Population structure of two deep sea tubeworms,Lamellibrachia luymesi and Seepiophila jonesi,from the hydrocarbon seeps of the Gulf of Mexico

Vestimentiferan tubeworms are a group of large sessile marine polychaete annelids (family Siboglinidae) found in the regions of hydrothermal venting or seepage of the reduced chemical hydrogen sulfide. Hydrocarbon seeps on the Louisiana Slope of the Gulf of Mexico support large communities of the co-occurring vestimentiferan species Lamellibrachia luymesi and Seepiophila jonesi. These sessile species have the opportunity to disperse between the patchy sites of active seepage on the seafloor during a planktonic larval stage. However, it is unclear whether dispersal occurs at a local or global scale. Four (L. luymesi) and seven (S. jonesi) microsatellite loci were used to test for population substructure among ten hydrocarbon seep sites on the Louisiana Slope. Both species showed high levels of allelic diversity, averaging 18.5 (L. luymesi) and 22 (S. jonesi) alleles/locus, respectively, and high observed heterozygosity at all microsatellite loci (0.71–0.9 in L. luymesi, 0.27–0.84 in S. jonesi). The two species showed a significant deficiency in heterozygotes compared to that predicted under the Hardy–Weinberg equilibrium. L. luymesi showed a small but significant amount of population structure, with a positive correlation between genetic and geographic distance among the sample sites spanning 540 km. S. jonesi, in contrast, showed no evidence for isolation by distance, but did show a significant genetic difference between aggregations of different ages. These results suggest that these two species differ in how larvae are able to colonize new seep sites through space (L. luymesi) and though time (S. jonesi).     

Metal concentrations in sediments and clams in four Moroccan estuaries

Metals (Cd, Cu, Ni, Zn, Mn and Fe) were analyzed seasonally over three years in sediments and in tissues of the clam Scrobicularia plana in four Moroccan Atlantic estuaries: Loukkos, Sebou, Bou Regreg and Oum er Rbia. Of these metals, Cd was at the lowest concentrations in sediment. Concentrations of Cu, Zn, and to a lesser extent Ni, in sediments suggest greater contamination in Sebou and Bou Regreg than in the other estuaries. The fluctuations of Mn and Fe concentrations in the fine surface sediments reflect their continental origin and show seasonal variations that indicate soil run-off following rain events. Concentrations of Cu, Zn, and especially Ni in clam tissues in these estuaries were generally higher than in some other common bioindicator bivalve species. The seasonal variations in S. plana's tissue metal concentrations are linked to patterns of reproductive activity for all metals except Cd and possibly Zn, whose tissue concentrations may be regulated. Mn and Fe concentrations in S. plana were positively correlated to sediment levels of these metals.     

Reynolds stress and TKE production in an estuary with a tidal bore

We report new measurements of the turbulent properties of the flow in a tidally energetic estuarine channel of almost uniform cross-section. A high-frequency (1.2 MHz), bottom-mounted Acoustic Doppler Current Profiler (ADCP) has been used to observe the velocity field at a sampling rate of 10 Hz in parallel with measurements of the surface elevation by tide gauges. Our data have been analysed using the Variance Method to determine turbulent kinetic energy (TKE), shear stress and TKE production over the tidal cycle with a time resolution of 60 s. During the highly energetic but brief flood period, when the surface axial velocity reaches 2 m s⁻¹, we observed large values of stress (>2 Pa) and shear production (5 W m⁻³). TKE is also input through the release of energy in the bore itself which results in a brief but intense injection of energy at the bore front with large transient TKE levels (100 J m⁻³). Subsequent input by shear production maintains TKE levels which are generally lower (20 J m⁻³) than the strong peak associated with the bore for the rest of the flood. On the ebb, the flow is relatively tranquil with maximum speeds 0.5 m s⁻¹ and peak TKE production rates of 0.1 W m⁻³.The flow and elevation data have also been used to estimate the energy fluxes into and out of the estuary. Short (1 h), intense energy inputs (8 MW at springs) on the flood flow are largely balanced by longer, less intense seaward energy flow on the ebb. The net energy input is found to be 0.1 MW at springs which is consistent with estimates of upstream dissipation. Peak dissipation in the bore itself may exceed the mean energy input but it is active only for a small fraction of the tidal cycle and its average contribution does not exceed 12% of total dissipation.     

Market access,population density,and socioeconomic development explain diversity and functional group biomass of coral reef fish assemblages

There is overwhelming evidence that many local-scale human activities (e.g. fishing) have a deleterious effect on coral reef fish assemblages. Our understanding of how broad social phenomena (e.g. socioeconomic development) affect the diversity and function of coral reef fish assemblages however, is still poor. Here, we use structural equation models to reveal how human population density, socioeconomic development, and market access affect fishing pressure and coral cover to, in turn, explain the diversity and biomass of key functional groups of reef fish assemblages within Solomon Islands. Fishing pressure is predominantly driven by both market access and local population density, and has a clear negative effect on the diversity and function of coral reef fishes. The strong positive effect of market access on fishing pressure makes clear the importance of understanding social-ecological linkages in the context of increasingly connected societies. This study highlights the need to address broad social phenomena rather than focusing on proximate threats such as fishing pressure, to ensure the continued flow of coral reef goods and services in this time of rapid global social and environmental change.     

Palaeo-environmental and dietary analysis of intestinal contents of a mammoth calf (Yamal Peninsula,northwest Siberia)

Intestinal samples from the one-month-old Siberian mammoth calf ‘Lyuba’ were studied using light microscopy and ancient DNA to reconstruct its palaeo-environment and diet. The palynological record indicates a ‘mammoth steppe’. At least some pollen of arboreal taxa was reworked, and thus the presence of trees on the landscape is uncertain. In addition to visual comparison of 11 microfossil spectra, a PCA analysis contributed to diet reconstruction. This yielded two clusters: one of samples from the small intestine and the other of large-intestine samples, indicating compositional differences in food remains along the intestinal tract, possibly reflecting different episodes of ingestion. Based on observed morphological damage we conclude that the cyperaceous plant remains and some remains of dwarf willows were originally eaten by a mature mammoth, most likely Lyuba’s mother. The mammoth calf probably unintentionally swallowed well-preserved mosses and mineral particles while eating fecal material deposited on a soil surface covered with mosses. Coprophagy may have been a common habit for mammoths, and we therefore propose that fecal material should not be used to infer season of death of mammoths. DNA sequences of trnL and rbcL genes amplified from ancient DNA extracted from intestinal samples confirmed and supplemented plant identifications based on microfossils and macro-remains. Results from different extraction methods and barcoding markers complemented each other and show the value of longer protocols in addition to fast and commercially available extraction kits.     

Mt. Pelée, martinique: may 8 and 20, 1902, pyroclastic flows and surges

The distribution, stratigraphic relationships and fragmental components of the May 8 and 20, 1902, pyroclastic flows from Mt. Pelée, Martinique, together with eyewitness accounts, suggest the following explanation for those eruptions. The eruptions were vertically directed magmatic (perhaps initiated phreatically), and contained abundant juvenile lithics from congealed magma of the dome and neck. This resulted in a two-part eruption column having (1) a dense, lithic-charged part which collapsed into the crater and flowed out of a pre-existing notch in its side, giving rise to pyrochlastic flows, and (2) a magmatically derived column containing gases, juvenile vitric material and crystals which largely by-passed the neck and dome and escaped into the atmosphere. All of the energy of the flows was apparently focused through the notch. They emerged fully turbulent and flowed down Rivière Blanche. Gravity segregation of large and abundant fragments soon resulted in a dense, high-concentration, poorly fluidized block-and-ash flow confined to the valley, leaving above a fully turbulent, high-energy ash-cloud surge. As the ash-cloud surge moved down the mountain, it continued to expand outward. The process of gravity segregation continued as the ash-cloud surge expanded, resulting in secondary block-and-ash underflows. Toward St. Pierre, the secondary block-and-ash flows developed on a gently sloping upland surface 100 m or more above the valley of Rivière Blanche. The turbulent, fragment-depleted surges above the secondary block-and-ash flows maintained sufficient energy to devastate the landscape outward to about 3000 m, including St. Pierre. The surges refracted around obstacles and in one place, moved up a small valley in a direction opposite to the main flows.     

Scales of nutrient-limited phytoplankton productivity in Chesapeake Bay

The scales on which phytoplankton biomass vary in response to variable nutrient inputs depend on the nutrient status of the plankton community and on the capacity of consumers to respond to increases in phytoplankton productivity. Overenrichment and associated declines in water quality occur when phytoplankton growth rate becomes nutrient-saturated, the production and consumption of phytoplankton biomass become uncoupled in time and space, and phytoplankton biomass becomes high and varies on scales longer than phytoplankton generation times. In Chesapeake Bay, phytoplankton growth rates appear to be limited by dissolved inorganic phosphorus (DIP) during spring when biomass reaches its annual maximum and by dissolved inorganic nitrogen (DIN) during summer when phytoplankton growth rates are highest. However, despite high inputs of DIN and dissolved silicate (DSi) relative to DIP (molar ratios of N∶P and Si∶P>100), seasonal accumulations of phytoplankton biomass within the salt-intruded-reach of the bay appear to be limited by riverine DIN supply while the magnitude of the spring diatom bloom is governed by DSi supply. Seasonal imbalances between biomass production and consumption lead to massive accumulations of phytoplankton biomass (often>1,000 mg Chl-a m^?2) during spring, to spring-summer oxygen depletion (summer bottom water <20% saturation), and to exceptionally high levels of annual phytoplankton production (>400 g m^?2 yr^?1). Nitrogen-dependent seasonal accumulations of phytoplankton biomass and annual production occur as a consequence of differences in the rates and pathways of nitrogen and phosphorus cycling within the bay and underscore the importance of controlling nitrogen inputs to the mesohaline and lower reaches of the bay.     

Dispersion of the salt-marsh periwinkle Littoraria irrorata: Effects of water level,size, and season

This paper documents horizontal and vertical dispersion patterns of a Texas population of the saltmarsh periwinkle, Littoraria irrorata, over a 15-month period. The study was conducted within a tidal marsh on the Anahuac National Wildlife Refuge in Galveston Bay. Two mark-recapture experiments demonstrated that L. irrorata rarely move more than 2 m from their release point over long periods of time and do not home to individual Spartina plants. Adult L. irrorata forage farther away from the base of Spartina stalks at low tide than do juvenile snails. Remaining near the plant base may decrease both temperature and desiccation stress on juveniles. During warm months, L. irrorata climb grass stalks with tidal inundation and forage on the substratum at low tide. Snails are inactive and aggregate in detrital debris at the base of Spartina clumps during the winter. *** DIRECT SUPPORT *** A01BY058 00016