Toward parameterization of the eddy field near the Gulf Stream

Analysis of measurements from two long-term moored arrays in and near the Gulf Stream suggests a simple parameterization of eddy spatial covariance statistics: a parameterization that can be referred to as “quasi-homogeneous and isotropic”. Taking the normalized covariance function (i.e. the correlation function) for streamfunction to be homogeneous and isotropic and assuming motions to be horizontally nondivergent and hydrostatic permit the velocity and temperature covariances to be derived from the streamfunction covariance. Statistical tests indicate that deviations from these assumptions are indistinguishable from Gaussian random noise. The spatial correlation function used in Gaussian with a decay scale of about 140 km, which is only weakly depth dependent. A simple form is also suggested for the vertical lag dependence. This parameterization permits calculation of derived quantities such as the eddy vorticity flux divergence which is discussed in the context of the mean potential vorticity balances for the depth integrated circulation and for the subthermocline layer. The divergence of the relative vorticity flux is found capable of driving two counter-rotating gyres of strength 30–40 Sv on either side of the Stream, as are observed. The “thickness flux” dominates the lower layer eddy potential vorticity flux and is of the correct sign to make the recirculation more barotropic. The lower layer eddy forcing is weak and the gyres exist in a region of nearly uniform mean potential vorticity.     

Unusual large-scale phytoplankton blooms in the equatorial Pacific

Unusual large-scale accumulations of phytoplankton occurred across 10,000 km of the equatorial Pacific during the 1998 transition from El Niño to La Niña. The forcing and dynamics of these phytoplankton blooms were studied using satellite-based observations of sea surface height, temperature and chlorophyll, and mooring-based observations of winds, hydrography and ocean currents. During the bloom period, the thermocline (nutricline) was anomalously shallow across the equatorial Pacific. The relative importance of processes that enhanced nutrient flux into the euphotic zone differed between the western and eastern regions of the blooms. In the western bloom region, the important vertical processes were turbulent vertical mixing and wind-driven upwelling. In contrast, the important processes in the eastern bloom region were wave-forced shoaling of nutrient source waters directly into the euphotic zone, along-isopycnal upwelling, and wind-driven upwelling. Advection by the Equatorial Undercurrent spread the largest bloom 4500 km east of where it began, and advection by meridional currents of tropical instability waves transported the bloom hundreds of kilometers north and south of the equator. Many processes influenced the intricate development of these massive biological events. Diverse observations and novel analysis methods of this work advance the conceptual framework for understanding the complex dynamics and ecology of the equatorial Pacific.     

Relationships between chlorophyll a, bacteria, ATP, POC and respiration rates in the Changjiang Estuary and the plume

Bacteria abundance, chlorophyll a, ATP and POC concentrations and respiration rates of microorganisms in the Changjiang Estuary and the plume were determined in July 1986. The high values of bacteria abundance occurred in the river mouth in association with suspended matter. It is assumed that bacteria were the major contributor to ATP and the main consumer of dissolved oxygen, and that the relationship between ATP and POC was present in that area. In the dilution zone (salinity; 25-30), instead of bacteria, phytoplankton was the major contributor to ATP and respiration rates, due to diatom bloom. Close relationships between Chi a and ATP, and ATP and POC were observed. Contribution of microbial carbon to POC was also estimated.     

Circannual Cycle and Oxygen Consumption in Eudendrium glomeratum (Cnidaria, Anthomedusae): Studies on a Shallow Water Population

Abstract. The oxygen consumption of Eudendrium glomeratum was measured monthly, throughout the period of active presence of the species in the field, to obtain indications on its physiological condition in the different phases of the cycle. Sets of one hundred polyps were assayed in the laboratory under normothermic (according to field temperature: 14–19°C) and hyperthermic conditions (22–25°C). The different response to identical temperatures at the extremes of the cycle, together with a differential ability to face stressful conditions in the same periods, suggests that other factors, besides temperature, regulate the seasonal cycle of Eudendrium glomeratum.     

Linkages between Alaskan sockeye salmon abundance, growth at sea, and climate, 1955–2002

We tested the hypothesis that increased growth of salmon during early marine life contributed to greater survival and abundance of salmon following the 1976/1977 climate regime shift and that this, in turn, led to density-dependent reductions in growth during late marine stages. Annual measurements of Bristol Bay (Bering Sea) and Chignik (Gulf of Alaska) sockeye salmon scale growth from 1955 to 2002 were used as indices of body growth. During the first and second years at sea, growth of both stocks tended to be higher after the 1976–1977 climate shift, whereas growth during the third year and homeward migration was often below average. Multiple regression models indicated that return per spawner of Bristol Bay sockeye salmon and adult abundance of western and central Alaska sockeye salmon were positively correlated with growth during the first 2 years at sea and negatively correlated with growth during later life stages. After accounting for competition between Bristol Bay sockeye and Asian pink salmon, age-specific adult length of Bristol Bay salmon increased after the 1976–1977 regime shift, then decreased after the 1989 climate shift. Late marine growth and age-specific adult length of Bristol Bay salmon was exceptionally low after 1989, possibly reducing their reproductive potential. These findings support the hypothesis that greater marine growth during the first 2 years at sea contributed to greater salmon survival and abundance, which in turn led to density-dependent growth during later life stages when size-related mortality was likely lower. Our findings provide new evidence supporting the importance of bottom-up control in marine ecosystems and highlight the complex dynamics of species interactions that continually change as salmon grow and mature in the ocean.     

Field observations of waves generated by passing ships: A note

This short contribution reports the results of a field study on the nearshore characteristics of waves generated by both conventional and high speed passenger ferries. The field observations took place in the late summer of 2005, at a beach close to the port of Mytilene (Island of Lesbos, Greece), and involved the visual observation of ship waves, using digital video recordings and image processing techniques. The results showed that passage of the fast ferry was associated with a longer, more complex and energetic nearshore event; this event not only did include higher nearshore waves (up to 0.74 m) and was organised in different wave packets, but it was also an order of magnitude longer (∼ 680 s) than the conventional ferry event. Regarding the effects on beach sediment dynamics, the fast ferry waves were estimated to be very efficient in mobilising the nearshore sediments in contrast to those of the conventional ferry. The fast ferry service appears to generate daily prolonged nearshore events, which contain waves with higher energy than those expected from the normal summer wind wave regime of the area; these events also include some high and very steep waves, which can be particularly erosive. Therefore, fast ferry wakes may have considerable impacts on the seasonal beach sediment dynamics/morphodynamics and the nearshore benthic ecology, as well as they may pose significant risks to bathers, affecting the recreational use of the beaches exposed to fast ferry traffic. Finally, the study has shown that satisfactory field observations of the nearshore characteristics of ship-generated (and wind) waves can be obtained using inshore deployments of calibrated poles, digital video cameras and appropriate image processing algorithms.     

Spatial and temporal variability of the ratios between the nitrate and phosphate concentrations in the Sea of Okhotsk

The relation between the nitrate and phosphate concentrations in the Sea of Okhotsk and the bordering waters of the Pacific Ocean were studied. The surveys were carried out in the autumn, spring, and summer of 2001–2002. For the deepwater part of the sea, the relation [NO^? ₃] = ((14.88 ± 0.07) × [PO^3? ₄] ? 5.46 ± 0.17) was found. The coefficients in the equation given are statistically different from those in the similar equation for the Pacific waters: [NO^? ₃] = (16.05 ± 0.15) × [PO^3? ₄]-(7.23 ± 0.36). In the northern part of the sea; on the shelf; in the slope area; and, especially, in the deep waters of the TINRO Depression, the linear dependence between the phosphate and nitrate concentrations was distorted. This feature was described in terms of nitrate deficiency. The maximum values of this deficiency were found in the near-bottom waters. The principal processes that might cause the nitrate deficiency were considered: the difference in the oxidation rates of the nitrogen and phosphorus organic compounds, the matter transfer between the continent and the sea, the different efficiency of the biogenic burial of nitrogen and phosphorus in the bottom sediments, and the denitrification in the upper layer of the bottom sediments. It was shown that the most probable cause of the nitrate deficiency was the denitrification. The loss of inorganic nitrogen owing to the supply of the waters of the Sea of Okhotsk to the Pacific Ocean was estimated as ～2.5 × 10¹¹ mol N/year.     

An optimized method for automated analysis of algal pigments by HPLC

A recent development in algal pigment analysis by high-performance liquid chromatography (HPLC) is the application of automation. An optimization of a complete sampling and analysis protocol applied specifically in automation has not yet been performed. In this paper we show that automation can only be successful if the various methodological aspects of the sampling and analysis protocol are considered in coherence. We introduce an optimized protocol that involves freeze-drying of the sample, subsequent extraction in 90% acetone and the application of water-packing during analysis. The method was evaluated on both natural plankton populations and a broad spectrum of microalgal cultures: Thalassiosira weisflogii (Bacillariophyceae), Emiliania huxleyi (Prymnesiophyceae), Phaeocystis globosa and Phaeocystis antarctica (Prymnesiophyceae) and Pyramimonas sp. (Prasinophyceae). Whereas pigment extracts were unstable in methanol, with recorded chlorophyll a losses from 10% to 60% per day, pigment degradation rates in acetone were generally less than 1% over 18 h storage in the autosampler (4 °C). In addition, it was found that the extraction efficiency of acetone significantly increased upon freeze-drying prior to extraction. Increases as high as 50–60% were measured in P. antarctica. The application of water-packing of the sample during injection resulted in improved peak shape and peak separation, without diluting the pigment concentrations. Automation is especially beneficial for application in the field, when mixed algal assemblages and low biomass put a high demand on the sensitivity as well as reproducibility of the method.