Measures of Parameter Uncertainty in Geostatistical Estimation and Geostatistical Optimal Design

Studies of site exploration, data assimilation, or geostatistical inversion measure parameter uncertainty in order to assess the optimality of a suggested scheme. This study reviews and discusses measures for parameter uncertainty in spatial estimation. Most measures originate from alphabetic criteria in optimal design and were transferred to geostatistical estimation. Further rather intuitive measures can be found in the geostatistical literature, and some new measures will be suggested in this study. It is shown how these measures relate to the optimality alphabet and to relative entropy. Issues of physical and statistical significance are addressed whenever they arise. Computational feasibility and efficient ways to evaluate the above measures are discussed in this paper, and an illustrative synthetic case study is provided. A major conclusion is that the mean estimation variance and the averaged conditional integral scale are a powerful duo for characterizing conditional parameter uncertainty, with direct correspondence to the well-understood optimality alphabet. This study is based on cokriging generalized to uncertain mean and trends because it is the most general representative of linear spatial estimation within the Bayesian framework. Generalization to kriging and quasi-linear schemes is straightforward. Options for application to non-Gaussian and non-linear problems are discussed.     

Formation Mechanism of Mud Bank Along the Southwest Coast of India

Mud bank formation during the southwest monsoon along the southwest coast of India remains an enigma to the researchers and coastal community in spite of several earlier studies. The present study attempts to unravel the mystery through a high-frequency, season-long time-series observation at Alappuzha, located at the southern part of the west coast of India, a region of frequent occurrence of mud bank. Using 7-month-long weekly time-series observation, we identified strong winds and high waves associated with onset of the southwest monsoon and subsequent three episodic atmospheric low-pressure events (LPEs).With the help of in situ time-series data, we show that the strong winds and high waves associated with southwest monsoon pre-conditions the near shore bottom sediment to bring it into suspension. The high amplitude waves associated with the southwest monsoon, while propagating from the deep water to shallow water region, interact with the bottom initiating bottom-sediment movement and its suspension due to wave refraction and shoaling. The sporadic occurrence of the atmospheric LPEs enhances the process of suspension of bottom sediment in the near shore region leading to the formation of fluid mud. Simulations with a cohesive sediment transport model yielded realistic estimates of sediment transport, in the presence of an onshore current, a pre-requisite for transporting the fluid mud toward the coast. The prevailing onshore upwelling current during the southwest monsoon provides the favorable pre-requisite conditions for transporting the fluid mud through depression channel network towards the coast. Once sufficient quantity and thickness of fluid mud is accumulated in the near shore region, it acts as a wave damper for subsequent high monsoon waves, as indicated by the time-series wave data, leading to the formation of tranquil mud bank region. Depression channel networks extending from the shelf to the coast off Alappuzha, Kochi, Ponnani, Beypore, and Ullal were found in the bathymetric charts, thus explaining why mud banks occur only at few locations in spite of the prevalence of similar monsoon conditions.     

Analysis of mutations in the p53 tumor suppressor gene and Ki- and Ha-ras proto-oncogenes in hepatic tumors of European flounder (Platichthys flesus).

DNA from five tumors, three other-injured livers and two normal liver tissue samples from the European flounder were analyzed for mutations in exons 5-8 of the tumor suppressor gene p53 and at codons 12, 13 and 61 of Ha- and Ki-ras proto-oncogenes. No tumor-specific mutations were identified by direct sequencing and single-strand conformation polymorphism of these genes. A number of silent polymorphisms were noted in p53. In addition to a need for more extensive analyses of flounder liver tumor samples for ras or p53 mutations, other cancer-related genes should be investigated.     

Expression of putative zinc-finger protein lcn61 gene in lymphocystis disease virus China （LCDV-cn） genome

An open reading frame (lcn61) of lymphocystis disease virus China (LCDV-cn), probably responsible for encoding putative zinc-finger proteins was amplified and inserted into pET24a (+) vector. Then it expressed in E. coli BL21 (DE3), and His-tag fusion protein of high yield was obtained. It was found that the fusion protein existed in E. coli mainly as inclusion bodies. The bioinformatics analysis indicates that LCN61 is C2H2 type zinc-finger protein containing four C2H2 zinc-finger motifs. This work provides a theory for functional research of lcn61 gene. Supported by High Technology Research and Development Program of China (863 Program, No. 2006AA100309)     

Alteration processes in the CV chondrite parent body based on analysis of NWA 2086 meteorite

Analysis of the NWA 2086 CV3 chondrite showed a matrix/chondrule ratio of 52%, similar to Bali, Mokoia, and Grosanaja. Nearly twice as many chondrule fragments as intact ones demonstrate that an early fragmentation phase occurred prior to final accretion. After this event, no substantial mechanical change or redeposition is evident. Rims with double‐layered structures were identified around some chondrules, which, in at least one case, is attributed to an accretionary origin. The rim's outer parts with a diffuse appearance were formed by in situ chemical alteration. During this later process, Mg content decreased, Fe content increased, and olivine composition was homogenized, producing a rim composition close to that of the matrix. This alteration occasionally happened along fractures and at confined locations, and was probably produced by fluid interactions. Iron oxides are the best candidate for a small grain‐sized alteration product; however, technical limitations in the available equipment did not allow exact phase identification. These results suggest that NWA 2086 came from a location (possible more deeply buried) in the CV parent body than Mokoia or Bali, and suffered less impact effects—although there is no evidence of sustained thermal alteration. This meteorite may represent a sample of the CV parent asteroid interior and provide a useful basis for comparison with other CV meteorites in the future.     

CLIMAP SSTs re-revisited

Since the 1976 publication of the CLIMAP ice age sea surface temperature (SST) reconstruction showing a 1–2 ^∘C tropical cooling a substantial debate has arisen as to whether tropical SSTs may instead have been 4–5^∘ colder than present. Herein I review the arguments for large SST variations and question a number of key findings, particularly the validity of ice-age coral SST estimates and “down-projecting” tropical snowline changes to the surface. GCM results indicate that an intermediate solution requiring ∼2.5 ^∘C warm pool cooling is consistent with most quantitative low elevation surface land data and is small enough to allow the persistence of tropical biota in the ocean during glacial times. The proposal reduces estimated ice-age climate sensitivity (for a doubling of CO₂) from a “high-end” sensitivity of about 4.5 ^∘C (for a 5–6 ^∘C tropical cooling) to a “mid-range” sensitivity of about 3.0 ^∘C for a 2.5 ^∘C warm-pool decrease. Received: 28 July 1999 /Accepted: 12 August 1999     

Phytoplankton diversity and chlorophyll-A in a polluted estuary

The quantity of phytoplankton in Newark Bay, New Jersey as indicated by chlorophyll-a content of the water, is low in the winter and early spring, and fluctuates greatly during the spring and summer. Chlorophyll-a concentrations are generally less than 20 μg/l until April. Between April and August, three phytoplankton blooms were indicated by chlorophyll-a concentrations as high as 81.4 μg/l. Net phytoplankton diversity values indicated generally eutrophic conditions; however, there was no significant correlation between diversity and chlorophyll-a concentrations. A role of nannoplankton in blooms is indicated.     

Models of travel demand with endogenous preference change and heterogeneous agents

In the literatures of regional science, urban economics, and urban development planning, a working assumption is that individuals respond to incentives and regulations, given their preferences. Models for planning and policy analyses are used to consider what might occur if the incentives or regulations were different. In these models, however, preferences are usually assumed to be given and stable, and agents are usually assumed to be homogeneous. This paper focuses on the implications of making preferences in models of policy implementation endogenously determined and time varying heterogeneous agents. We consider first the recent literature on intertemporal choice and preference change, which cuts across many disciplines, and more briefly the literature on norm-regarding behavior. We then elaborate a simple model of transportation demand—from a static to a dynamic orientation, from fixed and exogenously given preferences of strictly self-regarding agents to endogenously determined and policy-induced preferences of heterogeneous agents—and illustrate its characteristics with simple numerical examples.     

Anthropogenic-induced changes in twenty-first century summertime hydroclimatology of the Northeastern US

Potential changes in summertime hydroclimatology over the northeastern (NE) region of the USA induced by increases in greenhouse gas (GHG) concentrations are investigated using a state-of-the-art regional climate modeling system. Results for a higher emissions scenario illustrate changes that may occur if dependence on fossil fuels continues over the coming century. Summertime precipitation is projected to decrease across much of the central NE, but increase over the southernmost and northernmost portions of the domain. Evaporation is expected to increase across the entire domain. The balance between these two results in a decrease in soil moisture content across most of the domain (by approximately 10 mm) and an increase in the summertime soil-moisture depletion rate (by approximately 10 mm/month). At the same time, an increase in both atmospheric near-surface specific and saturation specific humidity is projected, resulting in an increase in relative humidity across the southern portion of the domain, with slight decreases over the northern portion. Combined with an average increase in summer temperatures of 3.5°C, the projected increase in relative humidity results in a marked increase in the average daily maximum heat index for the region on the order of 3.9°C, as well as a 350–400% increase in the number of days with heat index values exceeding 32.2°C (90°F)—the level of “extreme caution”. Taken together, these high-resolution, dynamically-generated projections confirm the potential for significant summertime climate change impacts on the NE over the coming century as suggested by previous studies.