Overview and status of estuarine microphytobenthos ecological research in South Africa

This article presents a historical overview of estuarine microphytobenthos (MPB) research in South Africa published over the period 1950 to the present, highlighting major milestones, challenges and estuarine management problems, as well as future research needs within the South African context. The studies that were covered comprise peer-reviewed books and journal articles on relevant research conducted in any estuarine environment during the period reviewed. There was a general increase in MPB research outputs over the decades, from only two publications in the 1950s, to over 20 outputs between 2010 and the present. Whereas the MPB studies in South Africa cover a broad spectrum of themes, the research priorities in these works have changed from taxonomically biased studies to those of ecologically based research. Research in the 1950s and 1960s was exclusively taxonomic in nature, with the first ecological investigation incorporating MPB being produced in the 1970s. By the 1980s, ecological studies dominated the research outputs and this trend has persisted to the present. The 1990s and 2000s saw the rise of research into the role of fresh water as a driver of MPB dynamics, whereas the period 2010 to the present saw an increase in more diverse ecological themes, ranging from an autecological investigation to food-web studies and the assessment of multiple drivers of MPB dynamics. However, the majority of studies have focused on either diatoms or estimates of overall MPB biomass. Moreover, there is a regional underrepresentation that runs broadly along biogeographic lines, with the bulk of the work having been conducted in the warm-temperate and subtropical zones of South Africa. Challenges and future research needs for the region are outlined, as is the need to expand MPB research to include other aspects of the biology and ecology of this flora.     

Presence of microplastics in the tube structure of the reef-building polychaete Gunnarea gaimardi (Quatrefages 1848)

The prevalence of microplastics in the marine environment has resulted in a need to understand their association with various fauna. The aim of this study was to assess whether microplastic particles are present in the tube structure of the indigenous reef-building polychaete Gunnarea gaimardi, which occurs along the coast of South Africa. Sampling was conducted at nine stations along the west and southeast coastlines of South Africa, in July 2016 and April/May 2017. Microplastic particles were recorded in all tube structures of G. gaimardi, with the density ranging between 0.056 and 1.113 microplastic particles g^–1 dry weight (dwt). There were no significant differences between sites (p > 0.05), resulting in an overall average of 0.275 (SD 0.215) microplastic particles g^–1 (dwt). To the authors’ knowledge, this is the first study to show that synthetic polymers are found in the tubes of reef-building polychaetes along the coast of South Africa.     

The importance of phytoplankton size in mediating trophic interactions within the plankton of a southern African estuary

The influence of the phytoplankton size composition in mediating the trophic interactions between the bacteria, phytoplankton, microheterotrophs (<200 μm) and mesozooplankton (>200 μm) was investigated on three occasions in a warm temperate, temporarily open/closed estuary situated along the southern African coastline. Results of the investigation indicated that the microheterotrophs represented the most important consumers of bacteria and chlorophyll (chl)-a <5.0 μm. The low impact of the mesozooplankton on the bacteria and chl-a <5.0 μm during the study appeared to be related to the inability of the larger zooplankton to feed efficiently on small particles. During those periods when total chl-a concentration was dominated by picophytoplankton (<2.0 μm) and microphytoplankton (>20 μm), mesozooplankton were unable to feed efficiently on the chl-a due to feeding constraints. In response to the unfavorable size structure of the phytoplankton assemblages, mesozooplankton appeared to consume the microheterotrophs. The negative impact of the mesozooplankton on the microheterotrophs resulted in a decrease in the impact of these organisms on the bacteria and the chl-a <5.0 μm. This result is consistent with the predator-prey cascades. On the other hand, when the total chl-a was dominated by nanophytoplankton (2–20 μm), mesozooplankton were able to feed directly on the phytoplankton. Results of the study indicate that size structure of the phytoplankton assemblages within estuaries plays an important role in mediating the trophic interactions between the various components of the plankton food web.     

Microzooplankton Grazing in the Southern Ocean: Implications for the Carbon Cycle

Abstract. Microzooplankton grazing and protozooplankton community structure was investigated in austral summer (Jan./Feb.) and winter (June/July) 1993 in the Atlantic sector of the Southern Ocean during the SAAMES (South African Antarctic Marine Ecosystem Study) Il and III cruises. Grazing was estimated at 22 stations in summer and at 15 stations in winter by employing the sequential dilution technique. Nano-heterotrophic flagellates (< 20 μm) and ciliates (aloricate ciliates and tintinnids) dominated the protozooplankton assemblages along both transects. Densities in winter were, however, nearly an order of magnitude lower than in summer. Microzooplankton grazing removed between 0 and 28% (mean = 13.2%) of the initial phytoplankton stock in summer and, between 24 and 51 % of the initial stock (mean = 37.6%) in winter. The potential primary production removed during summer ranged between 0 and 46% (mean = 22.0%) compared with the winter range of 56–83% (mean = 67.2%). Size selectivity grazing experiments conducted during both studies suggest that microzooplankton preferentially graze on the nano- (20–2.0μm) and picophytoplankton (2.0–0.2μm) size fractions. These results have important implications for the efficiency of the carbon pump in the Southern Ocean. During summer when the larger cells dominate phytoplankton biomass, the bulk of the photosynthetically fixed carbon appears to be channelled to the meso- and macrozooplankton fractions. This results in a rapid transfer of organic carbon out of the zone of regeneration to the deep ocean via vertical migration and large faecal pellet production. During winter, however, an increase in the contribution of the smaller size fractions to total phytoplankton biomass results in a greater proportion of the photosynthetically fixed carbon being channelled to the microzooplankton fraction. The efficiency of the carbon pump is, therefore, reduced in that the transfer of carbon below the zone of regeneration is reduced as carbon is recycled mostly within the microbial loop in the upper mixed layer.     

Spatial and temporal patterns in bacterial abundance, production and viral infection in a temporarily open/closed southern African estuary

The spatial and temporal patterns in bacterial abundance, biomass, production, nanoflagellate abundance and the loss of bacterial production due to viral lysis were investigated in a temporarily open/closed estuary along the eastern seaboard of southern Africa over the period May 2006 to April 2007. Bacterial abundance, biomass and production ranged between 1.00 × 10⁹ and 4.93 × 10⁹ cells l⁻¹, 32.43 and 108.59 μg C l⁻¹ and 0.01 and 1.99 μg C l⁻¹ h⁻¹, respectively. With a few exceptions there were no significant spatial patterns in the values (P > 0.05). Bacterial abundance, biomass and production, however, demonstrated a distinct temporal pattern with the lowest values consistently recorded during the winter months. Bacterial dynamics showed no effect of mouth opening events. Nanoflagellate and bacterial abundances were significantly correlated to one another (P < 0.05) suggesting a strong predator-prey relationship. The frequency of visibly infected bacterial cells and the number of virus particles within each bacterial cell during the study demonstrated no significant temporal or spatial pattern (P > 0.05) and ranged from 0.5 to 6.1% and 12.0 to 37.5 virus particles per bacterium, respectively. Viral infection and lysis was thus a constant source of bacterial mortality throughout the year. The estimated percentage of bacterial production removed by viral lysis ranged between 7.8 and 88.9% (mean = 30.3%) of the total which suggests that viral lysis represents a very important source of bacterial mortality during the study.     

Determining spatial changes in the diet of nearshore suspension-feeders along the South African coastline: Stable isotope and fatty acid signatures

Mesoscale oceanographic features, such as upwellings, are known to play an important role in regulating the structure and productivity of nearshore marine communities. Stable isotope (δ¹³C and δ¹⁵N) and fatty acid analyses were employed to assess the influence of an upwelling cell along the south-eastern coastline of southern Africa on the diet of the mussel, Perna perna. Eight sites were sampled: two upstream, three in the vicinity and three downstream of the upwelling cell. Stable isotope and fatty acid signatures indicated that the mussels consumed a diet of detritus derived mainly from macroalgae, diatoms and dinoflagellates. One-way ANOVA on the δ¹³C and δ¹⁵N signatures and the principal component analysis of the fatty acid profiles of the mussels identified distinct groups corresponding to the above mentioned regions. The proportion of diatom biomarkers in the fatty acid profiles decreased downstream of the upwelling region while the proportion of dinoflagellate biomarkers increased. Upwelling regions are typically associated with elevated levels of productivity; however, these systems usually become silicon depleted and result in the replacement of diatoms with dinoflagellates. The highest proportions of the dinoflagellate markers were recorded in the two furthest sites downstream of the upwelling cell. The spatial variation in the diet of the mussels, therefore, appears to reflect the presence of the upwelling cell in the nearshore biology of the region.     

The influence of prolonged mouth closure on selected components of the hyperbenthos in the littoral zone of the temporarily open/closed Kasouga Estuary,South Africa

The influence of prolonged mouth closure on the population dynamics of the caridian shrimp, Palaemon peringueyi and the estuarine isopod, Exosphaeroma hylocoetes, in the littoral zone of temporarily open/closed Kasouga Estuary located on the south-eastern coastline of southern Africa was assessed monthly over the period October 2007 to September 2008. Prolonged mouth closure of the estuary contributed to hypersaline conditions (psu > 35) prevailing throughout the estuary for the last four months of the study. The high salinities coincided with a decrease in the areal extent (up to 80%) of the submerged macrophytes, mainly Ruppia maritima, within the littoral zone of the estuary. Total abundance and biomass values of the shrimp and isopod over the period of investigation ranged from 0 to 14.6 ind m⁻², from 0 to 13.3 mg dwt m⁻², from 12 to 1540 ind m⁻² and from 0.1 to 2.16 mg dwt m⁻², respectively. Maximum values of both the shrimp and isopod were recorded in the upper reaches of the estuary in close association with R. maritima. Over the course of the investigation, both the abundance and biomass values of the shrimp decreased significantly (P < 0.05 in both cases) which could be related to reduced habitat availability, R. maritima, that acts as a refuge against fish predation. Additionally, the decrease in abundance and biomass values could be attributed to reduced recruitment opportunities for the shrimp and the cessation of reproduction in the estuarine isopod. The establishment of a link to the marine environment following an overtopping event in September 2008 contributed to a decrease in salinity within the system although no recruitment of either the isopod or shrimp was recorded.     

川西理塘地区第四纪冰川堆积物的表面暴露年龄

青藏高原第四纪冰川发育期次及时代确认吸引着众多地质学家的关注,尽管它是一个众所周知且极为重要的地球科学问题,但古冰川发育时代的确定一直悬而未决.