Reconstruction of contaminant trends in a salt wedge estuary with sediment cores dated using a multiple proxy approach

The Taunton River is a partially mixed tidal estuary in southeastern Massachusetts (USA) which has received significant contaminant inputs, yet little information exists on the history of discharge and the subsequent fate of these contaminants. Three sediment cores taken along a transect were analyzed, reconstructing the spatial and temporal trends of pollution in the estuary. A combination of radiometric dating, contaminant markers, and storm layers from major hurricanes were used to establish age models and sedimentation rates. Age estimates obtained from the different dating methods compared well, establishing an accurate history of contaminant release to the estuary. Polycyclic aromatic hydrocarbons (PAHs) were present in one core at depths corresponding to the early 1860s, earlier than previously established dates of introduction. Temporal and spatial trends of Cr, Cu, Hg and Pb indicated multiple sources of varying input to the river. Polychlorinated biphenyls (PCBs) were present in each of the cores from the 1930s onward, with elevated levels still present in surficial sediments at several sites. A unique organic compound, Topanol, which was produced locally was used as a tracer to track contaminant transport in the river. Tracer data indicates that contaminants are still being transported and deposited to surficial sediments at high concentrations well after their discharge. This reconstruction demonstrates the utility of using multiple dating proxies where often the sole use of radiometric dating techniques is not an option and provides insights into the fate of contaminants discharged decades ago but continue to represent environmental risks.     

Shoreline variability via empirical orthogonal function analysis: Part I temporal and spatial characteristics

Empirical orthogonal functions (EOFs) or principal components were used to extract the significant modes of shoreline variability from several data sets collected at three very different locations. Although EOFs have proven to be a valuable tool in the analysis of nearshore data, most applications have focused on the ability of the technique to describe cross-shore or profile variability. Here however, EOFs were used to help identify the dominant modes of longshore shoreline variability at Duck, North Carolina, the Gold Coast, Australia, and at several locations within the Columbia River Littoral Cell in the U.S. Pacific Northwest. In part one of this analysis, characteristic patterns of shoreline variability identified by the EOF analysis are described in detail. At each site, the dominant modes consisting of the first four eigenfunctions were found to describe nearly 95% of the total shoreline variability. At both Duck and the Gold Coast, several interesting longshore periodic features suggestive of sand waves were identified, while boundary effects related to natural headlands and navigational structures/entrances dominated the Pacific Northwest data sets.     

Linkages between Alaskan sockeye salmon abundance, growth at sea, and climate, 1955–2002

We tested the hypothesis that increased growth of salmon during early marine life contributed to greater survival and abundance of salmon following the 1976/1977 climate regime shift and that this, in turn, led to density-dependent reductions in growth during late marine stages. Annual measurements of Bristol Bay (Bering Sea) and Chignik (Gulf of Alaska) sockeye salmon scale growth from 1955 to 2002 were used as indices of body growth. During the first and second years at sea, growth of both stocks tended to be higher after the 1976–1977 climate shift, whereas growth during the third year and homeward migration was often below average. Multiple regression models indicated that return per spawner of Bristol Bay sockeye salmon and adult abundance of western and central Alaska sockeye salmon were positively correlated with growth during the first 2 years at sea and negatively correlated with growth during later life stages. After accounting for competition between Bristol Bay sockeye and Asian pink salmon, age-specific adult length of Bristol Bay salmon increased after the 1976–1977 regime shift, then decreased after the 1989 climate shift. Late marine growth and age-specific adult length of Bristol Bay salmon was exceptionally low after 1989, possibly reducing their reproductive potential. These findings support the hypothesis that greater marine growth during the first 2 years at sea contributed to greater salmon survival and abundance, which in turn led to density-dependent growth during later life stages when size-related mortality was likely lower. Our findings provide new evidence supporting the importance of bottom-up control in marine ecosystems and highlight the complex dynamics of species interactions that continually change as salmon grow and mature in the ocean.     

Response behaviour of triangular tension leg platforms under impact loading

Excellent station keeping characteristics and relative insensitivity with increasing water depth make triangular tension leg platforms (TLPs) a proven concept in deep water oil exploration. TLPs are often subjected to less probable forces which arise due to collision of ships, icebergs or any other huge sea creature. Dynamic analysis of two triangular TLP models at water depths 1200 and 527.8 m is performed under regular waves along with impulse load acting at an angle of 45 degrees at the TLP column. Hydrodynamic forces on these TLPs are evaluated using modified Morison equation, based on water particle kinematics arrived at using Stokes’ fifth order wave theory. Based on numerical studies conducted, it is seen that impulse loading acting on corner column of TLP significantly affect its response while that acting on pontoons dose not affect TLPs behaviour.     

On the recent warming of the southeastern Bering Sea shelf

During the last decade, the southeastern Bering Sea shelf has undergone a warming of 3 °C that is closely associated with a marked decrease of sea ice over the area. This shift in the physical environment of the shelf can be attributed to a combination of mechanisms, including the presence over the eastern Bering Sea shelf of a relatively mild air mass during the winter, especially from 2000 to 2005; a shorter ice season caused by a later fall transition and/or an earlier spring transition; increased flow through Unimak Pass during winter, which introduces warm Gulf of Alaska water onto the southeastern shelf; and the feedback mechanism whereby warmer ocean temperatures during the summer delay the southward advection of sea ice during winter. While the relative importance of these four mechanisms is difficult to quantify, it is evident that for sea ice to form, cold arctic winds must cool the water column. Sea ice is then formed in the polynyas during periods of cold north winds, and this ice is advected southward over the eastern shelf. The other three mechanisms can modify ice formation and melt, and hence its extent. In combination, these four mechanisms have served to temporally and spatially limit ice during the 5-year period (2001–2005). Warming of the eastern Bering Sea shelf could have profound influences on the ecosystem of the Bering Sea—from modification of the timing of the spring phytoplankton bloom to the northward advance of subarctic species and the northward retreat of arctic species.     

Algorithm for non-hydrostatic dynamics in the Regional Oceanic Modeling System

A non-hydrostatic algorithm for the Regional Oceanic Modeling System (ROMS) is proposed. It is based on a decomposition technique for hydrostatic and non-hydrostatic pressure. The algorithm has a pressure-correction scheme with split-explicit time-stepping for baroclinic and barotropic vertical modes with a free surface. The algorithm implementation requires solving a Poisson equation for a non-hydrostatic pressure that has a non-symmetric matrix in discrete form. The efficiency of a different class of solvers and preconditioners were tested. The algorithm is successfully implemented with several examples where non-hydrostatic effects are important. These include standing external gravity waves; strongly nonlinear internal wave generation and transformation; stratified shear instability and its associated mixing; and nonlinear internal tidal generation over a ridge. The corresponding changes in the pre-processing and post-processing infrastructure in the existing hydrostatic ROMS code were performed to implement parallel elliptic solvers and a new set of dynamical equations.     

The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilation systems: Part II - Performance and application to the California Current System

The Regional Ocean Modeling System (ROMS) 4-dimensional variational (4D-Var) data assimilation systems have been systematically applied to the mesoscale circulation environment of the California Current to demonstrate the performance and practical utility of the various components of ROMS 4D-Var. In particular, we present a comparison of three approaches to 4D-Var, namely: the primal formulation of the incremental strong constraint approach; the dual formulation “physical-space statistical analysis system”; and the dual formulation indirect representer approach. In agreement with theoretical considerations all three approaches converge to the same ocean circulation estimate when using the same observations and prior information. However, the rate of convergence of the dual formulation was found to be inferior to that of the primal formulation. Other aspects of the 4D-Var performance that relate to the use of multiple outer-loops, preconditioning, and the weak constraint are also explored. A systematic evaluation of the impact of the various components of the 4D-Var control vector (i.e. the initial conditions, surface forcing and open boundary conditions) is also presented. It is shown that correcting for uncertainties in the model initial conditions exerts the largest influence on the ability of the model to fit the available observations. Various important diagnostics of 4D-Var are also examined, including estimates of the posterior error, the information content of the observation array, and innovation-based consistency checks on the prior error assumptions. Using these diagnostic tools, we find that more than 90% of the observations assimilated into the model provide redundant information. This is a symptom of the large percentage of satellite data that are used and to some extent the nature of the data processing employed. This is the second in a series of three papers describing the ROMS 4D-Var systems.     

Marine renewable energy: The ecological implications of altering the hydrodynamics of the marine environment

Many countries now recognise the need for mitigation of climate change induced by human activities and have incorporated renewable energy resources within their energy policy. There are extensive resources of renewable energy within the marine environment and increasing interest in extracting energy from locations with either large tidal range, rapid flow with and without wave interaction, or large wave resources. However, the ecological implications of altering the hydrodynamics of the marine environment are poorly understood. Ecological data for areas targeted for marine renewable developments are often limited, not least because of the considerable challenges to sampling in high energy environments. In order to predict the scale and nature of ecological implications there is a need for greater understanding of the distribution and extent of the renewable energy resource and in turn, of how marine renewable energy installations (MREIs) may alter energy in the environment. Regional ecological implications of a MREI need to be considered against the greater and global ecological threat of climate change. Finally, it is recommended that the identification of species and biotopes susceptible to the removal of hydrokinetic energy could be a suitable strategy for understanding how a MREI may alter flow conditions.     

Resilience assessment on coastline changes and urban settlements: A case study in Seribu Islands, Indonesia

The sustainable development in the ocean and costal areas has been an issue for the archipelago nation. Since two decades ago, some archipelago nations have attempted to implement the concept of both scientifically and politically sounding sustainability. The vulnerability assessment is one of the methods that are being used to measure the ocean and coastal sustainability in order to have better evaluation and redesign of the land development as well as policy making. Most of the vulnerability assessment has been conducted based on pressures, damages and changes that involve in the region. A common understanding of the vulnerability assessment is that there are three aspects to be considered: hazards, resilience and damages. These three aspects must be well defined at first in order to have better indicators or sub-indices for the vulnerability index. There are several issues and factors that should be considered before performing the vulnerability assessment. Firstly, each country has different coastal characteristics due to a different geologic process. Secondly, the three aspects of the vulnerability (i.e. hazards, resilience and damages) are impacting on each country at a different scale. Thirdly, the vulnerability of a small island region is different from that of a large island region. Finally, policies and regulations vary in each country.From the data analysis results, it is found that the urban settlement in Seribu Islands is one of the resilient factors in addition to the geological and geomorphological conditions. The resilience factors in Seribu Islands are classified into four categories: 1) settlements area, 2) population density, 3) hard infrastructure such as airfields, ports and roads, 4) geological process such as abrasion and erosion. Based on the island characteristics of Seribu Islands, a unique vulnerability index that fits to this locality is developed. It is shown that the vulnerability index developed in this study can measure the resilience of Seribu Islands. In addition to the aforementioned resilience factors, the unique geographical condition and the geological stability in Seribu Islands made the outer islands become a barrier from oceanographic conditions and made the inner islands protected. However, the population growth made significant changes in terms of ecology, water, sanitation and pollution within the region.     

Deep-sea nematode assemblage has not recovered 26 years after experimental mining of polymetallic nodules (Clarion-Clipperton Fracture Zone, Tropical Eastern Pacific)

We investigated nematode assemblages inhabiting the 26-year-old track created by experimental deep-sea mining of polymetallic nodules, and two adjacent, undisturbed sites, one with nodules and one without nodules. The aim was to compare density, assemblage structure, and diversity indices in order to assess the process of recovery of the nematode assemblage inhabiting the disturbed site. This experimental dredging was conducted in 1978 by the Ocean Minerals Company (USA) in the area of a French mining claim in the Clarion-Clipperton Fracture Zone (Tropical Eastern Pacific) at a depth of about 5000 m. The nematode assemblage had not returned its initial state 26 years after the experimental dredging: the total nematode density and biomass within the dredging track were significantly lower than outside the track; the biodiversity indices showed significantly lower nematode diversity within the track; and the structure of the nematode assemblage within the track differed significantly from those in the two undisturbed sites outside the track. However, there were no significant differences in the mean body volumes of adult nematodes and adult-juvenile ratios between the track and reference sites. Parameters such as the rate of sediment restoration (which depends on local hydrological conditions) and the degree and character of the disturbance appeared to be of considerable importance for the recovery rate of the deep-sea nematode assemblages and their ability to recolonize disturbed areas. The rates of recolonization and recovery may vary widely in different deep-sea regions.