguous success to relate changes of the Earth orientation parameters with seismicity. Present-day accuracy of the length of day variations is not sufficient yet to detect spin variation generated by the greatest earthquakes. The polar motion is probably more sensitive to earthquakes and then there is a chance to detect the polar displacements generated by seismic events. In the last section of the present contribution, the strain rates derived from the static seismic moments and from space geodetic observations are compared. Future geodetic strain rate data will be useful in earthquake prediction.     

Monitoring the Removal of Phosphate from Ground Water Discharging through a Pond-Bottom Permeable Reactive Barrier

Installation of a permeable reactive barrier to intercept a phosphate (PO₄) plume where it discharges to a pond provided an opportunity to develop and test methods for monitoring the barrier's performance in the shallow pond-bottom sediments. The barrier is composed of zero-valent-iron mixed with the native sediments to a 0.6-m depth over a 1100-m² area. Permanent suction, diffusion, and seepage samplers were installed to monitor PO₄ and other chemical species along vertical transects through the barrier and horizontal transects below and near the top of the barrier. Analysis of pore water sampled at about 3-cm vertical intervals by using multilevel diffusion and suction samplers indicated steep decreases in PO₄ concentrations in ground water flowing upward through the barrier. Samples from vertically aligned pairs of horizontal multiport suction samplers also indicated substantial decreases in PO₄ concentrations and lateral shifts in the plume's discharge area as a result of varying pond stage. Measurements from Lee-style seepage meters indicated substantially decreased PO₄ concentrations in discharging ground water in the treated area; temporal trends in water flux were related to pond stage. The advantages and limitations of each sampling device are described. Preliminary analysis of the first 2 years of data indicates that the barrier reduced PO₄ flux by as much as 95%.     

Annual budget of benthic production in Mont Saint-Michel Bay considering cloudiness,microphytobenthos migration,and variability of respiration rates with tidal conditions

In order to provide an accurate annual rate of net benthic community production, community photosynthetic response to incident irradiance and respiration were measured at different times of the year, at mid-tide level on the muddiest part of the Mont Saint-Michel Bay. As the water turbidity prevented any photosynthesis by the microphytobenthos during immersion periods, primary production was measured only during emersion periods. In contrast respiration was expected to vary according to the tidal cycle and was measured during both emersion and immersion periods. Primary production and respiration rates under emersion were assessed using in situ infra-red gas analysis of CO₂ exchange measured in a benthic chamber. Respiration rates under immersion were assessed through total CO₂ concentration variations in incubated cores.     

A novel experimental procedure to investigate the biodegradation of NAPL under unsaturated conditions

Soils need to be thoroughly investigated regarding their potential for the natural attenuation of non-aqueous phase liquids (NAPL). Laboratory investigations truly representative of degradation processes in field conditions are difficult to implement for porous media partially saturated with water, NAPL and air. We propose an innovative protocol to investigate degradation processes under steady-state vadose zone conditions. Experiments are carried out in glass columns filled with a sand and, as bacteria source, a soil from a diesel-fuel-polluted site. Water and NAPL (n-hexadecane diluted in heptamethylnonane (HMN)) are added to the porous medium in a two-step procedure using ceramic membranes placed at the bottom of the column. This procedure results, for appropriate experimental conditions, in a uniform distribution of the two fluids (water and NAPL) throughout the column. In a biodegradation experiment non-biodegradable HMN is used to provide NAPL mass, while keeping biodegradable n-hexadecane small enough to monitor its rapid degradation. Biodegradation is followed as a function of time by measuring oxygen consumption, using a respirometer. Degradative activity is controlled by diffusive transfers in the porous network, of oxygen from the gas phase to the water phase and of n-hexadecane from the NAPL phase to the water phase.     

Consequences of spring phytodetritus sedimentation on the benthic compartment along a depth gradient in the Eastern English Channel

Phaeocystis blooms are of major importance in the Eastern English Channel, where they significantly contribute to spring organic matter input with chlorophyll concentrations commonly higher than 30 microgl(-1) in the water column. Post-bloom deposition of Phaeocystis derived mucilaginous compounds has been shown to have a major importance on benthic intertidal systems, but resulting mineralization processes and consequences on the macrobenthic compartment remain poorly documented in subtidal areas. In this frame, a study was performed along the French coast of the English Channel to quantify mineralization processes, as well as potential consequences on subtidal sediments, especially their geochemistry and associated macrofaunal communities. Seven stations were studied along a depth gradient during four cruises: before (March), during (April, May) and after (June) the spring bloom. Sediment characteristics and organic carbon content were described, as well as sediment-water fluxes of oxygen and ammonium. Macrofaunal characteristics were also analyzed. Stations were chosen as representative of the various benthic communities present in the area, which are directly linked to the granulometric characteristics of the sediments. To account for the general functioning of the water column, characterized by a coastal flow where higher concentrations of Phaeocystis are generally recorded, similar communities were sampled inshore and offshore, when possible: (i) the Abra alba community located only close to the coast, (ii) the Ophelia borealis community located inshore and offshore, and (iii) the Amphioxus lanceolatus community located inshore and offshore. Generally, low exchange rates of oxygen and ammonium were measured (respectively, in the range 50-150 micromol O2 m(-2)h(-1) and -25 to 35 micromol NH4+ m(-2)h(-1)) between the water column and the muddy-sand to coarse sand permeable sediments, as a consequence of the low organic carbon content due to the high hydrodynamic forcing. As a consequence of organic matter accumulation in surficial sediments probably resulting from Phaeocystis post-bloom deposition, an increase of sediment oxygen demand and ammonium release was clearly evidenced up to 660 micromol O2 m(-2)h(-1) and 205 micromol NH4+ m(-2)h(-1) in May, only in stations located close to the coast (<8 kms), in the A. alba community. Despite those significant biogeochemical changes in surficial sediments, no significant consequence was pointed out on macrofauna, neither in the O. borealis and A. lanceolatus communities, nor in the coastal A. alba community. Most of the temporal variations recorded might be attributed to the common spring population dynamics, but this study highlights the potential use of geochemical parameters as a forewarning signal of benthic disequilibrium.     

Abundance of fin whales (Balaenoptera physalus) in the north-western Mediterranean Sea,using photo-identification and microsatellite genotyping

The Mediterranean fin whale population, Balaenoptera physalus, is resident, with almost no exchanges with the Atlantic population. The entire population was estimated at 1300 or 13,300 individuals by a recent project depending on the platform used. This disparity shows the importance of long-term monitoring with a unique protocol of survey. Capture-recapture approaches using dorsal photographs and genetic identity collections over a 10 years period were used to estimate the abundance of the north-western Mediterranean fin whale. We identified 332 individuals using photographs and 470 using genotypes, with a total of 546 individuals identified between 2008 and 2019, when some whales were double-marked. The inter-annual percentage of recapture varied between 15% and 17% respectively for genotypes and photographs methods. Using Cormack-Jolly-Seber models, the abundance of fin whales in the north-western Mediterranean is estimated at 1295 individuals (95% CI: 1116–1474) with a survival probability of 0.945 (95% CI: 0.690–0.993) from genotypes. Abundance estimates from combined collections (photographs and genotypes) and corrected photograph estimates were similar to the genetic ones. Future studies might prioritize the genetic approach which is the least biased and with a narrower confidence interval. The genetic abundance estimates show relative stability over time, when compared to 1990 estimates, and should be included in future conservation actions.     

Variations in the response of the dune coast of northern France to major storms as a function of available beach sediment volume

A series of airborne topographic LiDAR data were obtained from May 2008 to January 2014 over two coastal sites of northern France (Bay of Wissant and east of Dunkirk). These data were used with wind and tide gauge measurements to assess the impacts of storms on beaches and coastal dunes, and particularly of the series of major storms that hit western Europe during the fall and early winter of 2013. Our results show a high variability in shoreline response from one site to the other, but also within each coastal site. Coastal dune erosion and shoreline retreat occurred at both sites, particularly on the coast of the Bay of Wissant where shoreline retreat up to about 40 m was measured. However, stability or even shoreline advance were also observed despite the occurrence of an extreme water level with a return period >100 years during the storm Xaver in early December 2013. Comparison of shoreline change with variations of coastal dune and upper beach volumes revealed only weak relationships. Our results nevertheless showed that shoreline behavior seems to strongly depend on the initial sediment volume on the upper beach before the occurrence of the storms. According to our measurements, an upper beach volume of about 30 m³ m^?1 between the dune toe and the mean high water level is sufficient at these sites to protect the coastal dunes from storm waves associated with high water levels with return periods >10 years. The identification of such thresholds in terms of upper beach width or sediment volume may represent valuable information for improving the management of shoreline change by providing an estimate of the minimum quantity of sand on the upper beach necessary to ensure shoreline stability in this region. Copyright © 2016 John Wiley & Sons, Ltd.     

Speleothems in a north Cuban cave register sea‐level changes and Pleistocene uplift rates

A flight of marine terraces along the Cuban coast records Quaternary sea‐level highstands and a general slowly uplifting trend during the Pleistocene. U/Th dating of these limestone terraces is difficult because fossil reef corals have been affected by open system conditions. Terrace ages are thus often based on geological and geomorphological observations. In contrast, the minimum age of the terraces can be constrained by dating speleothems from coastal mixing (flank margin) caves formed during past sea‐level highstands and carving the marine limestones. Speleothems in Santa Catalina Cave have ages >360 ka and show various cycles of subaerial–subaqueous corrosion and speleothem growth. This suggests that the cave was carved during the MIS 11 sea‐level highstand or earlier. Some stalagmites grew during MIS 11 through MIS 8 and were submerged twice, once at the end of MIS 11 and then during MIS 9. Phreatic overgrowths (POS) covering the speleothems suggest anchialine conditions in the cave during MIS 5e. Their altitude at 16 m above present sea level indicates a late Pleistocene uplift rate of <0.1 mm/ka, but modelling also shows uplift to have been insignificant over a long timespan during the middle Pleistocene since the cave was carved. Our study shows that some flank margin caves in the region of Matanzas are older than commonly believed (i.e. MIS 11 rather than MIS 5). These caves not only can be preserved but are good markers of interglacial sea‐level highstands, more reliable than marine abrasion surfaces. Copyright © 2018 John Wiley & Sons, Ltd.     

Pattern of vertical velocity in the Lofoten vortex (the Norwegian Sea)

Mean radial distributions of various dynamic characteristics of the permanently existing anticyclonic Lofoten vortex (LV) in the Norwegian Sea are obtained from an eddy-permitting regional hydrodynamic MIT general circulation model. It is shown that the model adequately reproduces the observed 3D thermohaline and dynamic structure of the vortex. The obtained radial distribution of the mean vertical velocity is found to form a complex structure: with the upward fluxes along the axis in and above the anticyclonically rotating LV core, compensated by the downward fluxes in the vortex skirt. These vertical motions maintain the vortex potential energy anomaly against dissipation. This secondary circulation is generated by the centrifugal force and, to a lesser extent, by the horizontal dispersion of the vortex energy, both intensified towards the sea surface. Below the vortex core, the maximum downward vertical velocity converges towards the vortex axis with depth. At these depth levels, the secondary circulation is forced by Ekman divergence in the bottom mixed layer. The theory of columnar vortices with helical structure, applied to the LV, relate the radial profiles of the vertical velocity with those of the horizontal circulation. The theoretically predicted the radial patterns of the mean vertical velocity in the LV were close to those, obtained from the primitive equation ocean model, when approximating the radial patterns of the azimuthal velocity with the Rayleigh profile.