Experimental analysis of recruitment patterns of coral reef fishes in seagrass beds: Effects of substrate type, shape, and rigidity

Habitat choice of reef fish larvae at settlement is one of the mechanisms proposed to explain spatial patterns in the distribution of fishes and the corresponding spatial structure of communities. Field experiments using Pomacentridae were conducted at Iriomote Island, southern Japan, in order to determine if rare recruitment of coral reef fishes in seagrass beds is due to larval settlement preference. When three types of natural patch treatments (branching coral patch, seagrass patch, and control without patches) were established in cleared seagrass squares in the center of a seagrass bed, four pomacentrid species, Amblyglyphidodon curacao, Dischistodus prosopotaenia, Cheiloprion labiatus, and Dascyllus aruanus, recruited exclusively onto the coral patches, indicating that larvae distributed in the seagrass bed may have preferred a coral rather than seagrass substrate as a settlement habitat. The effects of differences in physical shape (grid structure for branching coral vs. vertical structure for seagrass leaves) and rigidity (rigid substrate for coral vs. flexible substrate for seagrass) between coral and seagrass substrates on such recruitment patterns were investigated using artificial coral and seagrass units. When artificial habitat units with predator exclusion cages were established in the cleared seagrass squares as above, high densities of A. curacao and D. prosopotaenia recruits were observed on the rigid rather than flexible habitat units (both unit types having similar shape), whereas differences in recruit numbers of the two species were unclear in differently shaped units. These results demonstrated that even though pomacentrid larvae are distributed in the seagrass bed, they do not settle on the seagrass substrate owing to their habitat choice being partially based on a preference for substrate rigidity. Moreover, non-recruitment of C. labiatus and D. aruanus on artificial habitat units suggested that the presence of living coral substrates rather than physical shape/rigidity of substrates are an important cue for habitat choice of these fishes.     

Overview of NOPACCS (Northwest Pacific Carbon Cycle Study)

The Northwest Pacific Carbon Cycle Study (NOPACCS) was a program aimed at investigating the carbon cycle of the North Pacific Ocean, which can be thought of as a large reservoir of carbon dioxide. NOPACCS was also aimed at estimating the North Pacific's capacity as a carbon sink. Project design, scientific results, and data availability, and subsequent projects resulting from this project are also described in this review. Studies of the upper ocean processes focused on the latitudinal differences in the fugacity of carbon dioxide; and on the detail of plankton community structures. Intermediate water was studied in relation to the formation of North Pacific Intermediate Water and the amount of accumulated anthropogenic carbon. The sedimentation process, past carbon cycle and coral reefs were also studied during the project. A preliminary, overall view of the carbon cycle of the North Pacific was drawn from the results of the project and compared to global values.     

Simultaneous Measurement of Hydrogen Peroxide and Fe Species (Fe(II) and Fe<Subscript>(tot)</Subscript>) in Okinawa Island Seawater: Impacts of Red Soil Pollution

The northern part of Okinawa Island suffers from red soil pollution—runoff of red soil into coastal seawater—which damages coastal ecosystems and scenery. To elucidate the impacts of red soil pollution on the oxidizing power of seawater, hydrogen peroxide (HOOH) and iron species including Fe(II) and total iron (Fe_(tot), defined as the sum of Fe(II) and Fe(III)) were measured simultaneously in seawater from Taira Bay (red-soil-polluted sea) and Sesoko Island (unpolluted sea), off the northern part of Okinawa Island, Japan. We performed simultaneous measurements of HOOH and Fe(II) because the reaction between HOOH and Fe(II) forms hydroxyl radical (•OH), the most potent environmental oxidant. Gas-phase HOOH concentrations were also measured to better understand the sources of HOOH in seawater. Both HOOH and Fe(II) in seawater showed a clear diurnal variation, i.e. higher in the daytime and lower at night, while Fe_(tot) concentrations were relatively constant throughout the sampling period. Fe(II) and Fe_(tot) concentrations were approximately 58% and 19% higher in red-soil-polluted seawater than in unpolluted seawater. Gas-phase HOOH and seawater HOOH concentrations were comparable at both sampling sites, ranging from 1.4 to 5.4 ppbv in air and 30 to 160 nM in seawater. Since Fe(II) concentrations were higher in red-soil-polluted seawater while concentrations of HOOH were similar, •OH would form faster in red-soil-polluted seawater than in unpolluted seawater. Since the major scavenger of •OH, Br⁻, is expected to have similar concentrations at both sites, red-soil-polluted seawater is expected to have higher steady-state •OH concentrations.     

Changes in magnetic and fractal properties of fractured granites near the Nojima Fault, Japan

Abstract Anisotropy of magnetic susceptibility (AMS) has been used to infer finite strain fabrics in plastically deformed rocks, but there are few studies of magnetic properties in fractured fault rocks. Changes in magnetic and fractal properties of fractured granites from the Disaster Prevention Research Institute, Kyoto University (DPRI) 500 m drilling core towards the Nojima Fault and of the well-foliated fault gouge are described. Fractal analysis of fractured granites shows that the fractal dimension ( D ) increases linearly toward the gouge zone of the fault. In weakly fractured granites ( D = 1.05–1.24), it was found that the degree of AMS correlates positively with the fractal dimension, suggesting a fracture-related magnetic fabric due to fracturing. In strongly fractured granites ( D = 1.25–1.50), weaker, nearly isotropic AMS is found, suggesting erasure by the fragmentation of the magnetic minerals. Within the fault gouge zone, an isotropic AMS fabric was found, as well as twofold increases in magnetic intensity and susceptibility. These changes reflect the production of new magnetite grains, subsequently confirmed by hysteresis studies, which suggests that fault gouge might be regarded as the source of the regional geomagnetic field contrast along active faults. Thus, AMS is clearly a potentially useful tool for inferring the fracturing texture of magnetic minerals in fractured rocks and detecting active faults from the high susceptibility contrast of fault gouge.     

Speciation of Chromium in Artificially Contaminated Soil Reference Material GSJ JSO-2 Using XANES and Chemical Extraction Methods

The oxidation states of chromium in GSJ JSO-2 (artificially contaminated soil) and three other geochemical reference materials (GSJ JSO-1, JLS-1 and JMS-1) were observed using X-ray near edge structure (XANES). For comparison, other artificially contaminated soil materials (mimic-JSO-2) were prepared by adding Cr(VI) into JSO-1. Their oxidation states of chromium were determined using XANES. The chromium contents were 1118 μg g^-1 for JSO-2, 1352 μg g^-1 for mimic-JSO-2 and 69-113 μg g^-1 for the other reference materials. Most chromium was present as hexavalent in mimic-JSO-2. No hexavalent species were detected in other samples. These results for chromium oxidation state in JSO-2 and mimic-JSO-2 obtained with XANES resembled those obtained from a chemical extraction method. The present JSO-2 has no trace of Cr(VI), although Cr(VI) was added as a major species during preparation. On the other hand, the content of Cr(VI) obtained in mimic-JSO-2 agreed with the original Cr(VI) content. A time-elapse study showed that Cr(VI) contents in mimic-JSO-2 decreased gradually to 70% of the original abundance during 240-day preservation in dry conditions. Moreover, the abundance of Cr(VI) decreased markedly to 15% after 240 days in the wet mimic-JSO-2 containing 20% m/m of water. These experiments suggested that soil humidity enhanced the reduction of Cr(VI) and that Cr(VI) was reduced even in dry conditions. Consequently, it is reasonable to infer that Cr(VI) doped into JSO-2 was completely reduced to Cr(III) during the preservation period of 5 years. The certification of the long-term stability of the chemical form in reference materials will be much more important in future.     

Middle Miocene to Quaternary primary basalt and high magnesian andesite magmas of North Hokkaido, Japan: Source mantle characteristics and degrees of partial melting

Abstract   Middle Miocene to Quaternary primitive basalts and high magnesian andesite (HMA) in North Hokkaido resulted from three periods of intense volcanism; early-stage (12–10 Ma), middle-stage (9–7 Ma) and late-stage (3–0 Ma). Based on the chemical compositions of olivines and chromian spinels and bulk chemistry of the primitive rocks, we examined depths of segregation of the calculated primary magmas and the degrees of partial melting of the source mantle. In the context of asthenospheric mantle upwelling, petrological data from the present study can be accounted for by the secular change in the depth of magma segregation from the upwelled asthenospheric mantle, which is composed of fertile peridotite. Thus, the early-stage primary magmas were generated by higher degrees of partial melting of the shallower part of hot asthenospheric mantle, whereas the middle- and late-stage primary magmas resulted from lower degrees of partial melting of a deeper part of the asthenospheric mantle. The early-stage HMA magma was generated by partial melting of the remnant subcontinental lithospheric mantle composed of refractory peridotite. This melting might have resulted from an increased geothermal gradient caused by upwelling of hot asthenosphere.     

Geochemical characteristics of Tertiary Sagara oil from an active forearc basin, Shizuoka, Japan

Abstract   The Sagara oil field is located in the Neogene Kakegawa Basin, close to the Izu collision zone at the junction between the main Japanese Islands and the Izu–Bonin Arc. The Sagara oil field is one of the few oil fields situated in a forearc basin on the Pacific side of Japan and is present in a sedimentary basin with poor oil-generating potential. Several crude oils from Sagara oil field were investigated to infer their origin. Organic geochemical characteristics of Sagara oils showed the influences of light biodegradation, migration-contamination, and migration-fractionation. The maturity levels of Sagara oils evaluated based on abundant alkylnaphthalenes corresponded to 0.9–1.2% vitrinite reflectance. Sagara oils were characterized by significant amounts of higher plant biomarkers, a high pristane/phytane ratio and an absence of organic sulphur compounds, suggesting a siliciclastic source rock deposited under nearshore to fluvial–deltaic environments. Numerous faults and fractures in the active forearc basin provided excellent conduits and facilitated upward migration of light hydrocarbons generated at greater depth in the Kakegawa Basin.     

Short-range prediction experiments of the Kuroshio path variabilities south of Japan

Assimilation and prediction experiments of the Kuroshio path variability south of Japan were conducted to investigate the predictability of the Kuroshio path. The assimilation and prediction system is composed of an eddy-resolving model and a three-dimensional variational analysis scheme with vertical coupled temperature–salinity empirical orthogonal function modes. The sea surface height (SSH) variability and the variations of the Kuroshio path of the assimilation fields are in good agreement with those observed. The results of the assimilation are then used as the initial conditions for 138 cases of 90-day prediction experiments conducted from 1993 to 2004. The predictive limit of our system is assessed by the SSH anomaly in the assimilation field and is found to be around 40–60 days, which is much longer than that of the persistence. The prediction results show good performance in the transition stage from a straight to a meandering path. For example, a large meandering event that occurred in August 2004 is successfully predicted in a 2-month forecast. Two types of failure cases are investigated. One is a case where the eastward propagation speed of the meander is faster than a real state. The dynamical response of the model to the assimilation revealed that an initial shock, caused by the dynamically unbalanced initial condition, induces the fast eastward propagation of the meander. The other case exhibits an unrealistic meander. In this case, a cold anomaly at an intermediate layer in the initial condition grows rapidly and results in the unrealistic meander. This implies that the Kuroshio path south of Japan has a chaotic nature. These facts revealed by the failure cases give us some insight for improving the predictive skill of the Kuroshio path variability.     

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