Influence of microbial photosynthesis on tufa stromatolite formation and ambient water chemistry, SW Japan

Photosynthetic influences on tufa stromatolite formation and ambient water chemistry were investigated at two well-studied streams depositing tufa in Southwestern Japan (Shirokawa and Shimokuraida). The tufa stromatolites in both streams are composed of fine-grained calcite crystals showing annual lamination, and colonized by a number of filamentous cyanobacteria as well as non-phototrophic bacteria. Microelectrode measurements of pH, O₂, and Ca²⁺ near the stromatolite surface (the diffusive boundary layer; DBL) revealed that the investigated tufa stromatolites are formed by photosynthesis-induced CaCO₃ precipitation (PCP): cyanobacterial photosynthesis induces calcite precipitation under light conditions, while respiration of cyanobacteria and non-phototrophic bacteria inhibits precipitation in the dark. The bulk water chemistry at the lower sites of the investigated streams showed the daytime decreases of Ca²⁺ concentration and alkalinity that was expected for significant influence of PCP, while the other expected change, increased pH, was not observed. In order to examine this discrepancy, a novel approach using semi-in situ microelectrode measurements was applied to perform precise quantitative calculations. The calculation results demonstrated that the observed Ca²⁺ concentration and alkalinity decreases were caused by PCP, and that the concomitant pH increase was expected to be under the detection level of a conventional pH meter. Although the amount of PCP is supposed to be significantly affected by light intensity, observations in Shimokuraida revealed that the amount of PCP on cloudy day nonetheless accounted for about 80% of that on sunny day. Despite the significant role of PCP for tufa stromatolite formation, PCP accounted for only about 10% of the precipitated calcite in the investigated streams, which indicates that tufa stromatolites, the characteristic deposits in the streams, are responsible for only a small portion of calcite precipitation, and the rest is considered to precipitate inorganically at biofilm-free substrates.     

The Hinode X-Ray Telescope (XRT): Camera Design, Performance and Operations

The X-ray Telescope (XRT) aboard the Hinode satellite is a grazing incidence X-ray imager equipped with a 2048×2048 CCD. The XRT has 1 arcsec pixels with a wide field of view of 34×34 arcmin. It is sensitive to plasmas with a wide temperature range from < 1 to 30 MK, allowing us to obtain TRACE-like low-temperature images as well as Yohkoh/SXT-like high-temperature images. The spacecraft Mission Data Processor (MDP) controls the XRT through sequence tables with versatile autonomous functions such as exposure control, region-of-interest tracking, flare detection, and flare location identification. Data are compressed either with DPCM or JPEG, depending on the purpose. This results in higher cadence and/or wider field of view for a given telemetry bandwidth. With a focus adjust mechanism, a higher resolution of Gaussian focus may be available on-axis. This paper follows the first instrument paper for the XRT (Golub et al., Solar Phys. 243, 63, 2007) and discusses the design and measured performance of the X-ray CCD camera for the XRT and its control system with the MDP.     

Accumulation of trace elements in harp seals (Phoca groenlandica) from Pangnirtung in the Baffin Island, Canada

Nineteen trace elements were determined in liver, muscle, kidney, gonads, and hair of 18 harp seals (Phoca groenlandica) from Pangnirtung in the Baffin Island, Canada. Concentrations of V, Mn, Fe, Cu, Mo, Ag, and Hg in the liver, Co, Cd, and Tl in the kidney, and Ba and Pb in the hair were significantly higher than those in other tissues. Significant positive correlations between Hg concentrations in the hair, and liver, kidney and testis imply usefulness of the hair sample for non-destructive monitoring of Hg in the harp seals. It is suggested that whereas Hg preferentially accumulates in the liver, the accumulation in other tissues is induced at higher hepatic Hg levels. In contrast, Se may not be accumulated in other tissues compared with the liver even at higher hepatic Hg levels because of the presence of excess Se for Hg detoxification in other tissues.     

Does freshening of surface water enhance heterotrophic prokaryote production in the western Arctic? Empirical evidence from the Canada Basin during September 2009

This study examined possible environmental factors that affect prokaryote variables in surface waters (upper 100 m of water column) in the Canada Basin, western Arctic Ocean. We collected data on prokaryote abundance and heterotrophic production ([³H]leucine incorporation) at eight stations deployed along a slope-to-offshore transect during September 2009. Prokaryote production and growth tended to increase with increasing chlorophyll a (Chl. a) and temperature and with decreasing salinity. The combination of Chl. a, temperature, and salinity accounted for a large fraction (74%) of the variability in prokaryote production, with the highest contribution made by Chl. a (r ² = 0.56), followed by salinity (r ² = 0.14) and temperature (r ² = 0.03). Similarly, the variability in prokaryote growth rate was largely accounted for by the combination of the three environmental variables (overall r ² of 0.64), with Chl. a making the largest contribution to variability (r ² = 0.33), followed by salinity (r ² = 0.27) and temperature (r ² = 0.05). These data are consistent with the notion that organic matter supply associated with freshwater inputs to surface layers can result in enhanced prokaryote production and growth in the Canada Basin. Our results provide insights into the regulation of the microbial loop in the Canada Basin where freshening has been proceeding rapidly due to increasing river discharge and sea-ice melting.     

Comparative analysis of measurements of stratospheric aerosol by lidar and aerosol sonde above Ny-Ålesund in the winter of 1995 [Comparative analysis of lidar and OPC observations]

Solid polar stratospheric cloud (PSC) layers observed by lidar and a balloon-borne optical particle counter (OPC) on 17 December 1995 are reexamined in a comparative analysis framework. The typical radius of solid particles in the observed PSC is determined through the comparative analysis to have been approximately 2.3 μm. A backward trajectory analysis for the air mass in which the solid particles were observed shows that the air mass had experienced temperatures 2–3 K below the frost point of nitric acid tri-hydrate (NAT) during the 4 days preceding the observations. The back-trajectory analysis traces the air mass back to northern Greenland and Ellesmere Island on 16 December, one day before the observations. A microphysical box model is used to investigate possible mechanisms of formation for the observed solid particles. The results of this model suggest that the solid particles formed under mesoscale temperature fluctuations associated with mountain lee wave activity induced by the relatively high terrestrial elevations of northern Greenland and Ellesmere Island.     

Coronal-Temperature-Diagnostic Capability of the Hinode/X-Ray Telescope Based on Self-consistent Calibration. II. Calibration with On-Orbit Data

The X-Ray Telescope (XRT) onboard the Hinode satellite is an X-ray imager that observes the solar corona with the capability of diagnosing coronal temperatures from less than 1 MK to more than 10 MK. To make full use of this capability, Narukage et al. (Solar Phys. 269, 169, 2011) determined the thickness of each of the X-ray focal-plane analysis filters based on calibration measurements from the ground-based end-to-end test. However, in their paper, the calibration of the thicker filters for observations of active regions and flares, namely the med-Be, med-Al, thick-Al and thick-Be filters, was insufficient due to the insufficient X-ray flux used in the measurements. In this work, we recalibrate those thicker filters using quiescent active region data taken with multiple filters of XRT. On the basis of our updated calibration results, we present the revised coronal-temperature-diagnostic capability of XRT.     

A New Aerodynamic Parametrization for Real Urban Surfaces

This study conducted large-eddy simulations (LES) of fully developed turbulent flow within and above explicitly resolved buildings in Tokyo and Nagoya, Japan. The more than 100 LES results, each covering a 1,000 $\times $ 1,000 m $^{2}$ area with 2-m resolution, provide a database of the horizontally-averaged turbulent statistics and surface drag corresponding to various urban morphologies. The vertical profiles of horizontally-averaged wind velocity mostly follow a logarithmic law even for districts with high-rise buildings, allowing estimates of aerodynamic parameters such as displacement height and roughness length using the von Karman constant $=$ 0.4. As an alternative derivation of the aerodynamic parameters, a regression of roughness length and variable Karman constant was also attempted, using a displacement height physically determined as the central height of drag action. Although both the regression methods worked, the former gives larger (smaller) values of displacement height (roughness length) by 20–25 % than the latter. The LES database clearly illustrates the essential difference in bulk flow properties between real urban surfaces and simplified arrays. The vertical profiles of horizontally-averaged momentum flux were influenced by the maximum building height and the standard deviation of building height, as well as conventional geometric parameters such as the average building height, frontal area index, and plane area index. On the basis of these investigations, a new aerodynamic parametrization of roughness length and displacement height in terms of the five geometric parameters described above was empirically proposed. The new parametrizations work well for both real urban morphologies and simplified model geometries.     

Heterogeneous condensation of presolar titanium carbide core‐graphite mantle spherules

Abstract— We investigate heterogeneous nucleation and growth of graphite on precondensed TiC grains in the gas outflows from carbon‐rich asymptotic giant branch (AGB) stars employing a newly‐derived heterogeneous nucleation rate taking into account of the chemical reactions at condensation. Competition between heterogeneous and homogeneous nucleations and growths of graphite is investigated to reveal the formation conditions of the TiC core‐graphite mantle spherules found in the Murchison meteorite. It is shown that no homogeneous graphite grain condenses whenever TiC condenses prior to graphite in the plausible ranges of the stellar parameters. Heterogeneous condensation of graphite occurs on the surfaces of growing TiC grains, and prevents the TiC cores from reaching the sizes realized if all available Ti atoms were incorporated into TiC grains. The physical conditions at the formation sites of the TiC core‐graphite mantle spherules observed in the Murchison meteorite are expressed by the relation 0.2 < n?_0.1 (M₅/ζ)^?1/2L₄^1/4 < 0.7, where v_0.1 is the gas outflow velocity at the formation site in units of 0.1 km s^?1, M₅ the mass loss rate in 10^?5 M⊙ year^?1, L₄ the stellar luminosity in 10⁴ L⊙, and M/ζ is the effective mass loss rate taking account of non‐spherical symmetry of the gas outflows. The total gas pressures P_c at the formation sites for the effective mass loss rates M/ζ = 10^?5‐10^?3 M⊙ year^?1 correspond to 0.01 < P_c < 0.9 dyn cm^?2, implying that the observed TiC core‐graphite mantle spherules are formed not only at the superwind stage but also at the earlier stage of low mass loss rates. The constraint on the C/O abundance ratio, 1 < ? ? 1.03, is imposed to reproduce the observed sizes of the TiC cores. The derived upper limit of the C/O ratio is lower than the values estimated from the calculations without taking into account of heterogeneous condensation of graphite, and is close to the lower end of the C/O ratios inferred from the astronomical observations of carbon‐rich AGB stars. Brief discussion is given on other types of graphite spherules.     

The role of Fischer-Tropsch catalysis in the origin of methane-rich Titan

Fischer-Tropsch catalysis, which converts CO and H₂ into CH₄ on the surface of iron catalyst, has been proposed to produce the CH₄ on Titan during its formation process in a circum-planetary subnebula. However, Fischer-Tropsch reaction rate under the conditions of subnebula have not been measured quantitatively yet. In this study, we conduct laboratory experiments to determine CH₄ formation rate and also conduct theoretical calculation of clathrate formation to clarify the significance of Fischer-Tropsch catalysis in a subnebula. Our experimental result indicates that the range of conditions where Fischer-Tropsch catalysis proceeds efficiently is narrow (T∼500-600 K) in a subnebula because the catalysts are poisoned at temperatures above 600 K under the condition of subnebula (i.e., H₂/CO = 1000). This suggests that an entire subnebula may not become rich in CH₄ but rather that only limited region of a subnebula may enriched in CH₄ (i.e., CH₄-rich band formation). Our experimental result also suggests that both CO and CO₂ are converted into CH₄ within time significantly shorter than the lifetime of the solar nebula at the optimal temperatures around 550 K. The calculation result of clathration shows that CO₂-rich satellitesimals are formed in the catalytically inactive outer region of subnebula. In the catalytically active inner region, CH₄-rich satellitesimals are formed. The resulting CH₄-rich satellitesimals formed in this region play an important role in the origin of CH₄ on Titan. When our experimental data are applied to a high-pressure model for subnebula evolution, it would predict that there should be CO₂ underneath the Iapetus subsurface and no thick CO₂ ice layer on Titan's icy crust. Such surface and subsurface composition, which may be observed by Cassini-Huygens mission, would provide crucial information on the origin of icy satellites.