Phylogeny and phylogeography of the land hermit crab Coenobita purpureus (Decapoda: Anomura: Coenobitidae) in the Northwestern Pacific Region

Hermit crabs of the family Coenobitidae comprise the land hermit crabs, with 16 Coenobita species, and the coconut crab Birgus latro. They are terrestrial but spend their marine life as planktonic larvae. Some coenobitid crabs are widely distributed in the Indo‐West Pacific region, and some species occupy narrower ranges. To improve our knowledge of coenobitid crab speciation and geographical distribution patterns, we examined the phylogenetic relationship between Coenobita purpureus, which has a narrow distribution in the Northwestern Pacific, and its more widely distributed coenobitids including B. latro, Coenobita brevimanus, Coenobita cavipes, Coenobita perlatus, Coenobita rugosus and Coenobita violascens based on the mtDNA cytochrome c oxidase subunit I (COI) and 16S rDNA genes. We also assessed the phylogeography of Co. purpureus populations based on the COI gene. Our phylogenetic and phylogeographical analyses revealed that (i) Co. purpureus clustered with Co. rugosus and (ii) the Co. purpureus population in the Ogasawara Islands was genetically distinct from those in other regions, which showed genetic panmixia. It has been hypothesized that Co. purpureus evolved in the isolated landmasses of the Ryukyu region during the Pliocene, and that its population expanded and colonized the Ogasawara Islands in the late Pleistocene. Further phylogeographical studies on Coenobita species with relatively narrow distributions coupled with characterization of their phylogenetic relationships with widely distributed congeners will advance our knowledge of the speciation and geographical distribution history of coenobitid crabs.     

Low salinity residual ballast discharge and exotic species introductions to the North American Great Lakes

Exotic species introductions to the North American Great Lakes have continued even though ballast water management strategies were implemented in the early 1990s. Overseas vessels that arrive with little or no exchangeable ballast on board have been suspected to be an important source for discharging low salinity ballast containing low salinity tolerant organisms in this region. Residual ballast averaged 18.1+/-13.4 per thousand salinity among 62 samples taken primarily from bottom tanks on 26 vessels that entered the Great Lakes in 1999 and 2000. Sampling of 2-4 tanks each on nine vessels indicated all carried at least one tank of residual ballast of 相似文献   

A 10-Year Study on Techniques for Vegetation Restoration in a Desertified Salt Lake Area

Vegetation restoration is one of the most common and effective ways to combat desertification and prevent adjacent areas from sand encroachment in many of the desertified regions of the world. However, vegetation restoration in desertified regions is very difficult because of low rainfall, the mobile ground surface, and cost. An effective, low-cost method of afforestation is urgently required. To determine such a method, a 10-year study was carried out in the Jilantai Salt Lake area. Five different afforestation areas were established: a ‘comparison area,’ a ‘land enclosure area,’ a ‘land enclosure + irrigation area,’ a ‘leveled-afforestation area’ (the dune areas were leveled and then planted with seedlings with added irrigation), and a ‘protected afforestation area’ (the dune areas were planted with seedlings, and the surviving natural vegetation was protected as much as possible). Vegetation-related parameters (survival rate, height, trunk diameter, coverage, canopy size, and density) and environment-related factors (relative humidity, wind velocity, and amount of sand encroachment) were measured by standard methods. Results show that the protected afforestation method had the following advantages: (1) the survival rate was higher for seedlings planted in the protected afforestation area than in the leveled afforestation area; (2) vigor (height, trunk diameter, coverage, and canopy size) was better in seedlings planted in the protected afforestation area than in the leveled afforestation area, especially in the beginning period of revegetation; (3) coverage (of individual species, of all planted vegetation, and of all vegetation) was larger in the protected afforestation area than in the leveled afforestation area; (4) density of naturally germinated plant species was higher in the protected afforestation area than in the other areas, showing that the protected afforestation method provided a suitable growing environment not only for planted species but also for naturally growing species; (5) in the protected vegetation area, relative humidity of air increased and wind velocity was greatly reduced; (6) after the establishment of vegetation by the protected afforestation method, sand encroachment into the salt lake area was significantly reduced. These results suggest that protected afforestation is an effective method of vegetation rehabilitation that has the potential not only to be applied to arid lands in China but also to desertified areas throughout the world; (7) cost-effective calculation shows that the leveled afforestation area costs much more than other areas.     

Geochemical Cycles of Bio-essential Elements on the Early Earth and Their Relationships to Origin of Life

Abstract: The bio-essential elements are demanded for the metabolic action of all living organisms. These elements are continuously supplied to biosphere through the elemental cycle on the surface Earth. The geochemical cycle of bio-essential elements was most likely different in the pre-biotic era (ca. 4.4 to 4.0 Ga) compared to the modern Earth. The difference was probably made by the absence of continents and biological mediation in the pre-biotic environments. Geochemical cycle models of bio-essential elements (P, B and Mo) on the pre-biotic Earth are proposed in this study, and these models are examined using available geochemical data.
The input flux of phosphorous in pre-biotic oceans was probably dominated by submarine hydrothermal activities associated with carbonatized oceanic crusts. Such input flux by submarine hydrothermal activities is not known in the present-day oceans, and probably a unique flux in the pre-biotic oceans. Boron chemistry of pre-biotic oceans was also controlled by submarine hydrothermal input flux. The Mo exchange between the pre-biotic ocean and lithosphere may have restricted only at the submarine hydrothermal areas. These suggest that the submarine hydrothermal discharging areas were only locations to obtain bio-essential elements for the earliest life. This model is consistent with the previously proposed model for hydrothermal origin of life.     

Roles of vertical turbulent mixing in the ocean response to Typhoon Rex (1998)

How the role of vertical turbulent mixing (VTM) in sea surface cooling (SSC) varies with the moving speed of a tropical cyclone was examined for Typhoon Rex (1998) by using the Meteorological Research Institute Community Ocean Model (MRI.COM). The MRI.COM well reproduced TRMM/TMI three-day mean sea surface temperature (SST) fields along Rex’s track. During the fast-moving phase of Rex, SSC simulated by the MRI.COM was caused by shear-induced VTM on the right side of the track. During the slowly-moving phase, on the other hand, the Ekman-pumping area mostly overlapped the VTM area right behind Rex’s center. During the recurvature phase, cool water transported by the upwelling was more efficiently entrained into a mixed layer by the VTM for nearly a 1 near-inertial period after the passage of Rex. We then modified the entrainment formulation of Deardorff (1983), which was incorporated into a slab mixed-layer ocean model (SOM) so as to fit to the results simulated by the MRI.COM. The principal modifications are as follows: (1) consideration of turbulent kinetic energy (TKE) production caused by surface wave breaking; (2) increase in the coefficient for estimating dissipation to balance with TKE production due to turbulent transport; and (3) changing the initial guess for the critical Richardson number. These modifications led to an improvement of SST simulations by the SOM. The impact of the modifications on simulated SSTs turned out to be more significant than the impacts of initial mixed-layer depth and the difference between diurnally-varying and daily mean short-wave radiation.     

High-pressure phase transition and behavior of protons in brucite Mg(OH)2: a high-pressure–temperature study using IR synchrotron radiation

 Infrared absorption spectra of brucite Mg (OH)₂ were measured under high pressure and high temperature from 0.1 MPa 25 °C to 16 GPa 360 °C using infrared synchrotron radiation at BL43IR of Spring-8 and a high-temperature diamond-anvil cell. Brucite originally has an absorption peak at 3700 cm⁻¹, which is due to the OH dipole at ambient pressure. Over 3 GPa, brucite shows a pressure-induced absorption peak at 3650 cm⁻¹. The pressure-induced peak can be assigned to a new OH dipole under pressure. The new peak indicates that brucite has a new proton site under pressure and undergoes a high-pressure phase transition. From observations of the pressure-induced peak under various P–T condition, a stable region of the high-pressure phase was determined. The original peak shifts to lower wavenumber at −0.25 cm⁻¹ GPa⁻¹, while the pressure-induced peak shifts at −5.1 cm⁻¹ GPa⁻¹. These negative dependences of original and pressure-induced peak shifts against pressure result from enhanced hydrogen bond by shortened O–H···O distance, and the two dependences must result from the differences of hydrogen bond types of the original and pressure-induced peaks, most likely from trifurcated and bent types, respectively. Under high pressure and high temperature, the pressure-induced peak disappears, but a broad absorption band between 3300 and 3500 cm⁻¹ was observed. The broad absorption band may suggest free proton, and the possibility of proton conduction in brucite under high pressure and temperature. Received: 16 July 2001 / Accepted: 25 December 2001     

Comments on the final evolutionary phase of very small dwarf spheroidal galaxies

It is known that slow baryon outflow influences the evolution of dwarf spheroidals (dSphs) around the Milky Way. However, one may ask: what dSphs are too small? Actually, the depth of the gravitational potential of very small dSphs discovered recently is estimated as the energy of only one supernova explosion. This means that the loss of interstellar medium should be fast. Then, adopting a dSph formation scenario, which considers the fast baryon loss, we investigate which mass loss is important. According to our estimates, when only baryon mass loss is considered, the observational radius is larger than that expected in that scenario for all of the very small dSphs. This indicates that the expansion of the system is caused by slow dark matter outflow.     

The Kuroshio Current System as a jet and twin “relative” recirculation gyres embedded in the Sverdrup circulation

By analyzing the results of a realistic ocean general circulation model (OGCM) and conducting a series of idealized OGCM experiments, the dynamics of the Kuroshio Current System is examined. In the realistic configuration, the Kuroshio Current System is successfully simulated when the horizontal resolution of OGCMs is increased from 1/2° to 1/10°. The difference between the two experiments shows a jet, the model’s Kuroshio Extension, and a pair of cyclonic and anticyclonic, “relative,” recirculation gyres (RRGs) on the northern and southern flanks of the jet. We call them recirculation gyres because they share some features with ordinary recirculation gyres in previous studies, and we add the adjective “relative” to emphasize that they may not be apparent in the total field. Similar zonal jet and RRGs are obtained also in the idealized model with a rectangular basin and a flat bottom with a horizontal resolution of 1/6°. The northern RRG is generated by the injection of high potential vorticity (PV) created in the viscous sublayer of the western boundary current, indicating the importance of a no-slip boundary condition. Since there is no streamline with such high PV in the Sverdrup interior, the eastward current in the northern RRG region has to lose its PV anomaly by viscosity before connecting to the interior. In the setup stage this injection of high PV is carried out by many eddies generated from the instability of the western boundary current. This high PV generates the northern RRG, which induces the separation of the western boundary current and the formation of the zonal jet. In the equilibrium state, the anomalous high PV values created in the viscous sublayer are carried eastward in the northern flank of the zonal jet. The southern RRG is due to the classical Rhines–Young mechanism, where low PV values are advected northward within the western boundary inertial sublayer, and closed, PV-conserving streamlines form to the south of the Kuroshio Extension, allowing slow homogenization of the low PV anomalies. The westward-flowing southern branch of this southern RRG stabilizes the inertial western boundary current and prevents its separation in the northern half of the Sverdrup subtropical gyre, where the western boundary current is unstable without the stabilizing effect of the southern RRG. Therefore, in the equilibrium state, the southern RRG should be located just to the north of the center of the Sverdrup subtropical gyre, which is defined as the latitude of the Sverdrup streamfunction maximum. The zonal jet (the Kuroshio Extension) and the northern RRG gyre are formed to the north of the southern RRG. This is our central result. This hypothesis is confirmed by a series of sensitivity experiments where the location of the center of the Sverdrup subtropical gyre is changed without changing the boundaries of the subtropical gyre. The locations of the zonal jets in the observed Kuroshio Current System and Gulf Stream are consistent as well. Sensitivities of the model Kuroshio Current System are also discussed with regard to the horizontal viscosity, strength of the wind stress, and coastline.     

Simulating present climate of the global ocean–ice system using the Meteorological Research Institute Community Ocean Model (MRI.COM): simulation characteristics and variability in the Pacific sector

A long-term spin-up and a subsequent interannual simulation are conducted for the ocean–ice component of the climate model intercomparison project (CMIP)-class earth system model of the Japan Meteorological Agency/Meteorological Research Institute. This experiment has three purposes: first is to assess the ability of our model with the Coordinated Ocean–ice Reference Experiments (COREs) forcing in reproducing the present ocean-climate; second is to understand the ocean-climate variability for the past 60 years; third is to present an example of evaluating an ocean–ice interannual variability simulation. The Pacific Ocean is focused on for the last two purposes. After integrating for about 1500 years with repeated use of a detrended CORE interannual forcing, the model reaches a quasi-steady state where the present climate is reproduced satisfactorily. Then, the interannual variability simulation is conducted with the retrieved forcing trend and the result is analyzed. The simulation is successful at reproducing the long-term variability in the Pacific and surrounding oceans. Brief analyses of the tropical and mid-latitude upper layer, deep circulation, and the Arctic sea ice are presented. A caveat in treating other parts of the globe is due to the recent intense convection in the Southern Ocean caused by a remarkably increasing trend of the Southern Hemisphere westerly. Overall, the current simulation with our CMIP-class ocean–ice model is shown to be useful for studying the present ocean-climate variability, specifically in the Pacific sector. It could also be used as a benchmark control experiment that facilitates further research, model development, and intercomparison.     

Effects of large-scale wind on the Kuroshio path south of Japan in a 60-year historical OGCM simulation

The effects of large-scale wind forcing on the bimodality of the Kuroshio path south of Japan, the large meander (LM) and non-large meander (NLM), were studied by using a historical simulation (1948–2007) with a high-resolution Ocean general circulation models (OGCM). The Kuroshio in this simulation spent much time in the NLM state, and reproduced several aspects of its long-term path variability for the first time in historical OGCM simulation, presumably because the eddy kinetic energy was kept at a moderate level. By using the simulated fields, the relationships between wind forcing (or Kuroshio transport) and path variation proposed by past studies were tested, and specific roles of eddies in those variations were investigated. The long-term variation of the simulated net Kuroshio transport south of Japan was largely explained by the linear baroclinic Rossby wave adjustment to wind forcing. In the simulated LM events, a triggering meander originated from the interaction of a wind-induced positive sea surface height (SSH) anomaly with the upstream Kuroshio and was enlarged by cyclonic eddies from the recirculation gyre. The cyclonic eddy of the trigger meander was followed by a sizable anticyclonic eddy on the upstream side. Subsequently, a weak (strong) Kuroshio favored the LM (NLM). The LM tended to be maintained when the Kuroshio transport off southern Japan was small, and increasing Kuroshio transport promoted decay of an existing LM. The supply of disturbances from upstream, which is related to the wind-induced SSH variability at low latitudes, contributed to the maintenance of an existing LM.