LIDAR strip adjustment: Application to volcanic areas

DEMs derived from LIDAR data are nowadays largely used for quantitative analyses and modelling in geology and geomorphology. High-quality DEMs are required for the accurate morphometric and volumetric measurement of land features. We propose a rigorous automatic algorithm for correcting systematic errors in LIDAR data in order to assess sub-metric variations in surface morphology over wide areas, such as those associated with landslide, slump, and volcanic deposits. Our procedure does not require a priori knowledge of the surface, such as the presence of known ground control points. Systematic errors are detected on the basis of distortions in the areas of overlap among different strips. Discrepancies between overlapping strips are assessed at a number of chosen computational tie points. At each tie point a local surface is constructed for each strip containing the point. Displacements between different strips are then calculated at each tie point, and minimization of these discrepancies allows the identification of major systematic errors. These errors are identified as a function of the variables that describe the data acquisition system. Significant errors mainly caused by a non-constant misestimation of the roll angle are highlighted and corrected. Comparison of DEMs constructed using first uncorrected and then corrected LIDAR data from different Mt. Etna surveys shows a meaningful improvement in quality: most of the systematic errors are removed and the accuracy of morphometric and volumetric measurements of volcanic features increases. These corrections are particularly important for the following studies of Mt. Etna: calculation of lava flow volume; calculation of erosion and deposition volume of pyroclastic cones; mapping of areas newly covered by volcanic ash; and morphological evolution of a portion of an active lava field over a short time span.     

Antibiotic Resistance of Gram Negatives isolates from loggerhead sea turtles (Caretta caretta) in the central Mediterranean Sea

Previous studies on fish and marine mammals support the hypothesis that marine species harbor antibiotic resistance and therefore may serve as reservoirs for antibiotic-resistance genetic determinants. The aim of this study was to assess the resistance to antimicrobial agents of Gram negative strains isolated from loggerhead sea turtles (Caretta caretta). Oral and cloacal swabs from 19 live-stranded loggerhead sea turtles, with hooks fixed into the gut, were analyzed. The antimicrobial resistance of the isolates to 31 antibiotics was assessed using the disk-diffusion method. Conventional biochemical tests identified Citrobacter spp., Proteus spp., Enterobacter spp., Escherichia spp., Providencia spp., Morganella spp., Pantoea spp., Pseudomonas spp. and Shewanella spp. Highest prevalences of resistance was detected to carbenicillin (100%), cephalothin (92.6%), oxytetracycline (81.3%) and amoxicillin (77.8%). The isolates showing resistance to the widest range of antibiotics were identified as Citrobacter freundii, Proteus vulgaris, Providencia rettgeri and Pseudomonas aeruginosa. In this study, antibiotic resistant bacteria reflect marine contamination by polluted effluents and C. caretta is considered a bioindicator which can be used as a monitor for pollution.     

Sensitivity of runoff and soil erosion to climate change in two Mediterranean watersheds. Part II: assessing impacts from changes in storm rainfall,soil moisture and vegetation cover

The impacts of climate change on storm runoff and erosion in Mediterranean watersheds are difficult to assess due to the expected increase in storm frequency coupled with a decrease in total rainfall and soil moisture, added to positive or negative changes to different types of vegetation cover. This report, the second part of a two‐part article, addresses this issue by analysing the sensitivity of runoff and erosion to incremental degrees of change (from ? 20 to + 20%) to storm rainfall, pre‐storm soil moisture, and vegetation cover, in two Mediterranean watersheds, using the MEFIDIS model. The main results point to the high sensitivity of storm runoff and peak runoff rates to changes in storm rainfall (2·2% per 1% change) and, to a lesser degree, to soil water content (?1·2% per 1% change). Catchment sediment yield shows a greater sensitivity than within‐watershed erosion rates to both parameters: 7·8 versus 4·0% per 1% change for storm rainfall, and ? 4·9 versus ? 2·3% per 1% change for soil water content, indicating an increase in sensitivity with spatial scale due to changes to sediment connectivity within the catchment. Runoff and erosion showed a relatively low sensitivity to changes in vegetation cover. Finally, the shallow soils in one of the catchments led to a greater sensitivity to changes in storm rainfall and soil moisture. Overall, the results indicate that decreasing soil moisture levels caused by climate change could be sufficient to offset the impact of greater storm intensity in Mediterranean watersheds. Copyright © 2009 John Wiley & Sons, Ltd.     

The last 5000 years of activity at Sete Cidades volcano (São Miguel Island,Azores): Implications for hazard assessment

Sete Cidades is a central volcano with a summit caldera at the western end of São Miguel Island, Azores. Its stratigraphy comprises two main geological groups: the Inferior Group, the units of which date from more than 200 000 years ago through to 36 000 years before present, consisting of thick lava flows and subaerial volcaniclastic deposits that built the base of the central volcano; and the Superior Group which comprises all the activity from the last 36 000 years, including pumice and scoria fallout and PDC deposits with minor lava flows. The volcanostratigraphy is divided into six main formations — Risco, Ajuda, Bretanha, Lombas, Santa Bárbara and Lagoas, each defined by different activity phases in the volcano's evolution.     

The ground-based InSAR monitoring system at Stromboli volcano: linking changes in displacement rate and intensity of persistent volcanic activity

Stromboli volcano (Aeolian Archipelago, Southern Italy) experienced an increase in its volcanic activity from late December 2012 to March 2013, when it produced several lava overflows, major Strombolian explosions, crater-wall collapses pyroclastic density currents and intense spatter activity. An analysis of the displacement of the NE portion of the summit crater terrace and the unstable NW flank of the volcano (Sciara del Fuoco depression) has been performed with a ground-based interferometric synthetic aperture radar (GBInSAR) by dividing the monitored part of the volcano into five sectors, three in the summit vents region and two in the Sciara del Fuoco. Changes in the displacement rate were observed in sectors 2 and 3. Field and thermal surveys revealed the presence of an alignment of fumaroles confirming the existence of an area of structural discontinuity between sectors 2 and 3. High displacement rates in sector 2 are interpreted to indicate the increase in the magmastatic pressure within the shallow plumbing systems, related to the rise of the magma level within the conduits, while increased displacement rates in sector 3 are connected to the lateral expansion of the shallow plumbing system. The increases and decreases in the displacement rate registered by the GBInSAR system in the upper part of the volcano have been used as a proxy for changes in the pressure conditions in the shallow plumbing system of Stromboli volcano and hence to forecast the occurrence of phases of higher-intensity volcanic activity.     

Photosynthetic pigment changes and adaptations in biofilms in response to flow intermittency

Among the environmental factors affecting benthic algae and cyanobacteria in streams, the one often producing the largest effects is flow intermittency. This study aimed to characterize the responses of algal assemblages to flow intermittency in a Mediterranean intermittent stream during the drying, non-flow (112 days), and rewetting phases. Algae growing in the epilithic, epipsammic and hyporheic streambed compartments were analyzed for pigment composition, and for the existence of structural changes in cells. Chlorophyll-a concentrations decreased between 60 to 90 % during the non-flow phase, indicating low resistance of algal assemblages to desiccation. In contrast, fast recoveries of Chlorophyll-a when flow resumed indicated high resilience. Pigment composition revealed that the epilithic algal assemblage was considerably different than the epipsammic and hyporheic ones. These differences were mainly attributed to the physical conditions prevailing on each streambed compartment that allowed the growth of different algal assemblages. During the non-flow phase, the synthesis of protective carotenoids (i.e. echinenone and scytonemin) and the occurrence of cell resistance structures (i.e. enlarged membrane thickness and resistant spores) enhanced resistance of the epilithic biofilm. The resistance observed in the epilithic biofilm might also be related to the tightly adhered growth-form of algae on this substratum. Main results suggest that algal assemblages in the epilithic compartment, which were the most exposed to desiccation, were structurally and functionally better adapted to flow interruption than those colonizing other streambed compartments, and that this compartment plays a crucial role in maintaining ecosystem functions under varying flow periods.     

Can recreational echosounder-chartplotter systems be used to perform accurate nearshore bathymetric surveys?

This work intends to determine if low-cost surveying techniques based on recreational echosounders can be used to perform nearshore bathymetry for analysing evolution of coastal sectors. For that purpose, two hydrographic surveying techniques were compared, i.e. (1) a real-time kinematic differential global positioning system (RTK-DGPS) synchronised with a single beam echosounder with real-time tidal elevation correction and (2) a low-cost recreational echosounder-chartplotter system using Global Navigation Satellite Systems (GNSS) with real-time European Geostationary Navigation Overlay Service (EGNOS) augmentation services and depth values post-processed using measured sea level. Two bathymetric data sets were obtained, one by each method, for the same area and survey lines at an ebb tidal delta (Tavira Inlet, Ria Formosa Portugal). Vertical differences were determined assuming no morphological variations between surveys. Results showed that depth elevation differences between bathymetric surfaces were of 0.10?±?0.16 m, slightly higher but within the same order of the error attributable to the used interpolator (0.00?±?0.11 m, triangular surface fitting). The differences between surveys performed with two different equipment sets and using different methodologies for correcting water elevations are very small both quantitative and qualitatively. Those differences can be diminished by improving the tidal level correction and uncertainties associated to different tidal slopes throughout the survey area. Pitch/roll corrections performed with low-cost GPS receivers would be also a valuable addition to the accuracy and precision of the method. It is then concluded that navigation with EGNOS augmentation services and sounding devices ten times cheaper than combined RTK-DGPS with single beam echosounders allow to measure and monitor accurately the nearshore bathymetry.     

The state of water resources in major Mediterranean islands

This work analyses the state of water resources in six Mediterranean islands: Corsica, Crete, Cyprus, Mallorca, Malta and Sicily. The analysis is focused on the prevailing social, economic and hydroclimatological characteristics of these islands in order to identify the main common features affecting water availability, demand and use. A detailed analysis of the state of water resources in all the considered islands has been carried out. A background of current conditions relating to freshwater availability, quality and use has been established. Different strategies to face water scarcity and enhance water quality in theislands have been assessed in a context of climate change which is a common threat. The identification of similar problems for all the islands highlights the importance of strengthening inter-islands co-operation in the field of sustainable water resources management.