Analysis of genetic diversity and differentiation of seven stocks of Litopenaeus vannamei using microsatellite markers

Seven microsatellite markers were used to evaluate the genetic diversity and differentiation of seven stocks of Litopenaeus vannamei, which were introduced from Central and South America to China. All seven microsatellite loci were polymorphic, with polymorphism information content(PIC) values ranging from 0.593 to 0.952. Totally 92 alleles were identified, and the number of alleles(Na) and effective alleles(Ne) varied between 4 and 21 and 2.7 and 14.6, respectively. Observed heterozygosity(Ho) values were lower than the expected heterozygosity(He) values(0.526–0.754), which indicated that the seven stocks possessed a rich genetic diversity. Thirty-seven tests were detected for reasonable significant deviation from Hardy-Weinberg equilibrium. Fis values were positive at five loci, suggesting that there was a relatively high degree of inbreeding within stocks. Pairwise Fst values ranged from 0.0225 to 0.151, and most of the stock pairs were moderately differentiated. Genetic distance and cluster analysis using UPGMA revealed a close genetic relationship of L. vannamei between Pop2 and Pop3. AMOVA indicated that the genetic variation among stocks(11.3%) was much lower than that within stocks(88.7%). Although the seven stocks had a certain degree of genetic differentiation and a rich genetic diversity, there is an increasing risk of decreased performance due to inbreeding in subsequent generations.     

凡纳滨对虾(Litopenaeus vannamei)Runt转录因子的基因克隆及其功能分析

Runt结构域转录因子家族(Runx)在哺乳动物体内存在三种基因型,分别起着造血,骨生成和控制上皮细胞增殖的作用。本文应用反转录和c DNA末端快速扩增(RACE)技术,首次在凡纳滨对虾(Litopenaeus vannamei)中克隆并测序了一种Runt(lvrunt)基因全长。lvrunt c DNA全长1754bp,含有1个663bp长的开放阅读框,编码221个氨基酸,理论分子量为23.6k Da,具有Runt-family结构域。对凡纳滨对虾鳃、肠、肝胰腺、类淋巴、心脏、肌肉组织和血淋巴lvrunt的转录特征进行分析,结果显示该基因几乎特异性地在血淋巴细胞中表达,而在其他组织中表达较低。肌肉注射重组造血激素蛋白(r AST)或白斑综合征病毒(WSSV)粗提液均可显著提高lvrunt在凡纳滨对虾体内的转录表达。上述结果提示,lvrunt主要在血细胞发挥作用,可能作为造血激素的下游基因起到调节血细胞增殖和分化的作用,并在受到病毒感染后,参与提升血细胞数量或者促进血细胞分化的过程。     

急性低氧胁迫对卵形鲳鲹选育群体血液生化指标的影响

本文研究了水环境急性低氧胁迫对卵形鲳鲹Trachinotus ovatus选育群体血液生化指标的影响。实验设计了急性低氧试验组和对照组,每组3个平行。结果显示,急性低氧胁迫后选育群体的血清离子含量与对照组相比都有不同程度的升高,其中钠、氯、钙浓度与对照组相比差异显著(p0.05),铁浓度极显著高于对照组(p0.01);血清蛋白、尿酸、肌酐、血脂、血糖等指标的差异较大,其中尿酸、肌酐极显著高于对照组(p0.01),总蛋白、总胆固醇显著低于对照组(p0.05);血清中肌酸激酶含量极显著高于对照组(p0.01),肌酸激酶同工酶显著高于对照组(p0.05),γ-谷氨酰转肽酶含量显著低于对照组(p0.05);其他指标均有不同程度的升高或降低,但差异不显著。研究表明,急性低氧胁迫造成卵形鲳鲹鳃、肾、心脏和肝脏损伤,免疫力下降。     

始新统油气系统:泰国湾东北部油气勘探新层系

泰国湾区域经历了前裂谷期、裂谷期、裂后期的构造演化阶段,形成了多个裂谷盆地。泰国湾区域东北部在渐新世经历了一次明显构造反转,较泰国湾区域大部分地区强烈。通过对比区内钻井,结合地震解释,对该区的沉积特征和构造演化进行了分析,认为这次反转构造导致了反转构造带上构造、沉积特征与邻区有较大的不同。由于这次反转构造,泰国湾东北部在新层系发育新类型的油气系统,即深部的始新统油气系统:烃源岩为中始新统湖相泥岩,储层为上始新统-渐新统三角洲相砂岩,盖层为下中新统三角洲前缘相泥岩和上中新统以上的海相泥岩。该油气成藏系统已被钻井钻遇油气显示,是本区有效油气成藏系统。     

渤海莱州湾地区晚更新世以来有孔虫特征反映的古环境变化

Controlled by climate changes, there were three large-scale transgressions and regressions around the Bohai Sea during the late Quaternary, which were accepted by most geologists. However, a big controversy still exists about the time when the transgressions occurred separately. In order to find out the process of the paleoenvironmental changes around the Bohai Sea in the late Quaternary, the foraminifera assemblages from a new borehole Lz908 in the southern coast of the Laizhou Bay were studied, and then the transgressive strata were indentified. Combined with accelerator mass spectrometry radiocarbon 14C（AMS14C） and optically stimulated luminescence（OSL） ages, the occurrence time of these transgressions were re-determined. The result showed that three major large-scale transgressions occurred separately at the beginning of marine isotopic stage 7（MIS7）, the last interglacial period（MIS5） and the Holocene. In addition, a small-scale transgression occurred in the mid-MIS6, and the corresponding transgressive stratum was deposited. The transgressive deposition of MIS3 was also discovered in this study. However, the characteristics of the foraminifera indicated the environment during this period was colder than that in the MIS5. By comparison with the global sea-level changes, the paleoenvironmental changes around the Bohai Sea in the late Quaternary can be consistent with the global climate changes.     

Genetic parameter estimation for juvenile growth and upper thermal tolerance in turbot (Scophthalmus maximus Linnaeus)

Twenty-six half-sib groups(53 full-sib families) of turbot, Scophthalmus maximus Linnaeus, were obtained by artificial insemination. We measured growth in the offspring(40–50 individuals/family) and subjected them to a thermal tolerance challenge over a period of 34 d. There was no significant difference in daily mortality(range: 0.580%–1.391%) between Days 1–13 during the thermal tolerance challenge. However, daily cumulative mortality increased rapidly between Days 14 and 29, especially on Days 15 and 16(20.232% and 34.377%, respectively). Mortality was highest on Day 16(14.145%). We estimated the genetic parameters using the average information restricted maximum likelihood method. We used a likelihood ratio test to evaluate the significance of effects in models with and without identity as an effect, and compared the final log-likelihoods(maximum log L). Lastly, we estimated phenotypic and genetic correlation between the upper thermal tolerance limit(UTT) and body weight(BW). In this study, the positive phenotypic correlation was low between UTT and BW(0.093±0.029). The genetic correlation between UTT and BW was negative(-0.044±0.239). The heritability for upper thermal tolerance was low(0.087±0.032), which is of approximately moderate heritability. The heritability for body weight was high(0.303±0.074). Our results suggest there is significant potential for improvement in the culture of turbot by selective breeding.     

不同浓度苯并（a）芘对杂色鲍抗氧化酶活性的影响

为阐释不同浓度苯并（a）芘[B（a）P]对杂色鲍（Haliotis diversicolor）的毒性效应,以0.02、0.04和0.08 mg/dm^33个质量浓度的B（a）P对杂色鲍进行水体暴露胁迫,7d后检测肌肉、外套膜、鳃、性腺、肾和肝胰腺的超氧化物歧化酶（SOD）、过氧化氢酶（CAT）、谷胱甘肽S-转移酶（GST）和谷胱甘肽过氧化物酶（GPx）活性及还原型谷胱甘肽（GSH）含量.结果显示：0.02 mg/dm^3的B（a）P暴露对杂色鲍抗氧化系统的影响不明显,而0.04、0.08 mg/dm^3的B（a）P则显著抑制了SOD、CAT和GPx酶活性以及GSH含量,同时对GST酶活性具有显著的诱导作用;实验还发现,不同组织抗氧化酶活性对B（a）P胁迫的敏感性响应存在较大差异,其中鳃、肾脏和肝胰腺的敏感性响应明显高于肌肉和外套膜.上述结果表明,苯并（a）芘暴露对杂色鲍抗氧化酶活性的影响具有明显的剂量-效应关系及组织差异性,杂色鲍的鳃、肾脏或者肝胰腺的抗氧化酶响应多环芳香烃胁迫的更敏感,可作为B（a）P污染的生物标志物.     

应用样条插值提高GRAPES模式物理过程反馈精度

GRAPES (Global/Regional Assimilation and PrEdiction System) 模式动力框架中垂直方向变量的跳层设置采用Charney-Phillips分布,在整层上进行位温、水物质的计算,物理过程中在半层上对其进行处理。这样在GRAPES模式中,进入物理过程之前和物理过程计算完毕之后,都要采用线性插值进行整层和半层之间物理量的转换。由于线性插值精度欠佳,为提高上述反馈过程的精度,并保证水物质的正定性,该研究引入样条插值,并在水物质的插值过程中进行保单调处理,有效减小了位温场、水物质场的预报偏差,并提升了模式的综合预报性能。     

Signal acquisition of Luojia-1A low earth orbit navigation augmentation system with software defined receiver

Low Earth Orbit (LEO) satellite navigation signal can be used as an opportunity signal in the case of a Global Navigation Satellite System (GNSS) outage, or as ...     

Long-term polar motion prediction using normal time–frequency transform

This paper presents normal time–frequency transform (NTFT) application in harmonic/quasi-harmonic signal prediction. Particularly, we use the normal wavelet transform (a special NTFT) to make long-term polar motion prediction. Instantaneous frequency, phase and amplitude of Chandler wobble, prograde and retrograde annual wobbles of Earth’s polar motion are analyzed via the NTFT. Results show that the three main wobbles can be treated as quasi-harmonic processes. Current instantaneous harmonic information of the three wobbles can be acquired by the NTFT that has a kernel function constructed with a normal half-window function. Based on this information, we make the polar motion predictions with lead times of 1 year and 5 years. Results show that our prediction skills are very good with long lead time. An abnormality in the predictions occurs during the second half of 2005 and first half of 2006. Finally, we provide the future (starting from 2013) polar motion predictions with 1- and 5-year leads. These predictions will be used to verify the effectiveness of the method proposed in this paper.