Instrument development to search for biomarkers on mars: Terrestrial acidophile, iron-powered chemolithoautotrophic communities as model systems

Recent findings by the MER rover opportunity confirming the presence of iron minerals that can only be formed in the presence of water emphasize the study of analogous environments to Mars on Earth. The study of chemolithoautotrophic communities living in acidic iron-rich habitats is highly relevant in order to identify Mars analog environment-specific biomarkers. Iron oxidizing bacteria like Leptospirillum ferrooxidans and Acidithiobacillus ferrooxidans have ways of life for which it is feasible to identify a past or present hypothetical niche on Mars. We have developed a strategy for biomarker identification based on: (i) search for biosignatures on acid and metal-rich environments; (ii) development of an immunosensor microarray; and (iii) integration into an instrument for autonomous and remote operation. The instrument that we have built, called Signs Of LIfe Detector (SOLID), is capable of processing a variety of samples for the detection of specific biomarkers. Antibodies against several bacterial strains have been developed and tested in a microarray biosensor on SOLID. Tests with field samples have been successfully performed, allowing the detection of L. ferrooxidans, A. ferrooxidans present in sediment samples.     

Modes to replace transitional asymptotic ray fields in a vertically inhomogeneous earth model

Summary. Asymptotic ray theory (ART) fails in transition regions near critically reflected, bottom glancing or caustic-forming rays in a vertically inhomogeneous layered earth. These deficiencies are repaired here by replacing the transitional ray fields with guided modes plus truncation remainders. Exact ray-mode equivalences and their high-frequency asymptotic approximations are formulated, and their validity and efficiency are verified by numerical comparisons for SH motion in a two-layer earth model comprised of an inhomogeneous sediment above an homogeneous semi-infinite bedrock.     

Three dimensional simulation of fluid flow in X‐ray CT images of porous media

A numerical scheme is developed in order to simulate fluid flow in three dimensional (3‐D) microstructures. The governing equations for steady incompressible flow are solved using the semi‐implicit method for pressure‐linked equations (SIMPLE) finite difference scheme within a non‐staggered grid system that represents the 3‐D microstructure. This system allows solving the governing equations using only one computational cell. The numerical scheme is verified through simulating fluid flow in idealized 3‐D microstructures with known closed form solutions for permeability. The numerical factors affecting the solution in terms of convergence and accuracy are also discussed. These factors include the resolution of the analysed microstructure and the truncation criterion. Fluid flow in 2‐D X‐ray computed tomography (CT) images of real porous media microstructure is also simulated using this numerical model. These real microstructures include field cores of asphalt mixes, laboratory linear kneading compactor (LKC) specimens, and laboratory Superpave gyratory compactor (SGC) specimens. The numerical results for the permeability of the real microstructures are compared with the results from closed form solutions. Copyright © 2004 John Wiley & Sons, Ltd.     

The dust coma of periodic comet Churyumov-Gerasimenko (1982 VIII)

The dust coma of Comet P/Churyumov-Gerasimenko was monitored in the infrared (1–20 μm) from September 1982 to March 1983. Maximum dust production rate of ～2 × 10⁵ g/sec occured in December, 1 month postperihelion. The ratio of dust/gas production was higher than that in other short-period comets. No silicate feature was visible in the 8- to 13-μm spectrum on 23 October. The mean geometric albedo of the grains was ～0.04 at 1.25 μm and ～0.05 at 2.2 μm.     

Merging of low-mass systems and the origin of the fundamental plane

We present the preliminary results of a study of how small stellar systems merge to form larger ones. As we display the families of galaxies in the μ_e - R_e plane (effective surface brightness versus effective radius) we realize that different morphological types occupy different loci, evidencing the different physical mechanisms operating in each family. As proposed by Capaccioli et al. (1992) this diagram is the logical equivalent of the HR diagram for stars. Here we take some initial steps in understanding of how we can establish the evolutionary tracks, solely due to dynamical processes, in the μ_e - R_e plane, ultimately making a dwarf elliptical to turn into a normal elliptical galaxy. This revised version was published online in August 2006 with corrections to the Cover Date.     

Numerical models of subduction and forearc deformation

Summary. Finite element models for shallow subduction produce realistic behaviour for a wide variety of mechanical strength and density distributions. Characteristic displacements are found to occur even without a discrete low-strength megathrust if there is a high-density subducted plate to localize lithospheric compression. A high-density plate is itself unnecessary in the presence of a low-strength megathrust and regional compression.
Successful finite element models produce an outer arc at the top of the trench slope, and forearc basin with geometry characteristic of natural analogues. These structural features occur by upward inelastic bending of the lithospheric wedge overlying the megathrust. This mechanically unstable behaviour may dissipate significant energy and cause the megathrust to migrate continuously by accretion, tectonic erosion, or abandonment and reinitiation farther offshore. Upward bending in the overriding plate is promoted by low megathrust dip, low megathrust shear strength, and high horizontal compression in the overriding plate.     

Multiple longshore sand bars in the upper Chesapeake Bay

In the upper Chesapeake Bay (Maryland, U.S.A.) field surveys were conducted at 18 multiple longshore sand bar sites. The multiple bar systems were found in water depths less than approximately 2 m (mean sea level), and exhibited mild bottom slopes of 0·0052 or less. The number of bars composing each system ranged from four to 17 and the spacing between the crests typically increased in the offshore direction, ranging from 12 to 70 m. Bar height also typically increased with distance offshore and ranged from 0·03 to 0·61 m. A grain size analysis of crest and trough sediment did not reveal any significant differences and the sediment was categorized as ‘fine sand’. A review of the literature data indicated that the Chesapeake Bay multiple bars possessed similar characteristics to those found in Gelding Bay (Baltic Sea); similarities in fetch, wave height and tidal range between the two bays may account for this finding. The surf-scaling parameter indicated that the multiple bar systems were extremely dissipative with regard to wave energy, and wave height appeared to be an important factor in controlling bar spacing and bar height. A multiple wave break point hypothesis was discussed as a possible mechanism for the formation of Chesapeake Bay multiple longshore bars, and limited observational evidence appeared to support such a mechanism.