Instrument development to search for biomarkers on mars: Terrestrial acidophile, iron-powered chemolithoautotrophic communities as model systems

Recent findings by the MER rover opportunity confirming the presence of iron minerals that can only be formed in the presence of water emphasize the study of analogous environments to Mars on Earth. The study of chemolithoautotrophic communities living in acidic iron-rich habitats is highly relevant in order to identify Mars analog environment-specific biomarkers. Iron oxidizing bacteria like Leptospirillum ferrooxidans and Acidithiobacillus ferrooxidans have ways of life for which it is feasible to identify a past or present hypothetical niche on Mars. We have developed a strategy for biomarker identification based on: (i) search for biosignatures on acid and metal-rich environments; (ii) development of an immunosensor microarray; and (iii) integration into an instrument for autonomous and remote operation. The instrument that we have built, called Signs Of LIfe Detector (SOLID), is capable of processing a variety of samples for the detection of specific biomarkers. Antibodies against several bacterial strains have been developed and tested in a microarray biosensor on SOLID. Tests with field samples have been successfully performed, allowing the detection of L. ferrooxidans, A. ferrooxidans present in sediment samples.     

Modes to replace transitional asymptotic ray fields in a vertically inhomogeneous earth model

Summary. Asymptotic ray theory (ART) fails in transition regions near critically reflected, bottom glancing or caustic-forming rays in a vertically inhomogeneous layered earth. These deficiencies are repaired here by replacing the transitional ray fields with guided modes plus truncation remainders. Exact ray-mode equivalences and their high-frequency asymptotic approximations are formulated, and their validity and efficiency are verified by numerical comparisons for SH motion in a two-layer earth model comprised of an inhomogeneous sediment above an homogeneous semi-infinite bedrock.     

Three dimensional simulation of fluid flow in X‐ray CT images of porous media

A numerical scheme is developed in order to simulate fluid flow in three dimensional (3‐D) microstructures. The governing equations for steady incompressible flow are solved using the semi‐implicit method for pressure‐linked equations (SIMPLE) finite difference scheme within a non‐staggered grid system that represents the 3‐D microstructure. This system allows solving the governing equations using only one computational cell. The numerical scheme is verified through simulating fluid flow in idealized 3‐D microstructures with known closed form solutions for permeability. The numerical factors affecting the solution in terms of convergence and accuracy are also discussed. These factors include the resolution of the analysed microstructure and the truncation criterion. Fluid flow in 2‐D X‐ray computed tomography (CT) images of real porous media microstructure is also simulated using this numerical model. These real microstructures include field cores of asphalt mixes, laboratory linear kneading compactor (LKC) specimens, and laboratory Superpave gyratory compactor (SGC) specimens. The numerical results for the permeability of the real microstructures are compared with the results from closed form solutions. Copyright © 2004 John Wiley & Sons, Ltd.     

The dust coma of periodic comet Churyumov-Gerasimenko (1982 VIII)

The dust coma of Comet P/Churyumov-Gerasimenko was monitored in the infrared (1–20 μm) from September 1982 to March 1983. Maximum dust production rate of ～2 × 10⁵ g/sec occured in December, 1 month postperihelion. The ratio of dust/gas production was higher than that in other short-period comets. No silicate feature was visible in the 8- to 13-μm spectrum on 23 October. The mean geometric albedo of the grains was ～0.04 at 1.25 μm and ～0.05 at 2.2 μm.     

Formation of the regular satellites of giant planets in an extended gaseous nebula I: subnebula model and accretion of satellites

We model the subnebulae of Jupiter and Saturn wherein satellite accretion took place. We expect each giant planet subnebula to be composed of an optically thick (given gaseous opacity) inner region inside of the planet’s centrifugal radius (where the specific angular momentum of the collapsing giant planet gaseous envelope achieves centrifugal balance, located at rCJ ∼ 15R_J for Jupiter and rCS ∼ 22R_S for Saturn) and an optically thin, extended outer disk out to a fraction of the planet’s Roche-lobe (R_H), which we choose to be ∼R_H/5 (located at ∼150 R_J near the inner irregular satellites for Jupiter, and ∼200R_S near Phoebe for Saturn). This places Titan and Ganymede in the inner disk, Callisto and Iapetus in the outer disk, and Hyperion in the transition region. The inner disk is the leftover of the gas accreted by the protoplanet. The outer disk may result from the nebula gas flowing into the protoplanet during the time of giant planet gap-opening (or cessation of gas accretion). For the sake of specificity, we use a solar composition “minimum mass” model to constrain the gas densities of the inner and outer disks of Jupiter and Saturn (and also Uranus). Our model has Ganymede at a subnebula temperature of ∼250 K and Titan at ∼100 K. The outer disks of Jupiter and Saturn have constant temperatures of 130 and 90 K, respectively.Our model has Callisto forming in a time scale ∼10⁶ years, Iapetus in 10⁶-10⁷ years, Ganymede in 10³-10⁴ years, and Titan in 10⁴-10⁵ years. Callisto takes much longer to form than Ganymede because it draws materials from the extended, low density portion of the disk; its accretion time scale is set by the inward drift times of satellitesimals with sizes 300-500 km from distances ∼100R_J. This accretion history may be consistent with a partially differentiated Callisto with a ∼300-km clean ice outer shell overlying a mixed ice and rock-metal interior as suggested by Anderson et al. (2001), which may explain the Ganymede-Callisto dichotomy without resorting to fine-tuning poorly known model parameters. It is also possible that particulate matter coupled to the high specific angular momentum gas flowing through the gap after giant planet gap-opening, capture of heliocentric planetesimals by the extended gas disk, or ablation of planetesimals passing through the disk contributes to the solid content of the disk and lengthens the time scale for Callisto’s formation. Furthermore, this model has Hyperion forming just outside Saturn’s centrifugal radius, captured into resonance by proto-Titan in the presence of a strong gas density gradient as proposed by Lee and Peale (2000). While Titan may have taken significantly longer to form than Ganymede, it still formed fast enough that we would expect it to be fully differentiated. In this sense, it is more like Ganymede than like Callisto (Saturn’s analog of Callisto, we expect, is Iapetus). An alternative starved disk model whose satellite accretion time scale for all the regular satellites is set by the feeding of planetesimals or gas from the planet’s Roche-lobe after gap-opening is likely to imply a long accretion time scale for Titan with small quantities of NH₃ present, leading to a partially differentiated (Callisto-like) Titan. The Cassini mission may resolve this issue conclusively. We briefly discuss the retention of elements more volatile than H₂O as well as other issues that may help to test our model.     

Merging of low-mass systems and the origin of the fundamental plane

We present the preliminary results of a study of how small stellar systems merge to form larger ones. As we display the families of galaxies in the μ_e - R_e plane (effective surface brightness versus effective radius) we realize that different morphological types occupy different loci, evidencing the different physical mechanisms operating in each family. As proposed by Capaccioli et al. (1992) this diagram is the logical equivalent of the HR diagram for stars. Here we take some initial steps in understanding of how we can establish the evolutionary tracks, solely due to dynamical processes, in the μ_e - R_e plane, ultimately making a dwarf elliptical to turn into a normal elliptical galaxy. This revised version was published online in August 2006 with corrections to the Cover Date.