Electrochemical detection of harmful algae and other microbial contaminants in coastal waters using hand-held biosensors

Standard methods to identify microbial contaminants in the environment are slow, laborious, and can require specialized expertise. This study investigated electrochemical detection of microbial contaminants using commercially available, hand-held instruments. Electrochemical assays were developed for a red tide dinoflagellate (Karenia brevis), fecal-indicating bacteria (Enterococcus spp.), markers indicative of human sources of fecal pollution (human cluster Bacteroides and the esp gene of Enterococcus faecium), bacterial pathogens (Escherichia coli 0157:H7, Salmonella spp., Campylobacter jejuni, Staphylococcus aureus), and a viral pathogen (adenovirus). For K. brevis, two assay formats (Rapid PCR-Detect and Hybrid PCR-Detect) were tested and both provided detection limits of 10 genome equivalents for DNA isolated from K. brevis culture and amplified by PCR. Sensitivity with coastal water samples was sufficient to detect K. brevis that was "present" (相似文献   

The convergence of GIS and social media: challenges for GIScience

It is hard to believe that 10 years have passed since we wrote our guest editorial for IJGIS (Sui and Goodchild 2001 Sui, D.Z. and Goodchild, M.F. 2001. Are GIS becoming new media?. International Journal of Geographical Information Science, 15(5): 387–390. [Taylor & Francis Online], [Web of Science ®] , [Google Scholar]). Using the nascent evidence that emerged in the late 1990s, we speculated back in 2001 that geographic information systems (GIS) were rapidly becoming part of the mass media. On the basis of the proposition of GIS as media, we were able to link GIScience with theories in media studies such as Marshall McLuhan's law of the media, which considers modern media as modifiable perceptive extensions of human thought (Sui and Goodchild 2003 Sui, D.Z. and Goodchild, M.F. 2003. A tetradic analysis of GIS and society using McLuhan's law of media. Canadian Geographers, 47(1): 5–17. [Crossref], [Web of Science ®] , [Google Scholar]). Remarkable conceptual and technological advances in GIS have been made during the past 10 years. The goal of this review is to provide an update on the ‘GIS as media’ argument we made 10 years ago and to discuss the new challenges for GIScience posed by the growing convergence of GIS and social media.     

Impact of model development,calibration and validation decisions on hydrological simulations in West Lake Erie Basin

Watershed simulation models are used extensively to investigate hydrologic processes, landuse and climate change impacts, pollutant load assessments and best management practices (BMPs). Developing, calibrating and validating these models require a number of critical decisions that will influence the ability of the model to represent real world conditions. Understanding how these decisions influence model performance is crucial, especially when making science‐based policy decisions. This study used the Soil and Water Assessment Tool (SWAT) model in West Lake Erie Basin (WLEB) to examine the influence of several of these decisions on hydrological processes and streamflow simulations. Specifically, this study addressed the following objectives (1) demonstrate the importance of considering intra‐watershed processes during model development, (2) compare and evaluated spatial calibration versus calibration at outlet and (3) evaluate parameter transfers across temporal and spatial scales. A coarser resolution (HUC‐12) model and a finer resolution model (NHDPlus model) were used to support the objectives. Results showed that knowledge of watershed characteristics and intra‐watershed processes are critical to produced accurate and realistic hydrologic simulations. The spatial calibration strategy produced better results compared to outlet calibration strategy and provided more confidence. Transferring parameter values across spatial scales (i.e. from coarser resolution model to finer resolution model) needs additional fine tuning to produce realistic results. Transferring parameters across temporal scales (i.e. from monthly to yearly and daily time‐steps) performed well with a similar spatial resolution model. Furthermore, this study shows that relying solely on quantitative statistics without considering additional information can produce good but unrealistic simulations. Copyright © 2015 John Wiley & Sons, Ltd.     

“Lessons for marine conservation planning: A comparison of three marine protected area planning processes”

Various approaches have been used to establish marine protected areas (MPAs) in different countries. In this paper we compare and review three processes to establish MPAs within the United States and Australia. These two countries share many similarities in their cultures, but their approaches to managing marine resources differ considerably. Each of these efforts to establish or review MPAs was motivated by concern about declines of targeted marine species or habitats. However, the government actions varied because of differences in governance, planning process including public input, and the role of science. Comparing these processes highlights effective approaches for protecting marine ecosystems and gaining public support.     

Stratigraphy of total metals in PIRLA sediment cores

Sediment cores from 30 low-alkalinity lakes in northern New England (NE), New York (NY), the northern Great Lakes States (NGLS) of Minnesota, Michigan, and Wisconsin, and Florida (FL) have been dated by ²¹⁰Pb and analyzed for water and organic content, eight major elements (Al, Ti, Fe, Mn, Ca, Mg, Na, K) plus four trace metals (Pb, Zn, Cu, and V). Variations in the percentages of major elements through time are dominated by long-term independent variations in the abundance of SiO₂, FeO, and to a lesser extent Ca and Al. Additional variations are caused by varying proportions of inorganic matter. Major variations in chemistry are generally unrelated to documented distrubances in the watersheds; most disturbances are minor fires or selective logging.Accelerated accumulation of Pb from atmospheric sources into sediment first occurs in sediment dated between 1800 and 1850 in NY and NE, slightly later in the NGLS region, and about 1900 in FL. Modern accumulation rates in all areas are comparable (ca. 1 to 4 g cm^–2 yr^–1). Accumulation rates of Pb in some lakes have declined significantly from 1975 to 1985. Atmospheric deposition of anthropogenic Zn and Cu is also indicated by generally increasing accumulation rates in sediment cores, but the record is not as clear nor are chemical profiles in all lakes parallel to the trends in atmospheric emissions inferred on the basis of fossil fuel consumption, smelting, and other industrial activities. Inter-lake variations in profiles of Cu and Zn are large. Vanadium accumulation rates increase by the 1940s in NY and NE, but not until the 1950s in the NGLS region. This timing correlates with regional trends in the combustion of fuel oil, a major source of atmospheric V.Acidification of some of the lakes is suggested by decreases in the concentration and accumulation rates of Mn, Ca, and Zn in recent sediment, relative to other elements of catchment origin. The decreases generally occur slightly before the onset of acidification as indicated by diatoms. Increased sediment accumulation rates for Fe may indicate the acidification of watershed soils. The use of the accumulation rate of TiO₂ as an indicator of rates of erosion and for normalization of trace metal accumulation rates is in question for lakes where the flux of TiO₂ from the atmosphere varies and is a significant fraction of the total flux of TiO₂ to the sediment.This is the thirteenth of a series of papers to be published by this journal which is a contribution of the Paleoecological Investigation of Recent Lake Acidification (PIRLA) project. Drs. D. F. Charles and D. R. Whitehead are guest editors for this series.     

The effect of landscape and hydrologic variables on the prehistoric Salado: Geoarchaeological investigations in the Tonto Basin,Arizona

Geoarchaeological investigations in the Tonto Basin, Arizona provide insights into the Classic period Salado occupation from A.D. 1150 to 1450. Geomorphic reconstructions show that the Salado pursued irrigation agriculture on an intermediate Holocene terrace that was protected from flooding, while permanent settlements were located on stable Pleistocene landforms overlooking the field areas. Carrying-capacity-based calculations show that the population during the Classic period numbered in the low thousands. The development and subsequent cultural changes during the Classic period are tied to streamflow variations and cultural factors. The final abandonment of the Tonto Basin around A.D. 1450 is not the result of a major landscape change, but instead is linked to high frequency hydrologic variations that influenced food production coupled with cultural factors. © 1998 John Wiley & Sons, Inc.     

A finite element approach to the simulation of hydraulic fractures with lag

We presented a finite‐element‐based algorithm to simulate plane‐strain, straight hydraulic fractures in an impermeable elastic medium. The algorithm accounts for the nonlinear coupling between the fluid pressure and the crack opening and separately tracks the evolution of the crack tip and the fluid front. It therefore allows the existence of a fluid lag. The fluid front is advanced explicitly in time, but an implicit strategy is needed for the crack tip to guarantee the satisfaction of Griffith's criterion at each time step. We enforced the coupling between the fluid and the rock by simultaneously solving for the pressure field in the fluid and the crack opening at each time step. We provided verification of our algorithm by performing sample simulations and comparing them with two known similarity solutions. Copyright © 2012 John Wiley & Sons, Ltd.     

Effect of bed surface roughness on longitudinal dispersion in artificial open channels

In several empirical and modelling studies on river hydraulics, dispersion was negatively correlated to surface roughness. In this study, it was aimed to investigate the influence of surface roughness on longitudinal dispersion under controlled conditions. In artificial flow channels with a length of 104 m, tracer experiments with variations in channel bed material were performed. By use of measured tracer breakthrough curves, average flow velocity, mean longitudinal dispersion, and mean longitudinal dispersivity were calculated. Longitudinal dispersion coefficients ranged from 0·018 m² s^?1 in channels with smooth bed surface up to 0·209 m² s^?1 in channels with coarse gravel as bed material. Longitudinal dispersion was linearly related to mean flow velocity. Accordingly, longitudinal dispersivities ranged between 0·152 ± 0·017 m in channels with smooth bed surface and 0·584 ± 0·015 m in identical channels with a coarse gravel substrate. Grain size and surface roughness of the channel bed were found to correlate positively to longitudinal dispersion. This finding contradicts several existing relations between surface roughness and dispersion. Future studies should include further variation in surface roughness to derive a better‐founded empirical equation forecasting longitudinal dispersion from surface roughness. Copyright © 2011 John Wiley & Sons, Ltd.     

Fluvial process and the establishment of bottomland trees

The effects of river regulation on bottomland tree communities in western North America have generated substantial concern because of the important habitat and aesthetic values of these communities. Consideration of such effects in water management decisions has been hampered by the apparent variability of responses of bottomland tree communities to flow alteration. When the relation between streamflow and tree establishment is placed in a geomorphic context, however, much of that variability is explained, and prediction of changes in the tree community is improved.The relation between streamflow and establishment of bottomland trees is conditioned by the dominant fluvial process or processes acting along a stream. For successful establishment, cottonwoods, poplars, and willows require bare, moist surfaces protected from disturbance. Channel narrowing, channel meandering, and flood deposition promote different spatial and temporal patterns of establishment. During channel narrowing, the site requirements are met on portions of the bed abandoned by the stream, and establishment is associated with a period of low flow lasting one to several years. During channel meandering, the requirements are met on point bars following moderate or higher peak flows. Following flood deposition, the requirements are met on flood deposits ;high above the channel bed. Flood deposition can occur along most streams, but where a channel is constrained by a narrow valley, this process may be the only mechanism that can produce a bare, moist surface high enough to be safe from future disturbance. Because of differences in local bedrock, tributary influence, or geologic history, two nearby reaches of the same stream may be dominated by different fluvial processes and have different spatial and temporal patterns of trees. We illustrate this phenomenon with examples from forests of plains cottonwood (Populus deltoides ssp. monilifera) along meandering and constrained reaches of the Missouri River in Montana.