Removal of water‐surface reflection effects with a temporal minimum filter for UAV‐based shallow‐water photogrammetry

The recent development of structure‐from‐motion (SfM) and multi‐view stereo (MVS) photogrammetry techniques has enabled semi‐automatic high‐resolution bathymetry using aerial images taken by consumer‐grade digital cameras mounted on unmanned aerial vehicles (UAVs). However, the applicability of these techniques is sometimes limited by sun and sky reflections at the water surface, which render the point‐cloud density and accuracy insufficient. In this research, we present a new imaging technique to suppress the effect of these water‐surface reflections. In this technique, we order a drone to take a short video instead of a still picture at each waypoint. We then apply a temporal minimum filter to the video. This filter extracts the smallest RGB values in all the video frames for each pixel, and composes an image with greatly reduced reflection effects. To assess the performance of this technique, we applied it at three small shallow‐water sites. Specifically, we evaluated the effect of the technique on the point cloud density and the accuracy and precision of the photogrammetry. The results showed that the proposed technique achieved a far denser point cloud than the case in which a randomly chosen frame was used for each waypoint, and also showed better overall accuracy and precision in estimating water‐bottom elevation. The effectiveness of this new technique should depend on the surface wave state and sky radiance distribution, and this dependence, as well as the applicability to large areas, should be investigated in future research. Copyright © 2018 John Wiley & Sons, Ltd.     

Bottom pressure change associated with the 2004–2005 large meander of the Kuroshio south of Japan

A large meander of the Kuroshio was generated in the region off the southern coast of Japan in August 2004 and continued until approximately July 2005. The formation and decay of the large-meander (LM) path was observed by bottom pressure (BP) sensors installed on inverted echo sounders (PIESs) and a seismic observing system off Shikoku. The variation in BP was examined focusing on the development, persistence, and decay of the LM path. The BP was found to be depressed associated with a Kuroshio path disturbance, called a small meander, and this BP depression led the sea surface height (SSH) depression by up to approximately two months. The temporal phase shift between the sea surface and deep disturbances was significantly greater than those of other small meanders that did not develop into large meanders. After the formation of the LM path, the BP beneath the Kuroshio increased with a lag of approximately two months behind the SSH elevation along with the upward displacement of the main thermocline. The increase in BP is associated with that of the positive southward BP gradient anomaly, i.e., the eastward deep Kuroshio current anomaly, which suggests an enhancement of the topographic steering and stability of the LM path. This is consistent with the fact that no small meanders occurred in the early LM period from late July 2004 to late January 2005.     

Long-term variability of the Kuroshio path south of Japan

This study investigates the long-term variability of the Kuroshio path south of Japan. Sensitivity experiments using a data-assimilative model suggest that the duration of the large meander (LM) strongly depends on the Kuroshio transport; specifically, low transport leads to a long duration of the LM. Actually, we find a good correlation between the duration of the past LMs and the Sverdrup transport estimated by a wind-driven linear baroclinic vorticity model. Then we explore favorable conditions for the LM and find a close relationship between the Kuroshio Extension (KE) state and the LM. That is, a precondition for the LM that the Kuroshio path on the Izu Ridge is fixed at a deep channel located around 34°N is achieved during a stable KE state. In addition, westward propagating signals with negative anomalies in the Kuroshio region and high sea-surface height (SSH) state east of Taiwan are key for generation of a small meander southeast of Kyushu that triggers a subsequent LM. The signals related to the above conditions change the upstream Kuroshio transport and velocity, which are consistent with features indicated by the former observational studies. Using reanalysis data, we construct long-time series of indices for the three conditions, which explain well the past LMs. The indices suggest that long-term non-LM states around 1970 and in the 1990s were attributed to a low-SSH state east of Taiwan and an unstable KE state, respectively.     

Barrier Layer and Relevant Variability of the Salinity Field in the Equatorial Pacific Estimated in an Ocean Reanalysis Experiment

This paper investigates the feasibility of an ocean data assimilation system to analyze the salinity variability associated with the barrier layer in the equatorial Pacific. In order to validate reproducibility of the temperature and salinity fields, we perform an assimilation run where some temperature and salinity observations by TRITON buoys and Argo floats are withheld. The assimilation run reproduces interannual variability of salinity in the equatorial Pacific exhibited in the data that are withheld. Statistics shows that salinity values and variations in the assimilation run are closer to the data than the climatology and in the model free run. We also confirm that zonal currents in the equatorial Pacific in the reanalysis, where all available temperature and salinity data are assimilated, are consistent with an observation-based mapping and the data of the Acoustic Doppler Current Profiler mounted on TAO buoys. Variability of the barrier layer and relevant salinity field in the reanalysis is consistent with former studies. A thick barrier layer area generally exists west of the equatorial salinity front and is displaced zonally with the migration of the front in the response to El Niño-Southern Oscillation, although the area moved to the east over the front in the 1997 El Niño. It is confirmed that the barrier layer thickness is closely correlated with the near-surface temperature in the equatorial Pacific.     

Effects of bottom bracings on torsional dynamic characteristics of horizontally curved twin I-girder bridges with different curvatures

Curved twin I-girder bridges (CTIGBs) have low torsional stiffness that makes them vulnerable to dynamic loads.This study investigates the effects of bottom bracings on the torsional dynamic characteri...     

Effect of ocean acidification on coastal phytoplankton composition and accompanying organic nitrogen production

The effect of ocean acidification, caused by the increase in pCO₂ in seawater, on phytoplankton population and on related organic nitrogen production was experimentally examined by use of a natural coastal microbial population. pCO₂ and pH were controlled by aeration with air in which pCO₂ was at the current level (control), for which ambient air was used, and with air in which pCO₂ was ??800?? and ??1200?? ppm, in 500-L culture vessels. The experiment was continued for 15?days after addition of the inorganic nutrients such as nitrate, phosphate, and silicate. During most of the experimental period, a minor increase in phytoplankton biomass was noted, probably because of low irradiance, an increase in phytoplankton biomass was observed at the end of the experiment. Flow cytometric and microscopic observations revealed that this increase was because of Chrysochromulina sp. (Haptophyceae). The growth of Chrysochromulina sp. was most obvious in the control vessel, and tended to be obscured by increasing pCO₂ (decrease in pH), indicating the possibility that ocean acidification inhibits the growth of specific phytoplankton groups, for example Chrysochromulina sp. Production of particulate organic nitrogen (PON), determined by the ¹⁵N tracer method, also diminished under acidified conditions compared with that at the current level.     

Holocene paleolimnological changes in Lake Skallen Oike in the Syowa Station area of Antarctica inferred from organic components in a sediment core (Sk4C-02)

Antarctic climate changes influence environmental changes at both regional and local scales. Here we report Holocene paleolimnological changes in lake sediment core Sk4C-02 (length 378.0 cm) from Lake Skallen Oike in the Soya Kaigan region of East Antarctica inferred from analyses of sedimentary facies, a range of organic components, isotope ratios of organic carbon and nitrogen, and carbon-14 dating by Tandetron accelerator mass spectrometry. The sediment core was composed of clayish mud (378.0–152.5 cm) overlain by organic sediments (152.5 cm-surface). The age of the surface and the core bottom were 150 (AD1950-1640) and ca. 7,030 ± 73 calibrated years before present (cal BP), respectively, and the mean sedimentation rate was estimated to be 0.55 mm/year. Multi-proxy analyses revealed that the principal environmental change in the core is a transition from marine to lacustrine environments which occurred at a depth of 152.5 cm (ca. 3,590 cal BP). This was caused by relative sea level change brought about by ongoing retreat of glaciers during the mid-Holocene warming of Antarctica, and ongoing isostatic uplift which outpaced changes in global (eustatic) sea level. The mean isostatic uplift rate was calculated to be 2.8 mm/year. The coastal marine period (378.0–152.5 cm, ca. 7,030–3,590 cal BP) was characterized by low biological production with the predominance of diatoms. During the transition period from marine to freshwater conditions (152.5-approximately 135 cm, ca. 3,590–3,290 cal BP) the lake was stratified with marine water overlain by freshwater, with a chemocline and an anoxic (sulfidic) layer in the bottom of the photic zone. Green sulfur bacteria and Cryptophyta were the major photosynthetic organisms. The Cryptophyta appeared to be tolerant of the moderate salinity and stratified water conditions. The lacustrine period (approximately 135 cm-surface, ca. 3,290 cal BP-present) was characterized by high biological production by green algae (e.g. Comarium clepsydra and Oedegonium spp.) with some contributions from cyanobacteria and diatoms. Biological production during this period was 8.7 times higher than during the coastal marine period.     

Detailed measurements of thickness and grain size of a widespread onshore tsunami deposit in Phang‐nga Province,southwestern Thailand

Measurements of thickness and grain size along flow‐parallel transects across onshore deposits of the 2004 Indian Ocean tsunami revealed macroscopic horizontal variations and provided new insights into tsunami sedimentation. The tsunami caused severe erosion of beaches, river mouths, and the shallow seafloor along the coast of southwestern Thailand and supplied sufficient sediment to deposit a kilometer‐wide blanket of sand on the land surface. The tsunami deposits generally fine landward with some fluctuations caused by local entrainment and settlement of sediments. Sediments of medium and fine sand are restricted to a few hundreds of meters inland from their source, whereas finer grained sediments were suspended longer and deposited 1 km or more inland. Although the thickness of the tsunami deposits is strongly influenced by local topography, they generally thin landward. In areas of low‐relief topography, the rate of landward thinning is exponential and reflects the dominance of sediment supply to nearshore areas over that to areas farther inland.     

Evolution of Mount Fuji,Japan: Inference from drilling into the subaerial oldest volcano,pre‐Komitake

A buried, old volcanic body (pre‐Komitake Volcano) was discovered during drilling into the northeastern flank of Mount Fuji. The pre‐Komitake Volcano is characterized by hornblende‐bearing andesite and dacite, in contrast to the porphyritic basaltic rocks of Komitake Volcano and to the olivine‐bearing basaltic rocks of Fuji Volcano. K‐Ar age determinations and geological analysis of drilling cores suggest that the pre‐Komitake Volcano began with effusion of basaltic lava flows around 260 ka and ended with explosive eruptions of basaltic andesite and dacite magma around 160 ka. After deposition of a thin soil layer on the pre‐Komitake volcanic rocks, successive effusions of lava flows occurred at Komitake Volcano until 100 ka. Explosive eruptions of Fuji Volcano followed shortly after the activity of Komitake. The long‐term eruption rate of about 3 km³/ka or more for Fuji Volcano is much higher than that estimated for pre‐Komitake and Komitake. The chemical variation within Fuji Volcano, represented by an increase in incompatible elements at nearly constant SiO₂, differs from that within pre‐Komitake and other volcanoes in the northern Izu‐Bonin arc, where incompatible elements increase with increasing SiO₂. These changes in the volcanism in Mount Fuji may have occurred due to a change in regional tectonics around 150 ka, although this remains unproven.     

Impact of flood events on macrobenthic community structure on an intertidal flat developing in the Ohta River Estuary

We investigated the effects of river floods on the macrobenthic community of the intertidal flat in the Ohta River Estuary, Japan, from 2005 to 2010. Sediment erosion by flood events ranged from about 2–3 cm to 12 cm, and the salinity dropped to 0‰ even during low-intensity flood events. Cluster analysis of the macrobenthic population showed that the community structure was controlled by the physical disturbance, decreased salinity, or both. The opportunistic polychaete Capitella sp. was the most dominant species in all clusters, and populations of the long-lived polychaete Ceratonereis erythraeensis increased in years with stable flow and almost disappeared in years with intense flooding. The bivalve Musculista senhousia was also an important opportunistic species that formed mats in summer of the stable years and influenced the structure of the macrobenthic community. Our results demonstrate the substantial effects of flood events on the macrobenthic community structure.