Correction method for full-depth current velocity with lowered acoustic Doppler current profiler (LADCP)

A new method is presented to process and correct full-depth current velocity data obtained from a lowered acoustic Doppler current profiler (LADCP). The analysis shows that, except near the surface, the echo intensity of a reflected sound pulse is closely correlated with the magnitude of the difference in vertical shear of velocity between downcast and upcast, indicating an error in velocity shear. The present method features the use of echo intensity for the correction of velocity shear. The correction values are determined as to fit LADCP velocity to shipboard ADCP (SADCP) and LADCP bottom-tracked velocities. The method is as follows. Initially, a profile of velocity relative to the sea surface is obtained by integrating vertical shears of velocity after low-quality data are rejected. Second, the relative velocity is fitted to the velocity at 100–800 dbar measured by SADCP to obtain an “absolute” velocity profile. Third, the velocity shear is corrected using the relationship between the errors in velocity shears and echo intensity, in order to adjust the velocity at sea bottom to the bottom-tracked velocity measured by LADCP. Finally, the velocity profile is obtained from the SADCP-fitted velocity at depths less than 800 dbar and the corrected velocity shear at depths greater than 800 dbar. This method is valid for a full-depth LADCP cast throughout which the echo intensity is relatively high (greater than 75 dB in the present analysis). Although the processed velocity may include errors of 1–2 cm s⁻¹, this method produced qualitatively good current structures in the Northeast Pacific Basin that were consistent with the deep current structures inferred from silicate distribution, and the averaged velocities were significantly different from those calculated by the Visbeck (2002) method.     

Effects of cold eddy on phytoplankton production and assemblages in Luzon strait bordering the South China Sea

The biochemical effects of a cold-core eddy that was shed from the Kuroshio Current at the Luzon Strait bordering the South China Sea (SCS) were studied in late spring, a relatively unproductive season in the SCS. The extent of the eddy was determined by time-series images of SeaWiFS ocean color, AVHRR sea surface temperature, and TOPEX/Jason-1 sea surface height anomaly. Nutrient budgets, nitrate-based new production, primary production, and phytoplankton assemblages were compared between the eddy and its surrounding Kuroshio and SCS waters. The enhanced productivity in the eddy was comparable to wintertime productivity in the SCS basin, which is supported by upwelled subsurface nitrate under the prevailing Northeastern Monsoon. There were more Synechococcus, pico-eucaryotes, and diatoms, but less Trichodesmium in the surface water inside the eddy than outside. Prochlorococcus and Richelia intracellularis showed no spatial differences. Water column-integrated primary production (IPP) inside the eddy was 2–3 times that outside the eddy in the SCS (1.09 vs. 0.59 g C m⁻²d⁻¹), as was nitrate-based new production (INP) (0.67 vs. 0.25 g C m⁻²d⁻¹). INP in the eddy was 6 times that in the Kuroshio (0.12 g C m⁻²d⁻¹). IPP and INP in the eddy were higher than the maximum production values ever measured in the SCS basin. Surface chlorophyll a concentration (0.40 mg m⁻³) in the eddy equaled the maximum concentration registered for the SCS basin and was higher than the wintertime average (0.29 ± 0.04 mg m⁻³). INP was 3.5 times as great and IPP was doubled in the eddy compared to the wintertime SCS basin. As cold core eddies form intermittently all year round as the Kuroshio invades the SCS, their effects on phytoplankton productivity and assemblages are likely to have important influences on the biogeochemical cycle of the region.     

Mapping QTLs of caudal fin length in common carp (Cyprinus carpio L.)

Common carp (Cyprinus carpio L.) exhibits significant morphological variability in the shape and size of the caudal fin. In this study, we used 190 progeny from two F₁ parents to identify and map quantitative trait loci (QTLs) that influence caudal fin length (CFL) and the ratio (RCS) between caudal fin length and standard length (SL) based on a microsatellite genetic map of common carp. A total of 15 QTLs were detected in seven different linkage groups. One significant and eight suggestive QTLs affecting CFL were identified on LG8, LG14, LG29, LG32 and LG44, which explained 8.0%–22.1% of the phenotypic variation; six suggestive QTLs affecting RCS were detected on LG8, LG32, LG46 and LG48, which explained 7.0%–15.4% of the phenotypic variation. The QTLs for caudal fin length detected in this study may serve as a starting point for identification of genes involved in caudal fin development in common carp.     

黄海中南部近岸海域春季鱼类浮游生物群落空间格局研究

根据2015年春季在黄海中南部近岸海域进行的鱼类浮游生物大型浮游生物网水平拖网数据,采用生态多样性指数和多元统计分析等方法,研究了该海域鱼类浮游生物的种类组成和群落空间格局及其与环境因子的关系。结果表明,本次调查共采集到鱼类浮游生物35种,其中鱼卵21种,仔稚鱼23种。鱼类浮游生物隶属于8目18科34属,优势种为鳀（Engraulis japonicus）、鲬（Platycephalus indicus）、鱼衔属（Callionymus spp.）和小黄鱼（Pseudosciaena polyactis）。其中,鳀和鱼衔属主要分布于海州湾渔场海域,鲬主要分布于吕泗渔场海域,小黄鱼多分布于吕泗渔场北部海域。生态类型包括半咸水型、沿岸型和近海型种类。聚类分析表明,鱼类浮游生物群落可划分为以鱼衔属、鳀为优势种的站位组A（主要分布于海州湾海域）、以小黄鱼、黄鲫（Setipinna taty）等为优势种的站位组B（主要位于江苏沿岸海域）和以鲬为优势种的站位组C（主要位于江苏沿岸-近海海域）,以站位组B的群落物种多样性指数和均匀度指数最高。各站位组的鱼类浮游生物的生态类型和适温类型组成不同,这与其所处的海域生境有关。典范对应分析（CCA）表明,影响春季黄海中南部鱼类浮游生物群落空间结构的主要环境因子为水深和表层温度。同时也受洋流、底质类型等多种因素的综合影响。研究结果初步揭示了黄海中南部近岸海域鱼类浮游生物群落的空间格局,可为今后科学制定该海域水产种质资源保护区、资源量化管理等资源养护管理措施提供科学依据与技术支撑。     

Pore-water geochemistry in methane-seep sediments of the Makran accretionary wedge off Pakistan: Possible link to subsurface methane hydrate

Cold seeps are pervasive along the continental margin worldwide,and are recognized as hotspots for elemental cycling pathway on Earth.In this study,analyses of pore water geochemical compositions of one-400 cm piston core(S3) and the application of a mass balance model are conducted to assess methane-associated biogeochemical reactions and uncover the relationship of methane in shallow sediment with gas hydrate reservoir at the Makran accretionary wedge off Pakistan.The results revealed that approximately 77% of sulfate is consumed by the predominant biogeochemical process of anaerobic oxidation of methane.However,the estimated sulfate-methane interface depth is-400 cm below sea floor with the methane diffusive flux of 0.039 mol/(m~2·a),suggesting the activity of methane seepage.Based on the δ~(13)C_(DIC) mass balance model combined with the contribution proportion of different dissolved inorganic carbon sources,this study calculated the δ~(13)C of the exogenous methane to be-57.9‰,indicating that the exogenous methane may be a mixture source,including thermogenic and biogenic methane.The study of pore water geochemistry at Makran accretionary wedge off Pakistan may have considerable implications for understanding the specific details on the dynamics of methane in cold seeps and provide important evidence for the potential occurrence of subsurface gas hydrate in this area.     

An experimental study on microscopic characteristics of gas-bearing sediments under different gas reservoir pressures

Gas-bearing sediments are widely distributed in five continents all over the world. Most of the gases exist in the soil skeleton in the form of discrete large bubbles. The existence of gas-phase may increase or decrease the strength of the soil skeleton. So far, bubbles’ structural morphology and evolution characteristics in soil skeleton lack research, and the influence of different gas reservoir pressures on bubbles are still unclear. The micro characteristics of bubbles in the same sediment sample were studied using an industrial CT scanning test system to solve these problems. Using the image processing software, the micro variation characteristics of gas-bearing sediments in gas reservoir pressure change are obtained. The results show that the number and volume of bubbles in different equivalent radius ranges will change regularly under different gas reservoir pressure. With the increase of gas reservoir pressure, the number and volume of tiny bubbles decrease. In contrast, the number and volume of large bubbles increase, and the gas content in different positions increases and occupies a dominant position, driving the reduction of pore water and soil skeleton movement.     

基于稳定同位素方法的吕泗渔场近岸海域主要生物潜在碳源及营养级分析

基于稳定同位素方法,对2018年吕泗渔场近岸海域夏季主要生物种类的潜在碳源及其营养级进行分析,利用IsoSource模型计算该海域消费者的3大碳源（浮游植物、悬浮颗粒有机物、底质有机物）贡献值,并比较叠加潜在碳源影响前后主要生物种类的营养级变化。结果表明,浮游植物和底质有机物对37种主要生物种类的贡献比例分别为58.7%和28.2%,而悬浮颗粒有机物的贡献较小。因此判定吕泗渔场近岸海域夏季主要生物种类的潜在碳源主要是浮游植物和底质有机物。通过分别叠加3大潜在碳源和单一物种作为基准值构建两个营养级谱,右营养级谱的生物种类营养级范围为1.74～3.92,比左营养级谱平均下降0.19个营养级,尽管两个营养级谱的整体趋势走向不变,但部分鱼类和多数虾类的营养位置发生改变。右营养级谱的基准值随着潜在碳源叠加比例的不同而变化,能有效反映生物营养级,更适用于低营养级的虾蟹类。但对于处于中高级消费者位置的鱼类来说,这种叠加的效果影响不大。     

Characteristics and origins of middle Miocene mounds and channels in the northern South China Sea

Numerous elongated mounds and channels were found at the top of the middle Miocene strata using 2D/3D seismic data in the Liwan Sag of Zhujiang River Mouth Basin(ZRMB) and the Beijiao Sag of Qiongdongnan Basin(QDNB). They occur at intervals and are rarely revealed by drilling wells in the deepwater areas. Origins of the mounds and channels are controversial and poorly understood. Based on an integrated analysis of the seismic attribute, palaeotectonics and palaeogeography, and drilling well enco...     

Extended Finite Element Method for the Analysis of Discontinuities in Rock Masses

The strength and deformability of rock mass primarily depend on the condition of joints and their spacing and partially on the engineering properties of rock matrix. Till today, numerical analysis of discontinuities e.g. joint, fault, shear plane and others is conducted placing an interface element in between two adjacent rock matrix elements. However, the applicability of interface elements is limited in rock mechanics problems having multiple discontinuities due to its inherent numerical difficulties often leading to non-convergent solution. Recent developments in extended finite element method (XFEM) having strong discontinuity imbedded within a regular element provide an opportunity to analyze discrete discontinuities in rock masses without any numerical difficulties. This concept is based on partition of unity principle and can be used for cohesive rock joints. This paper summarizes the mathematical frameworks for the implementation of strong discontinuities in 3 and 6 nodded triangular elements and also provides numerical examples of the application of XFEM in one and two dimensional problems with single and multiple discontinuities.     

Influence of Environmental Factors on Spawning of the American Horseshoe Crab (<Emphasis Type="Italic">Limulus polyphemus</Emphasis>) in the Great Bay Estuary,New Hampshire,USA

The Great Bay Estuary, New Hampshire, USA is near the northern distribution limit of the American horseshoe crab (Limulus polyphemus). This estuary has few ideal beaches for spawning, yet it supports a modest population of horseshoe crabs. There is no organized monitoring program in the Great Bay Estuary, so it is unclear when and where spawning occurs. In this 2-year study (May through June, 2012 and 2013), >5,000 adult horseshoe crabs were counted at four sites in the estuary. The greatest densities of horseshoe crabs were observed at Great Bay sites in the upper, warmer reaches of the estuary. Peaks of spawning activity were not strongly correlated with the times of the new or full moons, and similar numbers of horseshoe crabs were observed mating during daytime and nighttime high tides. While many environmental factors are likely to influence the temporal and spatial patterns of spawning in this estuary, temperature appears to have the most profound impact.