Revisiting the morphological method in two-dimensions to quantify bed-material transport in braided rivers

Research in the 1990s showed that bed-material transport rates could be estimated at the reach scale in both one-dimension and, over small spatial scales (10s of m), in two-dimensions. The limit on the latter was the spatial scale over which it was possible to obtain distributed data on morphological change. Here, we revisit the morphological method given progress in both topographical data acquisition and hydraulic modelling. The bed-material transport needed to conserve mass is calculated in both one and two dimensions for a 1600 m × 300 m Alpine braided river “laboratory”. High-resolution topographical data were acquired by laser scanning to quantify Digital Elevation Models (DEMs), and morphological changes caused by the flushing of the water intake were derived from repeated surveys. Based on DEMs of differences, 1D bed-material transport rates were calculated using the morphological method. Then, a 2D hydraulic model was combined with a topographic correction to route sediment through the network of braided channels and to obtain a spatially variable estimate of transport in both downstream and cross-stream directions. Monte Carlo simulation was applied to the routing model parameters, allowing identification of the most probable parameter values needed to minimize negative transport. The results show that within-section spatial compensation of erosion and deposition using the 1D treatment leads to substantial local errors in transport rate estimates, to a degree related to braiding intensity. Even though the 2D application showed that a large proportion of the total transport was actually concentrated into one main channel during the studied low flow event, the proportion of transport in secondary anabranches is substantial when the river starts braiding. Investigations of the effects of DEM resolution, competent flow duration and survey frequency related to ‘travelling bedload’ and sequential erosion-deposition emphasized the critical importance of careful data collection in the application of the morphological method. © 2019 John Wiley & Sons, Ltd.     

Flow resistance and hydraulic geometry in bedrock rivers with multiple roughness length scales

Many models of incision by bedrock rivers predict water depth and shear stress from discharge; conversely, palaeoflood discharge is sometimes reconstructed from flow depth markers in rock gorges. In both cases, assumptions are made about flow resistance. The depth–discharge relation in a bedrock river must depend on at least two roughness length scales (exposed rock and sediment cover) and possibly a third (sidewalls). A conceptually attractive way to model the depth–discharge relation in such situations is to partition the total shear stress and friction factor, but it is not obvious how to quantify the friction factor for rough walls in a way that can be used in incision process models. We show that a single flow resistance calculation using a spatially averaged roughness length scale closely approximates the partitioning of stress between sediment and rock, and between bed and walls, in idealized scenarios. Both approaches give closer fits to the measured depth–discharge relations in two small bedrock reaches than can be achieved using a fixed value of Manning's n or the Chézy friction factor. Sidewalls that are substantially rougher or smoother than the bed have a significant effect on the partitioning of shear stress between bed and sidewalls. More research is needed on how best to estimate roughness length scales from observable or measurable channel characteristics. © 2019 John Wiley & Sons, Ltd.     

Guidelines on the use of structure-from-motion photogrammetry in geomorphic research

As a topographic modelling technique, structure-from-motion (SfM) photogrammetry combines the utility of digital photogrammetry with a flexibility and ease of use derived from multi-view computer vision methods. In conjunction with the rapidly increasing availability of imagery, particularly from unmanned aerial vehicles, SfM photogrammetry represents a powerful tool for geomorphological research. However, to fully realize this potential, its application must be carefully underpinned by photogrammetric considerations, surveys should be reported in sufficient detail to be repeatable (if practical) and results appropriately assessed to understand fully the potential errors involved. To deliver these goals, robust survey and reporting must be supported through (i) using appropriate survey design, (ii) applying suitable statistics to identify systematic error (bias) and to estimate precision within results, and (iii) propagating uncertainty estimates into the final data products. © 2019 John Wiley & Sons, Ltd.     

Evolution of permafrost in China during the last 20 ka

The formation and evolution of permafrost in China during the last 20 ka were reconstructed on the basis of large amount of paleo-permafrost remains and paleo-periglacial evidence, as well as paleo-glacial landforms, paleo-flora and paleofauna records. The results indicate that, during the local Last Glacial Maximum(LLGM) or local Last Permafrost Maximum(LLPMax), the extent of permafrost of China reached 5.3×106-5.4×106 km2, or thrice that of today, but permafrost shrank to only0.80×106-0.85×106 km2, or 50% that of present, during the local Holocene Megathermal Period(LHMP), or the local Last Permafrost Minimum(LLPMin). On the basis of the dating of periglacial remains and their distributive features, the extent of permafrost in China was delineated for the two periods of LLGM(LLPMax) and LHMP(LLPMin), and the evolution of permafrost in China was divided into seven periods as follows:(1) LLGM in Late Pleistocene(ca. 20000 to 13000-10800 a BP)with extensive evidence for the presence of intensive ice-wedge expansion for outlining its LLPMax extent;(2) A period of dramatically changing climate during the early Holocene(10800 to 8500-7000 a BP) when permafrost remained relatively stable but with a general trend of shrinking areal extent;(3) The LHMP in the Mid-Holocene(8500-7000 to 4000-3000 a BP)when permafrost degraded intensively and extensively, and shrank to the LLPMin;(4) Neoglaciation during the late Holocene(4000-3000 to 1000 a BP, when permafrost again expanded;(5) Medieval Warming Period(MWP) in the late Holocene(1000-500 a BP) when permafrost was in a relative decline;(6) Little Ice Age(LIA) in the late Holocene(500-100 a BP), when permafrost relatively expanded, and;(7) Recent warming(during the 20 th century), when permafrost continuously degraded and still is degrading. The paleo-climate, geography and paleopermafrost extents and other features were reconstructed for each of these seven periods.     

Urban groundwater quality in sub-Saharan Africa: current status and implications for water security and public health

Groundwater resources are important sources of drinking water in Africa, and they are hugely important in sustaining urban livelihoods and supporting a diverse range of commercial and agricultural activities. Groundwater has an important role in improving health in sub-Saharan Africa (SSA). An estimated 250 million people (40% of the total) live in urban centres across SSA. SSA has experienced a rapid expansion in urban populations since the 1950s, with increased population densities as well as expanding geographical coverage. Estimates suggest that the urban population in SSA will double between 2000 and 2030. The quality status of shallow urban groundwater resources is often very poor due to inadequate waste management and source protection, and poses a significant health risk to users, while deeper borehole sources often provide an important source of good quality drinking water. Given the growth in future demand from this finite resource, as well as potential changes in future climate in this region, a detailed understanding of both water quantity and quality is required to use this resource sustainably. This paper provides a comprehensive assessment of the water quality status, both microbial and chemical, of urban groundwater in SSA across a range of hydrogeological terrains and different groundwater point types. Lower storage basement terrains, which underlie a significant proportion of urban centres in SSA, are particularly vulnerable to contamination. The relationship between mean nitrate concentration and intrinsic aquifer pollution risk is assessed for urban centres across SSA. Current knowledge gaps are identified and future research needs highlighted.     

Organohalogen contaminants and trace metals in North-East Atlantic porbeagle shark (Lamna nasus)

The North-East Atlantic porbeagle (Lamna nasus) population has declined dramatically over the last few decades and is currently classified as ‘Critically Endangered’. As long-lived, apex predators, they may be vulnerable to bioaccumulation of contaminants. In this study organohalogen compounds and trace elements were analysed in 12 specimens caught as incidental bycatch in commercial gillnet fisheries in the Celtic Sea in 2011. Levels of organohalogen contaminants were low or undetectable (summed CB and BDE concentrations 0.04–0.85 mg kg⁻¹ wet weight). A notably high Cd concentration (7.2 mg kg⁻¹ wet weight) was observed in one mature male, whereas the range observed in the other samples was much lower (0.04–0.26 mg kg⁻¹ wet weight). Hg and Pb concentrations were detected only in single animals, at 0.34 and 0.08 mg kg⁻¹ wet weight, respectively. These contaminant levels were low in comparison to other published studies for shark species.     

Mitigating systematic error in topographic models derived from UAV and ground‐based image networks

High resolution digital elevation models (DEMs) are increasingly produced from photographs acquired with consumer cameras, both from the ground and from unmanned aerial vehicles (UAVs). However, although such DEMs may achieve centimetric detail, they can also display systematic broad‐scale error that restricts their wider use. Such errors which, in typical UAV data are expressed as a vertical ‘doming’ of the surface, result from a combination of near‐parallel imaging directions and inaccurate correction of radial lens distortion. Using simulations of multi‐image networks with near‐parallel viewing directions, we show that enabling camera self‐calibration as part of the bundle adjustment process inherently leads to erroneous radial distortion estimates and associated DEM error. This effect is relevant whether a traditional photogrammetric or newer structure‐from‐motion (SfM) approach is used, but errors are expected to be more pronounced in SfM‐based DEMs, for which use of control and check point measurements are typically more limited. Systematic DEM error can be significantly reduced by the additional capture and inclusion of oblique images in the image network; we provide practical flight plan solutions for fixed wing or rotor‐based UAVs that, in the absence of control points, can reduce DEM error by up to two orders of magnitude. The magnitude of doming error shows a linear relationship with radial distortion and we show how characterization of this relationship allows an improved distortion estimate and, hence, existing datasets to be optimally reprocessed. Although focussed on UAV surveying, our results are also relevant to ground‐based image capture. © 2014 The Authors. Earth Surface Processes and Landforms published by John Wiley & Sons Ltd.     

Atypical size selection of captive school prawns,Metapenaeus macleayi,by three recreational fishing gears in south‐eastern Australia

Three manipulative experiments were done to estimate the selectivity of conventional and new sizes and configurations of mesh for school prawns, Metapenaeus macleayi, in three south‐eastern Australian recreational fishing gears (haul, push, and scoop nets). The treatment meshes examined were: (1) conventional‐sized, diamond‐shaped mesh used in all gears (20 mm in scoop nets and 30 mm in push and haul nets); (2) 30 mm in scoop nets; and (3) 40‐mm diamond‐ and (4) 23‐mm square‐shaped mesh in all gears. In all experiments, known quantities of school prawns (6–24 mm carapace length (CL)) were placed in purpose‐built enclosures, monitored to ensure no experimental‐induced stress (as measured by changes in L‐lactate in their haemolymph) and the replicate treatments of the various gear configurations deployed. Escapees from the various treatment nets were collected from the enclosures using fine‐meshed nets. Logistic selection curves were derived for all treatment nets and specific comparisons made within and among gears. All nets had 50% retention lengths (L₅₀) comparable to other penaeid‐catching gears with similar mesh sizes, but most had selection ranges (SRs) that were atypically inflated. The large SRs were attributed to a combination of factors that included the mesh geometry and towing speed of the gears and the behaviour of school prawns. The 20‐mm scoop net had the smallest selection parameters, retaining >99% of individuals larger than 13 mm CL. Mesh size in this gear would need to be increased to at least 30 mm to allow some maturing prawns (>18 mm CL) to escape.     

Biodiversity in Hudson River shore zones: influence of shoreline type and physical structure

The shore zones of the Hudson River, like those of many developed waterways, are highly varied, containing a mix of seminatural and highly engineered shores. Our goal was to document the biodiversity supported by different kinds of shore zones in the Hudson. We chose six common types of shore zones, three of them ??natural?? (sand, unconsolidated rock, and bedrock), and three of them engineered (riprap, cribbing, and bulkheads). We measured selected physical characteristics (shore zone width, exposure, substrate roughness and grain size, shoreline complexity) of three examples of each of these shore types, and also sampled communities of terrestrial plants, fishes, and aquatic and terrestrial invertebrates. Community composition of most taxa differed across shore types, and frequently differed between wide, sheltered shores and narrow, exposed shores. Alien plant species were especially well represented along engineered shores. Nevertheless, a great deal of variation in biological communities was not explained by our six-class categorization of shore zones or the physical variables that we measured. No single shore type supported the highest values of all kinds of biodiversity, but engineered shore zones (especially cribbing and bulkheads) tended to have less desirable biodiversity characteristics than ??natural?? shore zones.