Microfacies and diagenesis of older Pleistocene (pre‐last glacial maximum) reef deposits,Great Barrier Reef,Australia (IODP Expedition 325): A quantitative approach

During Integrated Ocean Drilling Program Expedition 325, 34 holes were drilled along five transects in front of the Great Barrier Reef of Australia, penetrating some 700 m of late Pleistocene reef deposits (post‐glacial; largely 20 to 10 kyr bp ) in water depths of 42 to 127 m. In seven holes, drilled in water depths of 42 to 92 m on three transects, older Pleistocene (older than last glacial maximum, >20 kyr bp ) reef deposits were recovered from lower core sections. In this study, facies, diagenetic features, mineralogy and stable isotope geochemistry of 100 samples from six of the latter holes were investigated and quantified. Lithologies are dominated by grain‐supported textures, and were to a large part deposited in high‐energy, reef or reef slope environments. Quantitative analyses allow 11 microfacies to be defined, including mixed skeletal packstone and grainstone, mudstone‐wackestone, coral packstone, coral grainstone, coralline algal grainstone, coral‐algal packstone, coralline algal packstone, Halimeda grainstone, microbialite and caliche. Microbialites, that are common in cavities of younger, post‐glacial deposits, are rare in pre‐last glacial maximum core sections, possibly due to a lack of open framework suitable for colonization by microbes. In pre‐last glacial maximum deposits of holes M0032A and M0033A (>20 kyr bp ), marine diagenetic features are dominant; samples consist largely of aragonite and high‐magnesium calcite. Holes M0042A and M0057A, which contain the oldest rocks (>169 kyr bp ), are characterized by meteoric diagenesis and samples mostly consist of low‐magnesium calcite. Holes M0042A, M0055A and M0056A (>30 kyr bp ), and a horizon in the upper part of hole M0057A, contain both marine and meteoric diagenetic features. However, only one change from marine to meteoric pore water is recorded in contrast with the changes in diagenetic environment that might be inferred from the sea‐level history. Values of stable isotopes of oxygen and carbon are consistent with these findings. Samples from holes M0032A and M0033A reflect largely positive values (δ¹⁸O: ?1 to +1‰ and δ¹³C: +1 to +4‰), whereas those from holes M0042A and M0057A are negative (δ¹⁸O: ?4 to +2‰ and δ¹³C: ?8 to +2‰). Holes M0055A and M0056A provide intermediate values, with slightly positive δ¹³C, and negative δ¹⁸O values. The type and intensity of meteroric diagenesis appears to have been controlled both by age and depth, i.e. the time available for diagenetic alteration, and reflects the relation between reef deposition and sea‐level change.     

Meteorological noise in crustal gas emission and relevance to geochemical exploration

The emission of gas from the earth's crust is a complex process influenced by meteorological and seasonal processes which must be understood for effective application of gas emission to geochemical exploration. Free mercury vapor emission and radon emanation are being measured in a shallow instrument vault at a single nonmineralized site in order to evaluate these influences on gas emission.Mercury concentrations in the instrument vault average 9.5 ng/m³ and range from < 1 ng/m³ to 53 ng/m³ with a strong seasonal effect. Mercury has a direct relationship to vault temperature, air temperature, soil temperature, barometric pressure, water table, and the frozen or thawed state of the soil. Air and soil temperature, barometric pressure, and relative humidity are most important in influencing mercury emission while soil moisture is also important in radon emanation. Diurnal cycles are common but do not occur on all days. A heavy precipitation event on a dry soil seals the soil resulting in a rise in mercury concentration. Precipitation on a soil that is already wet does not increase mercury emission because of the compensation caused by lowering of the soil temperature by the precipitation event. Freezing of the soil changes the physical state of the vault-soil-soil gas-atmosphere system and emits the lowest concentrations of mercury. Phase lag effects are likely important. Stepwise multiple regression of mercury as dependent variable with meteorological and seasonal parameters as independent variables gives a cumulative R value of 0.563 and R² of 0.317. The short-term noise coupled with phase lags are an important factor.The radon measurements integrated over weekly intervals smooth out much of the short-term noise. Stepwise multiple regression of radon as dependent variable with meteorological and seasonal parameters as independent variables gives a cumulative R value of 0.967 and R² of 0.934. In this portion of the study the variation in the radon emanation is adequately predicted by meteorological and seasonal parameters.     

Source structure and dynamics of Pc 1 pulsations at low latitudes

Structured Pc 1 signals propagate in the ionospheric F2 region duct from their secondary sources at high latitudes to lower latitudes. Propagation directions to low latitude stations can be inferred from measurements of polarization parameters. The analysis of five events recorded at two low latitude stations (L = 1.9) are presented. Direction of arrival measurements are used to investigate the spatial and temporal structure of Pc 1 sources. Results show a close relationship between the structure of events identified in the frequency-time representation and direction of arrival measurement patterns. Multiple sources are sometimes indicated.     

Biogeochemical Zones Within a Macrotidal,Dry-Tropical Fluvial-Marine Transition Area: A Dry-Season Perspective

The Fitzroy River delivers large amounts of nutrients and fine sediments to Keppel Bay (contiguous with the Great Barrier Reef Lagoon) during intermittent flow events. This study explores sources, forms and transformations of nutrients in Keppel Bay, and develops a functional process zonation that integrates seabed geochemistry and water column nutrient characteristics which are controlled by suspended sediment. The water column and seabed properties were investigated over two dry seasons, with supplementary core incubations taken to measure carbon decomposition rates and nutrient fluxes. Keppel Bay can be divided into three zones, the: zone of maximum resuspension (ZMR); coastal transitional zone (CTZ); and blue water zone (BWZ). Mineralisation of predominantly terrestrial organic matter occurs in the ZMR where nutrient uptake by phytoplankton is light limited. The CTZ and BWZ had higher light penetration and phytoplankton growth was likely limited by N and P, respectively. The identified zones conform to the bathymetry and hydrodynamic characteristics of the bay, allowing for the development of an integrated conceptual model accounting for the benthic and pelagic biogeochemical processes. Recognition of these different zones shows that considerable variation in benthic and water column properties is possible within a small system with the bathymetric and hydrodynamic characteristics of the fluidized bed reactor.     

Be-daughter minerals in fluid and melt inclusions: implications for the enrichment of Be in granite–pegmatite systems

The study of re-homogenized melt inclusions in the same growth planes of quartz of pegmatites genetically linked to the Variscan granite of the Ehrenfriedersdorf complex, Erzgebirge, Germany, by ion microprobe analyses has determined high concentrations of Be, up to 10,000 ppm, in one type of melt inclusion, as well as moderate concentrations in the 100 ppm range in a second type of melt inclusion. Generally, the high Be concentrations are associated with the H₂O- and other volatile-rich type-B melt inclusions, and the lower Be concentration levels are connected to H₂O-poor type-A melt inclusions. Both inclusion types, representing conjugate melt pairs, are formed by a liquid–liquid immiscibility separation process. This extremely strong and very systematic scattering in Be provides insights into the origin of Be concentration and transport mechanisms in pegmatite-forming melts. In this contribution, we present more than 250 new analytical data and show with ion microprobe and fs-LA-ICPMS studies on quenched glasses, as well as with confocal Raman spectroscopy of daughter minerals in unheated melt inclusions, that the concentrations of Be may achieve such extreme levels during melt–melt immiscibility of H₂O-, B-, F-, P-, ± Li-enriched pegmatite-forming magmas. Starting from host granite with about 10 ppm Be, melt inclusions with 10,000 ppm Be correspond to enrichment by a factor of over 1,000. This strong enrichment of Be is the result of processes of fractional crystallization and further enrichment in melt patches of pegmatite bodies due to melt–melt immiscibility at fluid saturation. We also draw additional conclusions regarding the speciation of Be in pegmatite-forming melt systems from investigation of the Be-bearing daughter mineral phases in the most H₂O-rich melt inclusions. In the case of evolved volatile and H₂O-rich pegmatite systems, B, P, and carbonates are important for the enrichment and formation of stable Be complexes.     

The Entrainment Rate for Buoyant Plumes in a Crossflow

We consider large-eddy simulations (LES) of buoyant plumes from a circular source with initial buoyancy flux F ₀ released into a stratified environment with constant buoyancy frequency N and a uniform crossflow with velocity U. We make a systematic comparison of the LES results with the mathematical theory of plumes in a crossflow. We pay particular attention to the limits [(U)\tilde] << 1{\tilde{U}\ll1} and [(U)\tilde] >> 1{\tilde{U}\gg 1}, where [(U)\tilde]=U/(F₀ N)^1/4{\tilde{U}=U/(F_0 N)^{1/4}}, for which analytical results are possible. For [(U)\tilde] >> 1{\tilde{U}\gg 1}, the LES results show good agreement with the well-known two-thirds law for the rise in height of the plume. Sufficiently far above the source, the centreline vertical velocity of the LES plumes is consistent with the analytical z ^−1/3 and z ^−1/2 scalings for respectively [(U)\tilde] << 1{\tilde{U}\ll 1} and [(U)\tilde] >> 1{\tilde{U}\gg 1}. In the general case, where the entrainment is assumed to be the sum of the contributions from the horizontal and vertical velocity components, we find that the discrepancy between the LES data and numerical solutions of the plume equations is largest for [(U)\tilde]=O(1){\tilde{U}=O(1)}. We propose a modified additive entrainment assumption in which the contributions from the horizontal and vertical velocity components are not equally weighted. We test this against observations of the plume generated by the Buncefield fire in the U.K. in December 2005 and find that the results compare favourably. We also show that the oscillations of the plume as it settles down to its final rise height may be attenuated by the radiation of gravity waves. For [(U)\tilde] << 1{\tilde{U}\ll 1} the oscillations decay rapidly due to the transport of energy away from the plume by gravity waves. For ${\tilde{U}>rsim 1}${\tilde{U}>rsim 1} the gravity waves travel in the same direction and at the same speed as the flow. In this case, the oscillations of the plume do not decay greatly by radiation of gravity waves.     

Reducing dissolved inorganic nitrogen in surface runoff water from sugarcane production systems

Nitrogen (N) lost from farms, especially as the highly bioavailable dissolved inorganic form, may be damaging Australia's Great Barrier Reef (GBR). As sugarcane is the dominant cropping system in GBR catchments, its N management practises are coming under increasing scrutiny. This study measured dissolved inorganic N lost in surface runoff water and sugarcane productivity over 3 years. The experiment compared the conventional fertiliser N application rate to sugarcane (average 180kg N/ha/year) and a rate based on replacing N exported in the previous crop (average 94kg N/ha/year). Dissolved inorganic N losses in surface water were 72%, 48% and 66% lower in the three monitored years in the reduced N fertiliser treatment. There was no significant difference in sugarcane yield between the two fertiliser N treatments, nor any treatment difference in soil mineral N - both of these results are indicators of the sustainability of the lower fertiliser N applications.     

Ocean–atmosphere coupling and the boreal winter MJO

The influence of ocean–atmosphere coupling on the simulation and prediction of the boreal winter Madden–Julian Oscillation (MJO) is examined using the Seoul National University coupled general circulation model (CGCM) and atmospheric—only model (AGCM). The AGCM is forced with daily SSTs interpolated from pentad mean CGCM SSTs. Forecast skill is examined using serial extended simulations spanning 26 different winter seasons with 30-day forecasts commencing every 5 days providing a total of 598 30-day simulations. By comparing both sets of experiments, which share the same atmospheric components, the influence of coupled ocean–atmosphere processes on the simulation and prediction of MJO can be studied. The mean MJO intensity possesses more realistic amplitude in the CGCM than in AGCM. In general, the ocean–atmosphere coupling acts to improve the simulation of the spatio-temporal evolution of the eastward propagating MJO and the phase relationship between convection (OLR) and SST over the equatorial Indian Ocean and the western Pacific. Both the CGCM and observations exhibit a near-quadrature relationship between OLR and SST, with the former lagging by about two pentads. However, the AGCM shows a less realistic phase relationship. As the initial conditions are the same in both models, the additional forcing by SST anomalies in the CGCM extends the prediction skill beyond that of the AGCM. To test the applicability of the CGCM to real-time prediction, we compute the Real-time Multivariate MJO (RMM) index and compared it with the index computed from observations. RMM1 (RMM2) falls away rapidly to 0.5 after 17–18 (15–16) days in the AGCM and 18–19 (16–17) days in the CGCM. The prediction skill is phase dependent in both the CGCM and AGCM.     

The transition from peraluminous to peralkaline granitic melts: Evidence from melt inclusions and accessory minerals

Fractional crystallization of peraluminous F- and H₂O-rich granite magmas progressively enriches the remaining melt with volatiles. We show that, at saturation, the melt may separate into two immiscible conjugate melt fractions, one of the fractions shows increasing peraluminosity and the other increasing peralkalinity. These melt fractions also fractionate the incompatible elements to significantly different degrees. Coexisting melt fractions have differing chemical and physical properties and, due to their high density and viscosity contrasts, they will tend to separate readily from each other. Once separated, each melt fraction evolves independently in response to changing T/P/X conditions and further immiscibility events may occur, each generating its own conjugate pair of melt fractions. The strongly peralkaline melt fractions in particular are very reactive and commonly react until equilibrium is attained. Consequently, the peralkaline melt fraction is commonly preserved only in the isolated melt and mineral inclusions.

We demonstrate that the differences between melt fractions that can be seen most clearly in differing melt inclusion compositions are also visible in the composition of the resulting ore-forming and accessory minerals, and are visible on scales from a few micrometers to hundreds of meters.     

Airborne Laser-Induced Fluorescence (LIF) Light Detection and Ranging (LiDAR) for the Quantification of Dissolved Organic Matter Concentration in Natural Waters

Analysis of dissolved organic matter (DOM) concentration and composition is essential to quantifying biological and chemical oxygen demand and atmosphere?Cocean heat flux exchange in natural waters. However, manual water sampling is costly and time consuming over large areas. The purpose of this research was to analyze the applicability of airborne laser-induced fluorescence light detection and ranging (LiDAR) for the detection of DOM in estuarine ecosystems impacted by agriculture. A fluorescence LiDAR system (Airborne Marine) (FLS-AM) was used to assess the DOM concentration of the Annapolis River and Basin, Nova Scotia, Canada, as well as three rivers and their estuaries in Prince Edward Island, Canada. Two FLS-AM flight missions were conducted in the summers of 2008 and 2009 and the resulting datasets were compared with spectral fluorescence signature (SFS DOM) and dissolved organic carbon (DOC) analysis of in situ water samples. Significant positive correlations were found at five of seven sites between the FLS-AM DOM and SFS DOM relationship which indicates that the FLS-AM sensor is a good surrogate for traditional sample collection of DOM data in estuaries in this region. Positive correlations were also found at all sites between FLS-AM DOM values and DOC. FLS-AM DOM patterns show that DOM values are significantly higher in rivers and estuaries that drain watersheds which are heavily impacted by agricultural practices. The results of this study show that the FLS-AM can be used efficiently as a general indicator for how estuaries are affected by runoff from agricultural watersheds in real time and thus reduce the requirement for traditional water sample collection and laboratory analysis methods.