Importance of intracellular Fe pools on growth of marine diatoms by using unialgal cultures and on the Oyashio region phytoplankton community during spring

We report on the ability for luxury Fe uptake and the potential for growth utilizing intracellular Fe pools for 4 coastal centric diatom isolates and in situ phytoplankton assemblages, mainly composed of diatoms. Iron uptake of the diatom isolates and natural phytoplankton assemblages in the Oyashio region during spring blooms were prevented by adding hydroxamate siderophore desferrioxamine B (DFB). After the addition of DFB, intracellular Fe in the diatom isolates supported 2.4–4.2 cell divisions with 1.2–2.6 Chl a doublings. The intracellular Fe was primarily used for cell generation rather than Chl a production, leading to a reduction in the Chl a cell quota in the Fe-starved cells with time. The metabolic properties of the Fe-starved cells with their cell morphologies were different among species or genera. An on-deck incubation experiment also exhibited 1.9 cell divisions and 0.81 Chl a doublings of phytoplankton after the addition of DFB, also indicating the preference of cell generation over Chl a production. A decrease in the level of cellular Chl a, a main light-harvesting pigment in Fe-starved diatoms, may become a superior survival strategy to protect the cells from high irradiance that can cause photo-oxidative damages through photosynthesis. Such relatively low-Fe with high-light conditions could often occur in surface waters of the Oyashio region from spring to summer.     

InSAR detection of residual settlement of an ocean reclamation engineering project: a case study of Hong Kong International Airport

Man-made land or islands that are reclaimed from the sea are suitable for building airports, harbors, and industry parks for material transportation because of their broad air and land spaces. However, the reclaimed foundation settlement process is of public concern, including the continuous impact of ocean processes on its stability. The majority of the buildings and facilities of Hong Kong International Airport (HKIA) are built on a reclaimed foundation. The reclaimed foundation has been in residual settlement since completion of the filling project in 1994. In this study, we use persistent scatterer interferometry (PSI) and ENVISAT (European Satellite) advanced synthetic aperture radar (ASAR) data to detect the residual settlement rates from 19 April 2006 to 9 January 2008. We use ground truth data to develop empirical correction models for correcting systematic biases in the ASAR PSI-detected settlement rates. The corrected data follow the Lorentz distribution well, implying that the residual settlement process is dominated by two modes or categories of settlement rates. The first category represents a relatively stable state and the second category represents a continuous settlement state. A ground settlement rate map of HKIA shows that an area of the Passenger Terminal Building and an area of the Southern Runway are two relatively stable areas. There are two major continuous settlement areas. One covers the airport Midfield. Another is along the coastline, implying that attention should be paid to impacts of ocean processes on the stability of airport foundations.     

<Emphasis Type="Italic">Cochlodinium polykrikoides</Emphasis> red tide detection in the South Sea of Korea using spectral classification of MODIS data

To distinguish true red tide water (particularly Cochlodinium polykrikoides blooms) from non-red tide water (false satellite high chlorophyll water) in the South Sea of Korea, we developed a systematic classification method using spectral information from MODIS level products and applied it to five different harmful algal bloom events. Red tide and nonred tide waters were classified based on four different criteria. The first step revealed that the radiance peaks of potential red tide water occurred at 555 and 678 nm. The second step separated optically different waters that were influenced by relatively low and high contributions of colored dissolved organic matter (CDOM) (including detritus) to chlorophyll. The third and fourth steps discriminated red tide water from non-red tide water based on the blue-to-green ratio in areas with lower and higher contributions of CDOM to chlorophyll, respectively. After applying the red tide classification (using the four criteria), the spectral response of the red tide water, which is influenced by pigment concentration, showed different slopes for the blue and green bands (lower slope at blue bands and higher slope at green bands). The opposite result was found for non-red tide water, due to decreasing phytoplankton absorption and increasing detritus/CDOM absorption at blue bands. The results were well matched with the discoloration of water (blue to dark red/brown) and delineated the areal coverage of C. polykrikoides blooms, revealing the nature of spatial and temporal variations in red tides. This simple spectral classification method led to increase user accuracy for C. polykrikoides and non-red tide blooms (>46% and >97%) and provided a more reliable and robust identification of red tides over a wide range of oceanic environments than was possible using chlorophyll a concentration, chlorophyll anomaly, fluorescence analysis, or proposed red tide detection algorithms.     

Molecular expression of opsin gene in growing juvenile mackerel (<Emphasis Type="Italic">Scomber japonicus</Emphasis> Houttuyn)

Fish have developed color vision that is closely adapted to their photic environments, where both spectral sensitivity and the number of visual opsins are influenced. The mackerel used in this study is one of the most important fishery stocks in Korea. The opsin gene of the mackerel juveniles after 20 days in hatching was isolated and characterized based on the molecular study of visual photoreceptor. The full-length mackerel opsin gene was obtained by PCR amplification of genomic DNA, as well as cDNA synthesis. Sequence analysis of the opsin gene showed that it contained a 1,080 bp open reading frame encoding 360 amino acids. Based on Schiff’s base formation (S114, K119), glycosylation (E3, F37) and palmitoylation (S281, 282), the deduced amino acid sequence had a typical rod opsin. The mackerel and Gempylus serpens showed 73.7% DNA homology on opsin gene, which was higher than any other of investigated species. In the analysis of phylogenetic relationship, the genetic placement of the mackerel is closer to that of Scombroidei than Labroidei, with supporting somewhat strong bootstrap value. In the analysis of Northern and RT-PCR, the probed products were observed only in rapidly growing juveniles. These findings indicate that in mackerel opsin mRNA expression can be detected in day-20 hatching larvae. It may play an important role in stimulating growth hormone.     

Variations in turbulent energy dissipation and water column stratification at the entrance of a tidally energetic strait

We observed tidal currents, turbulent energy dissipation and water column stratification at the entrance of a narrow strait (Neko Seto) in the Seto Inland Sea, Japan, using a free-falling turbulent microstructure profiler (TurboMAP) and acoustic Doppler current profiler (ADCP). The variation in turbulent energy dissipation at the entrance of the strait was not at quarter-diurnal frequency but at semi-diurnal frequency; turbulent energy dissipation was enhanced during the ebb tide, although it was moderate during the flood tide. This result is consistent with the results of Takasugi (1993), which showed the asymmetry of tidal energy loss during a semidiurnal tidal cycle using control volume analysis. It is suggested that significant turbulent energy dissipation is generated in the strait, which influences the properties of water outside the strait when tidal currents flow out from the strait.     

Vertical double silicate maxima in the sea-ice reduction region of the western Arctic Ocean: Implications for an enhanced biological pump due to sea-ice reduction

The R/V Mirai conducted hydrographic surveys in the western Arctic Ocean during summer 2004 (Mirai04) over wide east-west ranges from Alaska to eastern Siberia, where sea-ice cover has been greatly reduced in recent summers. The obtained data reveal differences in silicate profiles between shelf slope areas east and west of the Chukchi Plateau, the ridge that divides the Canada Basin into the Alaskan and east Siberian sides. East of the plateau, a single silicate maximum was found in a layer of Pacific-origin winter water, as examined in many previous studies. In contrast, west of the plateau, we found vertical double silicate maxima, which are reported for the first time in this study. The shallower silicate maximum corresponded to an N** minimum, signaling denitrification at the shelf bottom. This suggests that the shallower silicate maximum was caused by the spreading of shelf water. In contrast, the deeper silicate maximum corresponded to an oxygen minimum and a maximum silicate/phosphate ratio (Si/P), suggesting that this deeper maximum resulted from the decomposition of opal-shelled organisms. We also compared a silicate profile from Mirai04 to aprofile from the Arctic Ocean Section 94 (AOS94) expedition of 1994, a heavy ice year. The results suggest that sea-ice loss has enhanced biological activities, likely resulting in the appearance of the deeper silicate maximum.     

Influence of Environmental Factors on Spawning of the American Horseshoe Crab (<Emphasis Type="Italic">Limulus polyphemus</Emphasis>) in the Great Bay Estuary,New Hampshire,USA

The Great Bay Estuary, New Hampshire, USA is near the northern distribution limit of the American horseshoe crab (Limulus polyphemus). This estuary has few ideal beaches for spawning, yet it supports a modest population of horseshoe crabs. There is no organized monitoring program in the Great Bay Estuary, so it is unclear when and where spawning occurs. In this 2-year study (May through June, 2012 and 2013), >5,000 adult horseshoe crabs were counted at four sites in the estuary. The greatest densities of horseshoe crabs were observed at Great Bay sites in the upper, warmer reaches of the estuary. Peaks of spawning activity were not strongly correlated with the times of the new or full moons, and similar numbers of horseshoe crabs were observed mating during daytime and nighttime high tides. While many environmental factors are likely to influence the temporal and spatial patterns of spawning in this estuary, temperature appears to have the most profound impact.     

Extended Finite Element Method for the Analysis of Discontinuities in Rock Masses

The strength and deformability of rock mass primarily depend on the condition of joints and their spacing and partially on the engineering properties of rock matrix. Till today, numerical analysis of discontinuities e.g. joint, fault, shear plane and others is conducted placing an interface element in between two adjacent rock matrix elements. However, the applicability of interface elements is limited in rock mechanics problems having multiple discontinuities due to its inherent numerical difficulties often leading to non-convergent solution. Recent developments in extended finite element method (XFEM) having strong discontinuity imbedded within a regular element provide an opportunity to analyze discrete discontinuities in rock masses without any numerical difficulties. This concept is based on partition of unity principle and can be used for cohesive rock joints. This paper summarizes the mathematical frameworks for the implementation of strong discontinuities in 3 and 6 nodded triangular elements and also provides numerical examples of the application of XFEM in one and two dimensional problems with single and multiple discontinuities.     

Structural changes in macrozoobenthic communities due to summer hypoxia in Gamak Bay,Korea

The purpose of this study was to examine the structural changes that macrozoobenthic communities underwent as a result of the annual summer hypoxia at the northern part of Gamak Bay, Korea. During this study period, summer hypoxia occurred at the northern part of Gamak Bay in July. Under hypoxic conditions, both the number of species and population density decreased rapidly. Species diversity also manifested lower values during this hypoxic period. Faunal composition changed seasonally with Capitella capitata dominant at the hypoxic sites in spring but disappearing in summer. The health condition of the benthic faunal community assessed by the composition of functional groups within community also changed due to the summer hypoxia from a slightly polluted condition to a highly polluted condition. From these results it has been shown that the recent macrozoobenthic community structure in Gamak Bay has returned to a state similar to what it was before dredging works commenced.