Historical genetics on a sediment core from a Kenyan lake: intraspecific genotype turnover in a tropical rotifer is related to past environmental changes

Using molecular genetic methods and an ancient DNA approach, we studied population and species succession of rotifers of the genus Brachionus in the Kenyan alkaline-saline crater lake Sonachi since the beginning of the 19th century as well as distribution of Brachionus haplotypes in recent and historic sediments of other lakes of the East African Rift System. The sediment core record of Lake Sonachi displays haplotypes of a distinct evolutionary lineage in all increments. Populations were dominated by a single mitochondrial haplotype for a period of 150 years, and two putatively intraspecific turnovers in dominance occurred. Both changes are concordant with major environmental perturbations documented by a profound visible change in sediment composition of the core. The first change was very abrupt and occurred after the deposition of volcanic ash at the beginning of the 19th century. The second change coincides with a major lake level lowstand during the 1940s. It was preceded by a period of successively declining lake level, in which two other haplotypes appeared in the lake. One of these putatively belongs to another species documented in historical and recent Kenyan lake sediments. The analysis of plankton population dynamics through historical time can reveal patterns of population persistence and turnover in relation to environmental changes.     

Diatom habitats,species diversity and water-depth inference models across surface-sediment transects in Worth Lake,northwest Ontario,Canada

We analyzed surface-sediment samples collected along transects from three sub-basins of a relatively large (~115 ha), bathymetrically complex lake, in northwest Ontario, Canada, to assess the reproducibility of diatom species habitats and diversity along a water-depth gradient. Transects displayed different orientations with respect to prevailing wind direction and varied in complexity and degree of slope along the lake bottom. Each transect consisted of three replicate samples at a resolution of ~1 m water depth from ~1 to 30 m for the two deep-basin transects and from ~1 to 18 m in the shallower basin. Distinct diatom assemblages were identified in all transects: (1) a near-shore community composed largely of attached life-forms and some motile benthic taxa, (2) a mid-depth community composed largely of motile life-forms and other benthic taxa that are adapted to lower light conditions (e.g. Staurosirella pinnata), and (3) a deep-water community dominated by planktonic taxa. Species richness was highest in the benthic zones (<9 m), with greatest species evenness in the mid-depth zone (~3–9 m). Species richness and evenness were highly correlated across the three transects (r = 0.89–0.93, p < 0.01). Diatom-inferred depth models were developed from the individual transects to assess reproducibility and applicability for down-core analyses using modern analog (MAT) and weighted-averaging (WA-PLS) approaches. Coefficients of determination (r ²) for these models ranged from 0.80 to 0.98, and RMSEP ranged from 1.2 to 4.2 m. The models developed from the transect with the highest resolution sampling, gentlest non-complex slope and shallowest maximum depth were the strongest ( r_\textMAT² = 0.97 r_{\text{MAT}}^{2} = 0.97 ; r_{\textWA - PLS}² = 0.98 r_{\text{WA - PLS}}^{2} = 0.98 ) and had the lowest RMSEP (MAT = 1.2 m, WA-PLS = 1.3 m). These inference models can be used to infer past fluctuations in the depth of the benthic/planktonic boundary from cores retrieved near this ecotone and provide a sensitive record of the past change in location of the benthic zone. These types of data can be used to assess past variability in droughts and lake levels to better plan for potential future extremes. Such records incorporate more realistic estimates of natural variability than the ~100-year instrumental records currently used by water resource managers.     

Optimal Decision Making Algorithm for Managed Aquifer Recharge and Recovery Operation Using Near Real‐Time Data: Benchtop Scale Laboratory Demonstration

Aquifers show troubling signs of irreversible depletion as climate change, population growth, and urbanization lead to reduced natural recharge rates and overuse. One strategy to sustain the groundwater supply is to recharge aquifers artificially with reclaimed water or stormwater via managed aquifer recharge and recovery (MAR) systems. Unfortunately, MAR systems remain wrought with operational challenges related to the quality and quantity of recharged and recovered water stemming from a lack of data‐driven, real‐time control. This paper presents a laboratory scale proof‐of‐concept study that demonstrates the capability of a real‐time, simulation‐based control optimization algorithm to ease the operational challenges of MAR systems. Central to the algorithm is a model that simulates water flow and transport of dissolved chemical constituents in the aquifer. The algorithm compensates for model parameter uncertainty by continually collecting data from a network of sensors embedded within the aquifer. At regular intervals the sensor data is fed into an inversion algorithm, which calibrates the uncertain parameters and generates the initial conditions required to model the system behavior. The calibrated model is then incorporated into a genetic algorithm that executes simulations and determines the best management action, for example, the optimal pumping policy for current aquifer management goals. Experiments to calibrate and validate the simulation‐optimization algorithm were conducted in a small two‐dimensional synthetic aquifer under both homogeneous and heterogeneous packing configurations. Results from initial experiments validated the feasibility of the approach and suggested that our system could improve the operation of full‐scale MAR facilities.     

Reclassification of four aubrites as enstatite chondrite impact melts: Potential geochemical analogs for Mercury

We present petrologic and isotopic data on Northwest Africa (NWA) 4799, NWA 7809, NWA 7214, and NWA 11071 meteorites, which were previously classified as aubrites. These four meteorites contain between 31 and 56 vol% of equigranular, nearly endmember enstatite, Fe,Ni metal, plagioclase, terrestrial alteration products, and sulfides, such as troilite, niningerite, daubréelite, oldhamite, and caswellsilverite. The equigranular texture of the enstatite and the presence of the metal surrounding enstatite indicate that these rocks were not formed through igneous processes like the aubrites, but rather by impact processes. In addition, the presence of pre‐terrestrially weathered metal (7.1–14 vol%), undifferentiated modal abundances compared to enstatite chondrites, presence of graphite, absence of diopside and forsterite, low Ti in troilite, and high Si in Fe,Ni metals suggest that these rocks formed through impact melting on chondritic and not aubritic parent bodies. Formation of these meteorites on a parent body with similar properties to the EHa enstatite chondrite parent body is suggested by their mineralogy. These parent bodies have undergone impact events from at least 4.5 Ga (NWA 11071) until at least 4.2 Ga (NWA 4799) according to ³⁹Ar‐⁴⁰Ar ages, indicating that this region of the solar system was heavily bombarded early in its history. By comparing NWA enstatite chondrite impact melts to Mercury, we infer that they represent imperfect petrological analogs to this planet given their high metal abundances, but they could represent important geochemical analogs for the behavior and geochemical affinities of elements on Mercury. Furthermore, the enstatite chondrite impact melts represent an important petrological analog for understanding high‐temperature processes and impact processes on Mercury, due to their similar mineralogies, Fe‐metal‐rich and FeO‐poor silicate abundances, and low oxygen fugacity.     

A temporal stable isotopic (δ18O, δD,d‐excess) comparison in glacier meltwater streams,Taylor Valley,Antarctica

In this paper, we describe the importance of hyporheic dynamics within Andersen Creek and Von Guerard Stream, Taylor Valley, Antarctica, from the 2010–2011 melt season using natural tracers. Water collection started at flow onset and continued, with weekly hyporheic‐zone sampling. The water δ¹⁸O and δD values were isotopically lighter in the beginning and heavier later in the season. D‐excess measurements were used as an indicator of mixing because an evaporative signature was evident and distinguishable between 2 primary end‐members (glacier meltwater and hyporheic zone). Hyporheic‐zone influence on the channel water was variable with a strong control on streamwater chemistry, except at highest discharges. This work supports previous research indicating that Von Guerard Stream has a large, widespread hyporheic zone that varies in size with time and discharge. Andersen Creek, with a smaller hyporheic zone, displayed hyporheic‐zone solute interaction through the influence from subsurface hypersaline flow. Overall, the evolution of Taylor Valley hyporheic‐zone hydrology is described seasonally. In mid‐December, the hyporheic zone is a dynamic system exchanging with the glacier meltwater in the channel, and with diminishing flow in January, the hyporheic zone drains back into the channel flow also impacting stream chemistry. This work adds new information on the role of hyporheic zone–stream interaction in these glacier meltwater streams.     

Reconstructing medieval April-July mean temperatures in East Anglia, 1256–1431

This paper presents the first annually resolved temperature reconstruction for England in the Middle Ages. To effect this reconstruction the starting date of the grain harvest in Norfolk has been employed as a temperature proxy. Using c. 1,000 manorial accounts from Norfolk, 616 dates indicating the onset of the grain harvest were extracted for the period 1256 to 1431 and a composite Norfolk series was constructed. These data were then converted into a temperature series by calibrating a newly constructed comparison series of grain harvest dates in Norfolk from 1768 to 1816 with the Central England Temperature series. These results were verified over the period 1818?C1867. For the British Isles no other annually resolved proxy data are available and the onset of the grain harvest remains the only proxy for assessing April-July mean temperatures. In addition, this is the first time-series regarding the onset of grain harvests in medieval Europe known so far. The long-term trend in the reconstructed medieval temperature series suggests that there was a cooling in the mean April-July temperatures over the period 1256 to 1431. Average temperatures dropped from 13°C to 12.4°C, which possibly indicates the onset of the Little Ice Age. The decline in values was not steady, however, and the reconstruction period contains decades of warmer spring-early summer temperatures (for example the 1320s to the early 1330s and the 1360s) as well as colder conditions (for example the late 1330s, 1340s and the 1380s). The decline in grain-growing-season average temperatures would not have been a major problem for medieval agriculture, rather the phases of very high interannual variability partly found in the medieval time-series, such as 1315?C1335 and 1360?C1375, would have proved disruptive.     

Palynology of Archean microfossils (c. 3.0 Ga) from the Mount Grant area, Pilbara Craton, Western Australia: Further evidence of biogenicity

Palynological techniques have only rarely been applied to Archean rocks, mainly because of concerns about contamination. However, where microstructures are abundant and well documented, palynology can add considerably to interpretations based on thin-section examination. A modified palynological preparation method, which avoids vigorous physical or chemical methods that might cause the fragmentation of fragile specimens, was applied to black chert from the c. 3.0 Ga Farrel Quartzite of the Mount Grant area, Pilbara Craton, Western Australia, known to contain abundant microstructures of putative biogenic origin.Four main morphological types have been reported from chert thin sections: threads, films, hollow spheres and spindles. These microstructures exhibit morphological and chemical signatures consistent with a biological origin as well as showing features indicative of taphonomic degradation. Nevertheless, the possibility remains that they are artefacts. Similar structures have been attributed to physical processes, such as the accretion of fine particulate matter that has subsequently been redistributed as a result of crystal growth.By extracting structures palynologically, we have increased the probability of a biogenic origin. Firstly, examination of the morphology free of the encompassing matrix demonstrates that they are indeed three-dimensional structures with complex morphology; secondly, the extraction of entire specimens militates against them being particulate matter aggregations, which would simply disintegrate during preparation and thirdly, the chemicals used remove silicates and most other minerals, confirming the organic composition of the structures. To date, we have extracted films, hollow spheres and a few poorly preserved spindles, but preparation continues. The fact that the specimens retain their morphological integrity during palynological extraction argues strongly in favour of a biogenic origin for the microstructures.     

Effects of restricted recharge in an urban karst system

Urban karst systems are typically considered more vulnerable to contamination and excess storm discharge because of potential source areas, increased sediment loading, and focusing of water from impervious surfaces. However, urban hydrology can lead to unexpected patterns, such as pirating of recharge into man-made storm systems. Valley Creek Basin in southeastern Pennsylvania, presents such an urban karst system. Four springs were monitored for suspended sediment, water chemistry, and storm response for an 18-month period. The baseflow suspended sediment concentrations were low, less than 4.0 mg/l. Furthermore, trace metal analysis of baseflow water samples and spring mouth sediment showed only low concentrations. The response to storms within the system was rapid, on the order of 1–3 h. The maximum water stage increases at the urban springs were typically less than 15 cm, with springs from more commercialized areas showing <2 cm increase. A nearby retention basin, in contrast, had water level rises of 100 cm, suggesting that pirating of recharge into stormwater systems occurs. Thus, the concept of an urban karst system as a contaminant conduit is not the only one that applies. In Valley Creek Basin, reduced infiltration due to paving led to smaller storm response and less contaminant input, and the smaller capture area due to diversion of stormwater led to short flow paths and rapid storm response. Although contaminant levels have not increased due to urbanization, the springs may be at risk for future contamination. Short flow paths may reduce flushing, which means that the system will not cleanse itself if contamination occurs.