Fish,Macroinvertebrate and Epifaunal Communities in Shallow Coastal Lagoons with Varying Seagrass Cover of the Northern Gulf of Mexico

Coastal lagoons are ubiquitous along coastlines worldwide. Here, we compare the abundance of epifauna, seagrass-associated macroinvertebrates, and small fish across a gradient of seagrass cover in shallow coastal lagoons of the northern Gulf of Mexico. Two of the lagoons had little or no seagrass cover (0–18.8 %), and four had high cover (83.8–97.5 %). All of the lagoons were partially covered with fringing marsh. We hypothesized that, due to habitat redundancy between seagrass beds and fringing marshes, seagrass-associated fish and macroinvertebrates would not be largely reduced despite the large differences in seagrass cover among the lagoons. Our results support this hypothesis. For most sampling dates, we did not find significant differences in fish and macroinvertebrate abundance among the lagoons and, when we did, several highly vegetated lagoons did not have larger abundances than sparsely vegetated lagoons. The extreme shallowness of the lagoons studied (<1 m) may also provide further protection from large predatory fishes in the absence of seagrasses. Our results also suggest that marsh detritus, by providing habitat for epifauna and helping maintain prey availability, may further temper reductions in seagrass-associated fishes and macroinvertebrates following seagrass decline. The results highlight the importance of marsh-bordered, shallow lagoons as habitat for small fish and macroinvertebrates regardless of seagrass cover. This study contributes to the characterization of habitat redundancy in coastal ecosystems and pinpoints the importance of considering all habitats in concert for the proper understanding and management of coastal ecosystems.     

The sedimentary and tectonic evolution of the Amur River and North Sakhalin Basin: new evidence from seismic stratigraphy and Neogene–Recent sediment budgets

The North Sakhalin Basin in the western Sea of Okhotsk has been the main site of sedimentation from the Amur River since the Early Miocene. In this article, we present regional seismic reflection data and a Neogene–Recent sediment budget to constrain the evolution of the basin and its sedimentary fill, and consider the implications for sediment flux from the Amur River, in particular testing models of continental‐scale Neogene drainage capture. The Amur‐derived basin‐fill history can be divided into five distinct stages: the first Amur‐derived sediments (>21–16.5 Ma) were deposited during a period of transtension along the Sakhalin‐Hokkaido Shear Zone, with moderately high sediment flux to the basin (71 Mt year^?1). The second stage sequence (16.5–10.4 Ma) was deposited following the cessation of transtension, and was characterised by a significant reduction in sediment flux (24 Mt year^?1) and widespread retrogradation of deltaic sediments. The third (10.4–5.3 Ma) and fourth (5.3–2.5 Ma) stages were characterised by progradation of deltaic sediments and an associated increase in sediment flux (48–60 Mt year^?1) to the basin. Significant uplift associated with regional transpression started during this time in southeastern Sakhalin, but the north‐eastward propagating strain did not reach the NE shelf of Sakhalin until the Pleistocene (<2.5 Ma). This uplift event, still ongoing today, resulted in recycling of older deltaic sediments from the island of Sakhalin, and contributed to a substantially increased total sediment flux to the adjacent basinal areas (165 Mt year^?1). Adjusted rates to discount these local erosional products (117 Mt year^?1) imply an Amur catchment‐wide increase in denudation rates during the Late Pliocene–Pleistocene; however, this was likely a result of global climatic and eustatic effects, combined with tectonic processes within the Amur catchment and possibly a smaller drainage capture event by the Sungari tributary, rather than continental‐scale drainage capture involving the entire upper Amur catchment.     

Evaluation of coseismic landslide hazard on the proposed Haast-Hollyford Highway,South Island,New Zealand

Coseismic landsliding presents a major hazard to infrastructure in mountains during large earthquakes. This is particularly true for road networks, as historically coseismic landsliding has resulted in road losses larger than those due to ground shaking. Assessing the exposure of current and planned highway links to coseismic landsliding for future earthquake scenarios is therefore vital for disaster risk reduction. This study presents a method to evaluate the exposure of critical infrastructure to landsliding from scenario earthquakes from an underlying quantitative landslide hazard assessment. The method is applied to a proposed new highway link in South Island, New Zealand, for a scenario Alpine Fault earthquake and compared to the current network. Exposure (the likelihood of a network being affected by one or more landslides) is evaluated from a regional-scale coseismic landslide hazard model and assessed on a relative basis from 0 to 1. The results show that the proposed Haast-Hollyford Highway (HHH) would be highly exposed to coseismic landsliding with at least 30–40?km likely to be badly affected (the Simonin Pass route being the worse affected of the two routes). In the current South Island State Highway network, the HHH would be the link most exposed to landsliding and would increase the total network exposure by 50–70% despite increasing the total road length by just 3%. The present work is intended to provide an effective method to assess coseismic landslide hazard of infrastructure in mountains with seismic hazard, and potentially identify mitigation options and critical network segments.     

Cannibalistic viruses in the aquatic environment: role of virophages in manipulating microbial communities

The ecological role of viruses in aquatic environments is gaining interest due to their abundance and overall diversity. Much focus has been on bacteriophages since they were found to play an important role in the diversification and sustainment at both the micro- and macro-scale. However, the discovery of virophages coexisting with giant viruses in a diverse set of eukaryotic hosts has recently gained attention. Virophages are small double-stranded DNA viruses found parasitizing giant viruses of eukaryotes. Since the discovery of the first virophage (Sputnik) many virophage signatures have been detected from a variety of environmental samples with specific infection cycles. In addition, these parasites display important roles in equilibrating microbial biomass, nutrient cycling and population dynamics. Moreover, virophage-induced evolution between giant viruses and their hosts have also been described. Considering the ongoing discovery of virophages and their dynamics in aquatic ecosystems, this review intends to provide an update of the virophage signatures identified to date, also tending to provide insight on the mechanisms of coinfection as well as their role as agents of biodiversity and nutrient cyclers in water environments.     

Great South Bay After Sandy: Changes in Circulation and Flushing due to New Inlet

The coastal ocean model FVCOM is applied to quantify the changes in circulation, flushing, and exposure time in Great South Bay, New York, after Superstorm Sandy breached the barrier island in 2012. Since then, the lagoon system is connected to the Atlantic via five instead of four inlets. The model simulations are run on two high-resolution unstructured grids, one for the pre-breach configuration, one including the new inlet, with tidal-only forcing, and summer and winter forcing conditions. Despite its small cross-sectional size, the breach has a relatively large net inflow that leads to a strengthening of the along-bay through-flow in Great South Bay (GSB); the tidally driven volume transport in central GSB quadrupled. The seasonal forcing scenarios show that the southwesterly sea breeze in summer slows down the tidally driven flow, while the forcing conditions in winter are highly variable, and the circulation is dependent on wind direction and offshore sea level. Changes in flushing and exposure time associated with the modified transport patterns are evaluated using a Eulerian passive tracer technique. Results show that the new inlet produced a significant decrease in flushing time (approximately 35% reduction under summer wind conditions and 20% reduction under winter wind conditions). Maps of exposure time reflect the local changes in circulation and flushing.     

Textural and micro-analytical insights into mafic–felsic interactions during the Oruanui eruption,Taupo

Quenched juvenile mafic inclusions (enclaves) are an occasional but informative component in the deposits of large felsic eruptions. Typically, the groundmasses of these inclusions rapidly crystallize as the mafic magma is chilled against a more voluminous, cooler felsic host, providing a physical and chemical record of the nature and timing of mafic–felsic interactions. We examine mafic inclusions of two compositional lineages (tholeiitic and calc-alkaline) from deposits of the 25.4 ka Oruanui eruption (Taupo, New Zealand). 2-D quantitative textural data from analysis of back-scattered electron images reveal a marked diversity in the groundmass textures of the inclusions, including median crystal sizes (amphibole: 14–45 µm; plagioclase: 21–75 µm) and aspect ratios (amphibole: 1.7–4.2; plagioclase: 2.1–4.0), area number densities (amphibole: 122–2660 mm^?2; plagioclase: 117–2990 mm^?2), area fractions (?) of minerals (?_plag?=?23–45%, ?_amph?=?0–28%, ?_cpx?=?0–6%, ?_oxides?=?0.6–5.5%), and the relative abundance of plagioclase and amphibole (?_plag/?_amph?=?1.0–4.6). Textural parameters vary more significantly within, rather than between, the two compositional lineages, and in some cases show marked variations across individual clasts, implying that each inclusion’s cooling history, rather than bulk composition, was the dominant control on textural development. Groundmass mineral compositions are also diverse both within and between inclusions (e.g. plagioclase from An_34–92, with typical intra-clast variability of ~?20 mol%), and do not correlate with bulk chemistry. Diverse groundmass textures and mineral and glass chemistries are inferred to reflect complex interplay of a range of factors including the degree and rate of undercooling, bulk composition, water content and, possibly, intensive variables. Our data are inconsistent with breakup of a crystallizing ponded mafic layer at the base of the Oruanui melt-dominant body, instead implying that each inclusion partially crystallized as a discrete body with a unique cooling history. Extensive ingestion of mush-derived macro-crystals suggests that mechanical breakup of mafic feeder dikes occurred within a transition zone between the mush and melt-dominant magma body. In this zone, the mush lacked yield strength, as has been inferred from field studies of narrow (meters to few tens of meters) mush-melt transition zones preserved in composite intrusions. Evidence for plastic deformation of inclusions during eruption and the abundance of fresh residual glass in inclusions from all eruptive phases suggest that the inclusions formed syn-eruptively, and must have been formed recurrently at multiple stages throughout the eruption.     

Pattern,style and timing of British–Irish Ice Sheet advance and retreat over the last 45 000 years: evidence from NW Scotland and the adjacent continental shelf

Predicting the future response of ice sheets to climate warming and rising global sea level is important but difficult. This is especially so when fast-flowing glaciers or ice streams, buffered by ice shelves, are grounded on beds below sea level. What happens when these ice shelves are removed? And how do the ice stream and the surrounding ice sheet respond to the abruptly altered boundary conditions? To address these questions and others we present new geological, geomorphological, geophysical and geochronological data from the ice-stream-dominated NW sector of the last British–Irish Ice Sheet (BIIS). The study area covers around 45 000 km² of NW Scotland and the surrounding continental shelf. Alongside seabed geomorphological mapping and Quaternary sediment analysis, we use a suite of over 100 new absolute ages (including cosmogenic-nuclide exposure ages, optically stimulated luminescence ages and radiocarbon dates) collected from onshore and offshore, to build a sector-wide ice-sheet reconstruction combining all available evidence with Bayesian chronosequence modelling. Using this information we present a detailed assessment of ice-sheet advance/retreat history, and the glaciological connections between different areas of the NW BIIS sector, at different times during the last glacial cycle. The results show a highly dynamic, partly marine, partly terrestrial, ice-sheet sector undergoing large size variations in response to sub-millennial-scale climatic (Dansgaard–Oeschger) cycles over the last 45 000 years. Superimposed on these trends we identify internally driven instabilities, operating at higher frequency, conditioned by local topographic factors, tidewater dynamics and glaciological feedbacks during deglaciation. Specifically, our new evidence indicates extensive marine-terminating ice-sheet glaciation of the NW BIIS sector during Greenland Stadials 12 to 9 – prior to the main ‘Late Weichselian’ ice-sheet glaciation. After a period of restricted glaciation, in Greenland Interstadials 8 to 6, we find good evidence for rapid renewed ice-sheet build-up in NW Scotland, with the Minch ice-stream terminus reaching the continental shelf edge in Greenland Stadial 5, perhaps only briefly. Deglaciation of the NW sector took place in numerous stages. Several grounding-zone wedges and moraines on the mid- and inner continental shelf attest to significant stabilizations of the ice-sheet grounding line, or ice margin, during overall retreat in Greenland Stadials 3 and 2, and to the development of ice shelves. NW Lewis was the first substantial present-day land area to deglaciate, in the first half of Greenland Stadial 3 at a time of globally reduced sea-level c. 26 kabp , followed by Cape Wrath at c. 24 kabp. The topographic confinement of the Minch straits probably promoted ice-shelf development in early Greenland Stadial 2, providing the ice stream with additional support and buffering it somewhat from external drivers. However, c. 20–19 kabp , as the grounding-line migrated into shoreward deepening water, coinciding with a marked change in marine geology and bed strength, the ice stream became unstable. We find that, once underway, grounding-line retreat proceeded in an uninterrupted fashion with the rapid loss of fronting ice shelves – first in the west, then the east troughs – before eventual glacier stabilization at fjord mouths in NW Scotland by ~17 kabp. Around the same time, ~19–17 kabp , ice-sheet lobes readvanced into the East Minch – possibly a glaciological response to the marine-instability-triggered loss of adjacent ice stream (and/or ice shelf) support in the Minch trough. An independent ice cap on Lewis also experienced margin oscillations during mid-Greenland Stadial 2, with an ice-accumulation centre in West Lewis existing into the latter part of Heinrich Stadial 1. Final ice-sheet deglaciation of NW mainland Scotland was punctuated by at least one other coherent readvance at c. 15.5 kabp , before significant ice-mass losses thereafter. At the glacial termination, c. 14.5 kabp , glaciers fed outwash sediment to now-abandoned coastal deltas in NW mainland Scotland around the time of global Meltwater Pulse 1A. Overall, this work on the BIIS NW sector reconstructs a highly dynamic ice-sheet oscillating in extent and volume for much of the last 45 000 years. Periods of expansive ice-sheet glaciation dominated by ice-streaming were interspersed with periods of much more restricted ice-cap or tidewater/fjordic glaciation. Finally, this work indicates that the role of ice streams in ice-sheet evolution is complex but mechanistically important throughout the lifetime of an ice sheet – with ice streams contributing to the regulation of ice-sheet health but also to the acceleration of ice-sheet demise via marine ice-sheet instabilities.     

The evolution of the terrestrial-terminating Irish Sea glacier during the last glaciation

Here we reconstruct the last advance to maximum limits and retreat of the Irish Sea Glacier (ISG), the only land-terminating ice lobe of the western British Irish Ice Sheet. A series of reverse bedrock slopes rendered proglacial lakes endemic, forming time-transgressive moraine- and bedrock-dammed basins that evolved with ice marginal retreat. Combining, for the first time on glacial sediments, optically stimulated luminescence (OSL) bleaching profiles for cobbles with single grain and small aliquot OSL measurements on sands, has produced a coherent chronology from these heterogeneously bleached samples. This chronology constrains what is globally an early build-up of ice during late Marine Isotope Stage 3 and Greenland Stadial (GS) 5, with ice margins reaching south Lancashire by 30 ± 1.2 ka, followed by a 120-km advance at 28.3 ± 1.4 ka reaching its 26.5 ± 1.1 ka maximum extent during GS-3. Early retreat during GS-3 reflects piracy of ice sources shared with the Irish-Sea Ice Stream (ISIS), starving the ISG. With ISG retreat, an opportunistic readvance of Welsh ice during GS-2 rode over the ISG moraines occupying the space vacated, with ice margins oscillating within a substantial glacial over-deepening. Our geomorphological chronosequence shows a glacial system forced by climate but mediated by piracy of ice sources shared with the ISIS, changing flow regimes and fronting environments.