Characterization of polychlorinated biphenyls and brominated flame retardants in sediments from riverine and coastal waters of Surabaya, Indonesia

A total of 33 surficial sediments from riverine and coastal waters from Surabaya, Indonesia were analyzed for PCBs and BFRs. Concentrations of PCBs (62 congeners), PBDEs (14 congeners) and HBCDs (3 isomers) varied from <DL-420, <DL-35 and <DL-5.4 ng g⁻¹ dw, respectively. Higher concentrations of these compounds were found in riverine than coastal sediments. Their levels and distribution were influenced by proximity to the point sources and TOC. The predominant congeners were CB-153, -28, -138, -149, -180, -33 and BDE-209, -207, -206, -197, -196, -183, -99, -47 for PCBs and PBDEs, respectively, and γ-isomer for HBCDs. Debromination of BDE-209 might be taking place producing lower toxic congeners in sediment. Levels of PCBs in riverine sediments were comparable with some polluted areas worldwide, but PBDEs and HBCDs were lower. Hazard assessment of PCBs indicated possible toxic potential, particularly in areas close to point sources.     

Expression of superoxide dismutase (SOD) genes from the copper-exposed polychaete, Neanthes succinea

To evaluate the superoxide dismutase (SOD) genes as a potential indicator of environmental stress, we cloned and sequenced the full-length cDNA of a Cu/Zn-SOD and Mn-SOD genes from the marine polychaete, Neanthes succinea. Ns-Cu/Zn- and Mn-SOD expression was measured using quantitative real-time RT-PCR in response to the oxidative stress induced by copper in the form of CuCl2. Ns-Cu/Zn-SOD expression increased in a dose dependent manner but the increase of Mn-SOD expression was evident only at a high concentration of copper. Particularly, Ns-Mn-SOD dramatically increased in the 72 μg/L CuCl2-exposed groups, indicating that both Ns-SOD genes were induced by copper exposure. These results suggest that Ns-Cu/Zn- and Ns-Mn-SOD would play important roles in the detoxification of cellular oxidative stresses in the polychaete, N. succinea. Furthermore, as part of field work, the marine polychaete, N. succineaCu/Zn-SOD mRNA collected from the polluted area was accordingly upregulated in expression but not for NS-Mn-SOD.     

Immune responses to combined effect of hypoxia and high temperature in the green-lipped mussel Perna viridis

Flow cytometry was used to examine immune responses in haemocytes of the green-lipped mussel Perna viridis under six combinations of oxygen level (1.5 mg O2 l(-1), 6.0 mg O2 l(-1)) and temperature (20 °C, 25 °C and 30 °C) at 24 h, 48 h, 96 h and 168 h. The mussels were then transferred to normoxic condition (6.0 mg O2 l(-1)) at 20 °C for further 24 h to study their recovery from the combined hypoxic and temperature stress. Esterase (Est), reactive oxygen species (ROS), lysosome content (Lyso) and phagocytosis (Pha) were reduced at high temperatures, whereas hypoxia resulted in higher haemocyte mortality (HM) and reduced phagocytosis. For HM and Pha, changes were observed after being exposed to the stresses for 96 h, whereas only a 24 h period was required for ROS and Lyso, and a 48 h one for Est. Recovery from the stresses was observed for HM and Pha but not other immune responses.     

Stabilization of arsenic-contaminated mine tailings using natural and calcined oyster shells

Natural oyster shells (NOS) and calcined oyster shells (COS) were used to immobilize arsenic (As) from contaminated mine tailings. In addition, a blend of Portland cement (PC)/cement kiln dust (CKD) was used as a stabilizing agent. The Korean Standard Test (KST) method (1 N HCl extraction) was used to evaluate the effectiveness of the treatment. The experimental results showed that COS effectively immobilized As in treated mine tailings. Specifically, an As concentration less than 1 mg L⁻¹ was obtained following COS treatment at 25 and 30 wt%. However, all the samples subjected to NOS treatments failed the Korean warning standard of 1.2 mg L⁻¹ after 28 days of curing. All of the COS-PC treatments were successful meeting the Korean warning standard after 7 days of curing. However, the PC-only treatment failed to meet the Korean warning standard. Similarly, the CKD-only treatment was failed to meet the Korean warning standard after 7 days of curing. However, the COS-CKD treatment showed that when the COS content was greater than 20 wt%, less than 1 mg L⁻¹ of As leachability was obtained. Scanning electron microscopy–energy dispersive X-ray spectroscopy (SEM–EDX) showed needle-like and torpedo-like Ca–As phases in the COS-treated samples suggesting that As was strongly associated with Ca and O. X-ray absorption near edge structure (XANES) analyses confirmed that As(V) was prevalent in the tailings and that there were no changes in As speciation following NOS or COS treatment.     

Characterizing lipid biomarkers in methanotrophic communities of gas hydrate-bearing sediments in the Sea of Okhotsk

We studied specific lipid biomarkers of archaea and bacteria, that are associated with the anaerobic oxidation of methane (AOM) in a cold seep environment as well as the origin of sedimentary organic matter on the continental slope off NE Sakhalin in the Sea of Okhotsk. The organic geochemical parameters demonstrated that most of the sedimentary organic matter containing hydrate layers could be derived from marine phytoplankton and bacteria, except for a station (LV39-29H) which was remarkably affected by terrestrial vascular plant. Specific methanotrophic archaea biomarkers was vertically detected in hydrate-bearing cores (LV39-40H), coinciding with the negative excursion of the δ¹³C_org at core depths of 90–100 cm below the seafloor. These results suggest that methane provided from gas hydrates are already available substrates for microbes thriving in this sediment depth. In addition, the stable isotope mass balance method revealed that approximately 2.77–3.41% of the total organic carbon (or 0.036–0.044% dry weight sediment) was generated by the activity of the AOM consortium in the corresponding depth of core LV39-40H. On the other hand, the heavier δ¹³C values of archaeol in the gas hydrate stability zone may allow ongoing methanogenesis in deeper sediment depth.     

How do weather characteristics change in a warming climate?

The possible change in the characteristics of weather in the future should be considered as important as the mean climate change because the increasing risk of extremes is related to the variability on daily time scales. The weather characteristics can be represented by the climatological mean interdiurnal (day-to-day) variability (MIDV). This paper first assessed the phase five of the Coupled Model Intercomparison Project coupled climate models’ capability to represent MIDV for the surface maximum and minimum temperature, surface wind speed and precipitation under the present climate condition. Based on the assessment, we selected three best models for projecting future change. We found that the future changes in MIDV are characterized by: (a) a marked reduction in surface maximum and minimum temperature over high latitudes during the cold season; (b) a stronger reduction in the surface minimum temperature than in the maximum temperature; (c) a reduction in surface wind speed over large parts of lands in Northern Hemisphere (NH) during NH spring; (d) a noticeable increase in precipitation in NH mid-high latitudes in NH spring and winter, and in particular over East Asia throughout most of the year.     

Late Pliocene to Quaternary sedimentary facies and stratigraphy of shallow-water contourite deposits in the Hupo Basin,East Sea of Korea

Marine Geophysical Research - This study entails the characterization of the depositional environment of the Hupo Basin shelf. By means of sedimentary structure analysis, grain size, textures,...     

Current Structure and Volume Transport in the Jeju Strait Observed for a Year with Multiple ADCP Moorings

Ocean Science Journal - The seasonal and spatial variation of the current structure and volume transport across the Jeju Strait (JS) is described based on an analysis of the data from five bottom...     

Seasonal changes in camera-based indices from an open canopy black spruce forest in Alaska,and comparison with indices from a closed canopy evergreen coniferous forest in Japan

Evaluation of the carbon, water, and energy balances in evergreen coniferous forests requires accurate in situ and satellite data regarding their spatio-temporal dynamics. Daily digital camera images can be used to determine the relationships among phenology, gross primary productivity (GPP), and meteorological parameters, and to ground-truth satellite observations. In this study, we examine the relationship between seasonal variations in camera-based canopy surface indices and eddy-covariance-based GPP derived from field studies in an Alaskan open canopy black spruce forest and in a Japanese closed canopy cedar forest. The ratio of the green digital number to the total digital number, hue, and GPP showed a bell-shaped seasonal profile at both sites. Canopy surface images for the black spruce forest and cedar forest mainly detected seasonal changes in vegetation on the floor of the forest and in the tree canopy, respectively. In contrast, the seasonal cycles of the ratios of the red and blue digital numbers to the total digital numbers differed between the two sites, possibly due to differences in forest structure and leaf color. These results suggest that forest structural characteristics, such as canopy openness and seasonal forest-floor changes, should be considered during continuous observations of phenology in evergreen coniferous forests.     

Characteristics of evapotranspiration from a permafrost black spruce forest in interior Alaska

Here, the year 2011 characteristics of evapotranspiration and the energy budget of a black spruce forest underlain by permafrost in interior Alaska were explored. Energy balance was nearly closed during summer, and the mean value of the daily energy balance ratio (the ratio of turbulent energy fluxes to available energy) from June to August was 1.00, though a large energy balance deficit was observed in the spring. Such a deficit was explained partly by the energy consumed by snowmelt. Ground heat flux played an important role in the energy balance, explaining 26.5% of net radiation during summer. The mean daily evapotranspiration of this forest during summer was 1.37 mm day^?1 – considered typical for boreal forests. The annual evapotranspiration and sublimation yielded 207.3 mm year^?1, a value much smaller than the annual precipitation. Sublimation accounted for 8.8% (18.2 mm year^?1) of the annual evapotranspiration and sublimation; thus, the sublimation is not negligible in the annual water balance in boreal forests. The daytime average decoupling coefficient was very small, and the mean value was 0.05 during summer. Thus, evapotranspiration from this forest was mostly explained by the component from the dryness of the air, resulting from the aerodynamically rough surface of this forest.