Analysis of medaka cytochrome P450 3A homotropic and heterotropic cooperativity

We have previously demonstrated that medaka CYP3A is associated with metabolism of several endobiotics including steroids and bile acids. In this study, we demonstrate that medaka CYP3A catalysis exhibits unusual kinetic behaviors consistent with allosteric interaction which cannot be described by hyperbolic kinetic models. Using 7-benzyloxy-4-(trifluoromethyl)-coumarin (BFC) and nonylphenol as CYP3A substrates, we describe both homotropic and heterotropic cooperative interactions. Given the role of CYP3A in maintaining the homeostatic balance for numerous endobiotics, enzymatic activation/inhibition by endocrine disruptors (EDCs) represents a putative (non-genomic) mechanism for endocrine disruption.     

Fluxes and sources of suspended organic matter in an estuarine turbidity maximum region during low discharge conditions

Water column concentrations of total suspended solids (TSS), particulate organic carbon (POC) and particulate nitrogen (PN) were measured at three different depths in four different locations bracketing the estuarine turbidity maximum (ETM) along the main channel of a temperate riverine estuary (Winyah Bay, South Carolina, USA). Measurements were carried out over full tidal cycle (over 24 h). Salinity, temperature, current magnitude and direction were also monitored at the same time throughout the water column. Tidally averaged net fluxes of salt, TSS, POC and PN were calculated by combining the current measurements with the concentration data. Under the extreme low river discharge conditions that characterized the study period, net landward fluxes of salt were measured in the lower part of the study area, suggesting that the landward transport through the main channel of the estuary was probably balanced by export out through the sides. In contrast, the net fluxes of salt in the upper reaches of the study area were near zero, indicating a closed salt balance in this part of the estuary. In contrast to salt, the net fluxes of TSS, POC and PN in the deeper parts of the water column were consistently landward at all four sites in Winyah Bay indicating the non-conservative behavior of particulate components and their active transport up the estuary in the region around the ETM.The carbon contents (%POC), carbon:nitrogen ratios (org[C:N]a) and stable carbon isotopic compositions (δ¹³C_POC) of the suspended particles varied significantly with depth, location and tidal stage. Tidally averaged compositions showed a significant increase up the estuary in the %POC and org[C:N]a values of suspended particles consistent with the preferential landward transport of carbon-rich particles with higher vascular plant debris content. The combination of tidal resuspension and flood-dominated flow appeared to be responsible for the hydrodynamic sorting of particles along the estuary that resulted in denser, organic-poor particles being transported landward less efficiently. The elemental and isotopic compositions indicated that vascular C₃ plants and estuarine algae were the major sources of the particulate organic matter of all the samples, without any significant contributions from salt marsh C₄ vegetation (Spartina alterniflora) and/or marine phytoplankton.     

Numerical Solution of Lock-Release Gravity Current with Viscous Self-Similar Regime

Lock-release gravity currents with a viscous self-similar regime are simulated by use of the renormalization group(RNG) k - ε model for Reynolds-stress closure. Besides the turbulent regime with initially a slumping phase of a conslant current front speed and later an inviseid self-similar phase of front speed decreasing as t^-1/3(where t is the time measured from release), the viseous self-similar regime is satisfactorily reproduced with front speed decreasing as t^-4/5,consistent with well known experimental observations.     

The optimum control of thruster system for dynamically positioned vessels

An offshore vessel with a dynamic positioning system (DP system) needs fast response to produce thrust to counteract the environmental forces acting on it for the purpose of maintaining its position and heading as close as possible to the working position. Therefore, quick and effective modulation of the thrust is the problem to determine the thrust and the rotation angle of the thruster devices of the ship. This paper presents an effective optimum control for a thruster system, using the sequential quadratic method to achieve economical and effective modulation of the thrust and the direction of the thruster. An optimum control study of a 2280 tons DP coring vessel with five rotary azimuth thruster marine positioning is studied in detail, which can quickly and exactly estimate the thrusts and angles of direction of all the thrusters. The results can provide a valuable thruster system for a dynamically positioned vessel.     

The crustal structure of Concepcion Bank

From reflection and refraction data a crustal model of the Concepcion Bank NE of Lanzarote Island has been calculated. It is interpreted as a tectonic unit of volcanic origin. Its evolution history of mainly Tertiary age does not depend on sea floor spreading. The Bank is built of intruded basaltic layers over material with a reduced mantle p-velocity.     

The elemination of re-reflected waves by a porous medium of finite thickness

The elimination of re-reflected waves in a wave channel by installing a porous medium in front of the wavemaker is investigated. The thickness of the porous wall required to eliminate the re-reflected waves is shown to be related to th porosity, friction coefficient, and wave period, as well as to both the positions of the porous medium and the test structure. However, this study indicates that the goal of eliminating re-reflected waves can be achieved by simply varying the thickness of the porous medium according to the wave period, with all the other factors arbitrarily selected.Assuming that the oscillation amplitude of the wavemaker board is constant, the primitive wave amplitude, before reaching the porous medium, becomes smaller as the wave period is increased. In addition, the study found that the required thickness of the porous medium for eliminating the re-reflected wave becomes larger as the wave period is increased. This results in a trend which further reduces the wave amplitude after the wave passes through the porous medium. In consequence, the oscillation amplitude of a wavemaker board has to be adjusted in a larger scale if the wave period is to be increased.     

Turnover of hepatic hemoproteins in rainbow trout

The hepatic mixed function oxidase system in the fish differs from that in mammals in its responses to the two classic mammalian inducers. The cytochrome P-448-type inducers (polycyclic aromatic hydrocarbons) stimulate monooxygenase activity, but phenobarbital, a P-450-type inducer, does not.¹ We have compared the effects of phenobarbital (PB) and polychlorinated biphenyls (PCB) on the turnover of hepatic microsomal hemoproteins in trout (PCB's are P-448- and P-450-type inducers in mammals, which in fish induce only cytochrome P-448). We show here that neither PCB nor PB treatment changed the turnover rate. However, both the rates of synthesis and degradation were much slower than in the rat.     

A Pull-Up Shallow Water Seismometer

An inexpensive Pull-Up Shallow Water Seismometer (PUSS) has been designed and built to conduct long range seismic refraction experiments in the North Sea and the continental shelf around Britain, with the particular goal of studying the crustal and lithospheric structure under the epeirogenic basin of the North Sea. Signals from a gimbal-mounted 3-component geophone and a hydrophone are frequency modulated and mixed with clock and flutter correction signals before being recorded on a standard speed cassette tape recorder, with one hour of recording time. A 100 hour programmable timer allows the interval between the time of reset of the clock and each shot window of optional 5 or 10 min duration, to be preselected. The PUSS is launched and recovered using a pull-up technique originally developed for current meters. The replay system is also described.In May 1976 sea trials of 5 PUSSes were conducted along a 200 km refraction line in the North Sea. The encouraging performance of the equipment resulted in the decision to build a further 10 units and to proceed with a 400 km refraction line planned for the summer of 1977.     

JONSWAP's parameters: Sorting out the inconsistencies

The original prognostic equations for the JONSWAP-spectrum contained inconsistencies. A subsequent paper (Hasselmann et al., 1976, J. phys. Oceanogr.6, 200–208) attempted to regularise the situation. This paper shows that there were still inconsistencies in the prognostic equations giving overestimations of the first moment of the spectrum and consequently the significant wave height. The prognostic equations are reworked systematically and results presented. It is shown that variable σ_a, σ_b and γ must be used to achieve consistent results     

A clay mineral investigation of six cores from the Gulf of Mexico

Samples were studied from each color change along six gravity cores from nearshore to deep-sea areas in the Gulf of Mexico. Analytical methods and techniques used to characterize the sediments were X-ray diffraction, differential thermal analysis, cation exchange capacity, particle size distribution and fractionation of the clay-size material with the supercentrifuge.