Biomarker-based Seawater Temperatures of Winter Sinking Particles and Core-top Sediment in the Ulleung Basin of the East Sea

Ocean Science Journal - This study evaluates the application of biomarkerbased temperature proxy data (alkenone with its resultant $$U_{37}^{K'}$$ index and glycerol dialkyl glycerol tetraether...     

Sediment transport and beach morphodynamics induced by free long waves,bound long waves and wave groups

New laboratory data are presented on the influence of free long waves, bound long waves and wave groups on sediment transport in the surf and swash zones. As a result of the very significant difficulties in isolating and identifying the morphodynamic influences of long waves and wave groups in field conditions, a laboratory study was designed specifically to enable measurements of sediment transport that resolve these influences. The evolution of model sand beaches, each with the same initial plane slope, was measured for a range of wave conditions, firstly using monochromatic short waves. Subsequently, the monochromatic conditions were perturbed with free long waves and then substituted with bichromatic wave groups with the same mean energy flux. The beach profile changes and net cross-shore transport rates were extracted and compared for the different wave conditions, with and without long waves and wave groups. The experiments include a range of wave conditions, e.g. high-energy, moderate-energy, low-energy waves, which induce both spilling and plunging breakers and different turbulent intensities, and the beaches evolve to form classical accretive, erosive, and intermediate beach states. The data clearly demonstrate that free long waves influence surf zone morphodynamics and promote increased onshore sediment transport during accretive conditions and decreased offshore transport under erosive conditions. In contrast, wave groups, which can generate both forced and free long waves, generally reduce onshore transport during accretive conditions and increase offshore transport under erosive conditions. The influence of the free long waves and wave groups is consistent with the concept of the relative fall velocity, H/w_sT, as a dominant parameter controlling net beach erosion or accretion. Free long waves tend to reduce H/w_sT, promoting accretion, while wave groups tend to increase the effective H/w_sT, promoting erosion.     

Mapping urban growth of the capital city of Honduras from Landsat data using the impervious surface fraction algorithm

This study developed an impervious surface fraction algorithm (ISFA) for automatic mapping of urban areas from Landsat data. We processed the data for 2001 and 2014 to trace the urbanization of Tegucigalpa, the capital city of Honduras, using a four-step procedure: (1) data pre-processing to perform image reflectance normalization, (2) quantification of impervious surface area (ISA) using ISFA, (3) accuracy assessment of mapping results and (4) change analysis of urban growth. The mapping results compared with the ground reference data confirmed the validity of ISFA for automatic delineation of ISA in the study region. The overall accuracy and Kappa coefficient achieved for 2001 were 92.8% and 0.86, while the values for 2014 were 91.8% and 0.84, respectively. The results of change detection between the classification maps indicated that ISA increased approximately 1956.7 ha from 2001 to 2014, mainly attributing to the increase of the city’s population.     

Assessing the ecosystem health status of Korea Gwangyang and Jinhae bays based on a planktonic index of biotic integrity (P-IBI)

To assess the responses of planktonic organisms to pollutants in the coastal ecosystems of Gwangyang and Jinhae bays in Korea, we investigated seasonal changes in various biological factors during the period from 2010 to 2012. Based on the characteristics of nutrient uptake by planktonic organisms under the coastal pollution conditions, we focused on four major parameters: total phytoplankton, harmful algal bloom (HAB) species, heterotrophic bacteria (HB) and Escherichia coli to develop a planktonic index of biotic integrity (P-IBI). The threshold values for abundances of total phytoplankton, HAB species and HB were based on the zero Z-score following normal distribution of the data for each parameter during the three years. Based on this approach, the threshold values were: 1.2 × 10⁶ cells L^?1 for total phytoplankton; 3.3 × 10⁴ cells L^?1 for HAB species; and 1.7 × 10⁶ cells mL^?1for HB. Five grade levels for the P-IBI were established, based on the zero Z-scores. The threshold value for E. coli not to be normalized was based on the USEPA and the Korean Ministry of Oceans and Fisheries guidelines. Validity of the grades and threshold values for each parameter established using the field data were tested by algal bioassays in a mesocosm enclosure, which supported the threshold values obtained in the field. In Gwangyang Bay, the annual integrated score for the P-IBI in 2010 was better than in the other years of the study. In Jinhae Bay, the P-IBI for the inner area of Masan Bay was Grade IV–V, indicating unhealthy conditions relative to the central and western outer areas, where the P-IBI varied from Grade II to III. The P-IBI values for Gwangyang and Jinhae bays were mostly rated as “Good (Grade II) or Fair (Grade III)”, except for a few stations in the semi-enclosed areas of the inner part of Jinhae Bay. From an overall view based on the P-IBI developed in this study, the coastal ecosystem health status in Gwangyang Bay was in a better condition than Jinhae Bay. The P-IBI indicated also a change to an unhealthy status during the rainy periods of spring and summer, whereas during winter and autumn the index indicated healthy conditions.     

Microphytobenthic biomass and species composition in intertidal flats of the Nakdong River estuary, Korea

Intertidal microphytobenthos (MPB) were investigated monthly from August 2006 to March 2008 at four different sites in the sand flats of Nakdong River estuary, Korea. Samples of surface sediment (ca. 1 cm) were collected, and chlorophyll a was extracted as biomass estimation. Species identification and enumeration were carried out by light microscopy, assisted where necessary by scanning electronic microscopy. Biomass varied between 0.47 and 16.58 μg cm⁻³, abundance changed from 5.25 to 414.75 × 10³ cells cm⁻³, while the Shannon diversity indexes ranged between 0.69 and 2.35 H′. Thirty-nine MPB taxa were identified, primarily composed of epipelic diatoms, among which Amphora and Navicula were the most abundant genera. Based on the biomass, abundance, species composition and their dynamics, MPB assemblages of sampling sites were grouped into three distinct communities corresponding to their sediment composition characteristics. Multivariate correlation analysis revealed that biomass was positively related to mud and very fine sand, negatively related to fine and medium sand, but not significantly related to environmental factors such as pore water nutrients, light intensity and salinity, which fluctuated rapidly during emersion period. Cluster analysis corroborated the division of MPB communities according to site types on seasonal scales, and also showed seasonality between sites by cluster of all summer groups. Principal component analysis identified that variability in species composition was significantly affected by mud, very fine sand, fine sand, light intensity, and sediment temperature. This study suggests that sediment composition plays an important role in the functioning of intertidal MPB communities in estuarine ecosystems.     

Germination rate of Phyllospadix japonicus seeds relative to storage methods and periods

To determine the optimal storage method and longest possible storage period of Phyllospadix japonicus seeds, we examined post-storage germination rates using different storage methods and periods for P. japonicus seeds harvested in Korean coastal waters. P. japonicus seeds are classified as recalcitrant seeds with an average moisture content of 45.4%. Germination rates of P. japonicus seeds stored in seawater at 4 °C, seawater at room temperature with air supply, and an aquarium with continuous seawater circulation ranged from 35.0% to 43.5%, whereas seeds stored in seawater at 30°C, a refrigerator at ?20°C, and a desiccator at room temperature did not germinate. Seeds stored at 4°C maintained germination rates of 72.5～73.0% until 30 days of storage, but showed rapidly decreasing germination rates after 60 days and no germination after 180 days. Since few studies have investigated seed storage of P. japonicus, these results will serve as useful data for seed-based P. japonicus habitat restoration.     

Sinking Particle Flux in the Subtropical Oligotrophic Northwestern Pacific from a Short-term Sediment Trap Experiment

Time-series sediment traps were deployed in the subtropical oligotrophic northwestern Pacific (SONP) at three depths from August to September 2015 to better understand vertical flux of sinking particles. Sinking particles were collected at 5-day intervals over the sediment trap deployment period. The average total mass flux at water depths of 400 m, 690 m, and 1,710 m was 9.1, 4.4, and 4.1 mg m^-2day^-1, respectively. CaCO₃ materials constituted 50 to 70% of sinking particles while in comparison particulate organic carbon (POC) constituted up to 20%. A synchronous variation of total mass flux was observed at the three depths, indicating that calcite-dominated particles sank from 400 to 1,710 m within a 5-day period. POC flux at these water depths was 2.4, 0.38, and 0.31 mg m^-2day^-1, respectively. Our results indicate low transfer efficiencies of 16% from 400 to 690 m and 13% for the 400 to 1,710 m depth range. The estimated transfer efficiencies were significantly lower than those observed at the K2 station in the northwest Pacific subarctic gyre, presumably because of a prevalence of pico-cyanobacteria in the SONP. Because cyanobacteria have a semi-permeable proteinaceous shell, they are more readily remineralized by bacteria than are siliceous phytoplankton in the northwest Pacific subarctic gyre. Continued surface water warming and expansion of the SONP will likely have a profound impact on ocean acidification in the northwest Pacific, possibly affecting the transfer efficiency of sinking POC to the deep-sea.     

3D magnetotelluric modelling including surface topography

An edge finite‐element method has been applied to compute magnetotelluric (MT) responses to three‐dimensional (3D) earth topography. The finite‐element algorithm uses a single edge shape function at each edge of hexahedral elements, guaranteeing the continuity of the tangential electric field while conserving the continuity of magnetic flux at boundaries. We solve the resulting system of equations using the biconjugate gradient method with a Jacobian preconditioner. The solution gives electric fields parallel to the slope of a surface relief that is often encountered in MT surveys. The algorithm is successfully verified by comparison with other numerical solutions for a 3D‐2 model for comparison of modelling methods for EM induction and a ridge model. We use a 3D trapezoidal‐hill model to investigate 3D topographic effects, which are caused mainly by galvanic effects, not only in the Zxy mode but also in the Zyx mode. If a 3D topography were approximated by a two‐dimensional topography therefore errors occurring in the transverse electric mode would be more serious than those in the transverse magnetic mode.