Interactions of uranium with bacteria and kaolinite clay

We assessed the accumulation of uranium (VI) by a bacterium, Bacillus subtilis, suspended in a slurry of kaolinite clay, to elucidate the role of microbes on the mobility of U(VI). Various mixtures of bacteria and the koalinite were exposed to solutions of 8 × 10^− 6 M- and 4 × 10^− 4 M-U(VI) in 0.01 M NaCl at pH 4.7. After 48 h, the mixtures were separated from the solutions by centrifugation, and treated with a 1 M CH₃COOK for 24 h to determine the associations of U within the mixture. The mixture exposed to 4 × 10^− 4 M U was analyzed by transmission electron microscope (TEM) equipped with EDS. The accumulation of U by the mixture increased with an increase in the amount of B. subtilis cells present at both U concentrations. Treatment of kaolinite with CH₃COOK, removed approximately 80% of the associated uranium. However, in the presence of B. subtilis the amount of U removed was much less. TEM–EDS analysis confirmed that most of the U removed from solution was associated with B. subtilis. XANES analysis of the oxidation state of uranium associated with B. subtilis, kaolinite, and with the mixture containing both revealed that it was present as U(VI). These results suggest that the bacteria have a higher affinity for U than the kaolinite clay mineral under the experimental conditions tested, and that they can immobilize significant amount of uranium.     

Petrochemistry of Volcanic Rocks in the Hishikari Mining Area of Southern Japan, with Implications for the Relative Contribution of Lower Crust and Mantle-derived Basalt

Abstract. This study presents the petrographical, mineralogical, and geochemical characteristics of Late Pliocene‐Pleistocene volcanic rocks distributed in the Hishikari gold mining area of southern Kyushu, Japan, and discusses their origin and evolution. The Hishikari volcanic rocks (HVR), on the basis of age and chemical compositions, are divided into the Kurosonsan (2.4–1.0 Ma) and Shishimano (1.7–0.5 Ma) Groups, which occur in the northern and southern part of the area, respectively. Each group is composed of three andesites and one rhyodacite. HVR are characterized by high concentrations of incompatible elements compared with other volcanic rocks in southern Kyushu, and have low Sr/Nd and high Th/U, Th/Pb, and U/Pb ratios compared with typical subduction‐related arc volcanic rocks. Modal and whole‐rock compositions of the HVR change systematically with the age of the rocks. Mafic mineral and augite/hypersthene ratios of the andesites decrease with decreasing age in the Kurosonsan Group, whereas in the Shishimano Group, these ratios are higher in the youngest andesite. Similarly, major and trace element compositions of the younger andesites in the former group are enriched in felsic components, whereas in the latter group the youngest andesite is more mafic than older andesites. Moreover, the crystallization temperature of phenocryst minerals decreases with younger age in the former group, whereas the opposite trend is seen in the latter group. Another significant feature is that rhyodacite in the Shishimano Group is enriched in felsic minerals and incompatible elements, and exhibits higher crystallization temperatures of phenocryst minerals than the rhyodacite of the Kurosonsan Group. Geochemical attributes of the HVR and other volcanic rocks in southern Kyushu indicate that a lower subcontinental crust, characterized by so‐called EMI‐type Sr‐Nd and DUPAL anomaly‐like Pb isotopic compositions, is distributed beneath the upper to middle crust of the Shimanto Supergroup. The HVR would be more enriched in felsic materials derived from the lower crust by high‐alumina basaltic magma from the mantle than volcanic rocks in other areas of southern Kyushu. The Kurosonsan Group advanced the degree of the lower crust contribution with decreasing age from 51 %, through 61 and 66 % to 77 %. In the Shishimano Group, the younger rhyodacite and andesite are derived from hotter magmas with smaller amounts of lower crust component (58 and 57 %) than the older two andesites (65 % and 68 %). We suggest that the Shishimano rhyodacite, which is considered to be responsible for gold mineralization, was formed by large degree of fractional crystallization of hot basaltic andesite magma with less lower crustal component.     

Grain size of the surface regolith of asteroid 4 Vesta estimated from its reflectance spectrum in comparison with HED meteorites

Abstract— The grain-size distribution of the regolith of asteroid 4 Vesta has been estimated by comparing its reflectance spectra (0.3–2.6 μm) with those of HED meteorites. The finest grain-size separate (<25 μm) of a particular howardite has a reflectance spectrum most similar to Vesta's. In order to better simulate Vesta's surface mineralogy, reflectance spectra of those finest HED meteorite powders were linearly combined, and Vesta's spectrum was scaled for the best fit between them. Both the albedo and the shape of reflectance spectrum of Vesta were well reproduced by regional mixtures of the finest (<25 μm) powders of HED meteorites. The result suggests the heterogeneity of Vesta's surface and provides an estimate of the visible reflectance of Vesta that is close to its IRAS albedo. Thus, this suggests that fine grains can be generated and retained by relatively small bodies (Vesta is approximately 500 km in diameter).     

Numerical Study of Formation of Dichothermal Water in the Bering Sea

A one-dimensional numerical model with a level-2.5 turbulent closure scheme to provide vertical mixing coefficients has been used to investigate the process by which the dichothermal water is formed in the Bering Sea, the density of which is about 26.6 sigma-theta. The water column to be simulated is assumed to move along a predetermined path. That is, the present model is of the Lagrangian-type. Surface boundary conditions are given using the climatologies of heat, freshwater and momentum fluxes. In order to obtain a plausible moving speed of the water column along the path, pre-liminary experiments were done using the surface fluxes in the central part of the Bering Sea for the initial temperature and salinity profiles at the entrance of the Sea. As a result, it was found that the temperature minimum layer, i.e., the dichothermal water with temperature similar to the climatology at the exit of the Bering Sea, was formed after about two years of integration. Based on the result, the movement speed of the water column along the path was set as 4.5 cm/s in the standard run. It was found that this model could plausibly reproduce the subsurface temperature minimum layer. That is, the dichothermal water was formed in the winter mixed layer process in the Bering Sea. The existence of the subsurface halocline (pycnocline) prohibited the deeper penetration of the winter mixed layer, and therefore water with a temperature colder than that under the mixed layer was formed in the mixed layer due to wintertime surface cooling. In the warming season this water remains as the subsurface temperature minimum layer between the upper seasonal thermocline and the lower halocline. This revised version was published online in August 2006 with corrections to the Cover Date.     

Reliability of ADCP data detided with a numerical model on the East China Sea shelf

The reliability of a numerical tide model for detiding acoustic Doppler current profiler (ADCP) data is examined on the East China Sea shelf. The process is adopted for the ADCP data obtained on 12–13 May 2003. The ocean model accompanied by the most precise harmonic constants available to public is used to compute external tides. The root mean square difference is less than 10 cm/s between the detided currents and those using the least squares method, and so the detiding process using the numerical model is available to detect the East China Sea shelf circulation faster than this speed.     

Winter Mixed Layer and Formation of Dichothermal Water in the Bering Sea

The temperature minimum layer, called “dichothermal water”, is a characteristic feature of the North Pacific subarctic gyre. In particular, dichothermal water having a density of approximately 26.6 sigma-theta (σ_θ), which corresponds to the densest water outcropping in winter in the North Pacific, is seen in the Bering Sea. In order to clarify the water properties, and the area in which and the process by which the dichothermal water is formed, a new seasonal mean gridded climatological dataset with a fine resolution for the Bering Sea and adjacent seas has been prepared using historically accumulated hydrographic data. Although the waters of the Alaskan Stream have temperature minimum layers, their temperature inversions are very weak in climatologies and the core densities of the temperature minimum layers are much lighter than 26.6σ_θ. On the other hand, in the Bering Sea one can see the robust structure of temperature minimum layers, the core density of the dichothermal water being around 26.6σ_θ. In addition, it has been found that the properties of the dichothermal water observed in the warming season are almost the same as those in the winter mixed layer. That is, the dichothermal waters are formed in the winter mixed layer in the Bering Sea. Since these waters are found in the Kamchatka Strait, i.e., the main exit of the Bering Sea waters, it can be supposed that the dichothermal waters are exported from the Bering Sea to the Pacific Ocean by the Kamchatka Current. This revised version was published online in July 2006 with corrections to the Cover Date.     

Twin formation in hematite during dehydration of goethite

Twin formation in hematite during dehydration was investigated using X-ray diffraction, electron diffraction, and high-resolution transmission electron microscopy (TEM). When synthetic goethite was heated at different temperatures between 100 and 800 °C, a phase transformation occurred at temperatures above 250 °C. The electron diffraction patterns showed that the single-crystalline goethite with a growth direction of [001]_G was transformed into hematite with a growth direction of [100]_H. Two non-equivalent structures emerged in hematite after dehydration, with twin boundaries at the interface between the two variants. As the temperature was increased, crystal growth occurred. At 800 °C, the majority of the twin boundaries disappeared; however, some hematite particles remained in the twinned variant. The electron diffraction patterns and high-resolution TEM observations indicated that the twin boundaries consisted of crystallographically equivalent prismatic (100) (010), and (1\(\bar{1}\)0) planes. According to the total energy calculations based on spin-polarized density functional theory, the twin boundary of prismatic (100) screw had small interfacial energy (0.24 J/m²). Owing to this low interfacial energy, the prismatic (100) screw interface remained after higher-temperature treatment at 800 °C.     

Cryptotephra detection using high-resolution trace-element analysis of Holocene marine sediments, southwest Japan

Detection techniques for invisible tephra, known as cryptotephra, have been exploited to construct precise and high-resolution correlations for a broad range of sedimentary sequences. We demonstrate that continuous trace-element profiles are an effective means for detecting probable positions of distal cryptotephra in Holocene hemipelagic sediments. Instrumental neutron activation analyses were performed on specimens of bulk sediments from five piston and gravity cores (water depths: 300-1500 m) taken from the southern Japan/East Sea. The down-core variations in the Ta/Sc ratio identify the positions of one to three alkaline cryptotephra in four of these cores. The Cr/Sc profiles show the position of one rhyolitic cryptotephra in three of the cores. The existence of tephra-derived components (glass ± crystals) was confirmed by microscopic observation, SEM-EPMA analysis and refractive index measurement on grains extracted from these layers. Based on microscopic observation and the stratigraphic correlations between cores, we identified eruption ages of the cryptotephras at 6.3, 7.5 and 9.3 ¹⁴C kyr BP, and two source volcanoes around 800 and 400 km from the study area.The tephra layers visible to the naked eye contained volcanic grains coarser than 200 μm, and the alkaline and rhyolitic tephra component comprised >20% and >33% of the sediment on weight basis, respectively. In contrast, the range of particle sizes of the cryptotephras detected in this study is finer than 125 μm, and almost all of the glass shards were finer than 40 μm. The alkaline and rhyolitic cryptotephras made up only 2-17% and 22-24%, respectively, of the sediment on weigh basis. The high sensitivity of this method stems from the significant difference in trace-element contents between the tephras and enclosing hemipelagic sediments in the core. Alkaline U-Oki tephra was enriched in Ta by one order of magnitude over that of the sediment, and depleted in Sc by one order. The rhyolitic tephra, K-Ah, was depleted by about one order in Cr relative to that of enclosing the sediment. The differences in chemical composition between within-plate alkaline tephras and hemipelagic sediments are usually so large that trace-element geochemical method is likely to be useful for alkaline cryptotephra detection in other areas with similar tectonic characteristics.     

Evaluation of radiation-damage halos in quartz by cathodoluminescence as a geochronological tool

Detailed quantitative cathodoluminescence (CL) imaging analysis was carried out for radiation-damage halos observed by CL (CL halo) created in natural quartz by implantation of 4 MeV He⁺ ions. The band of CL halo was approximately 14 μm in width and was constant for any He⁺ ion dose. The width of the halo is consistent with the theoretical range of ⁴He ions in quartz. A quantitative response of CL intensity to He⁺ ion dose was obtained, leading to the application of CL halos to geodosimetrical use. The CL intensity increases exponentially in the luminescent band from the implantation surface to the inside, until it reaches a maximum at 14 μm depth, with a rapid decrease beyond this point. This result is as predicted by Bragg's law, although we find some differences between the CL intensity and the theoretical stopping power.