Seasonal and interannual variability of oceanic carbon cycling in the western and central tropical-subtropical pacific: A physical-biogeochemical modeling study

The oceanic carbon cycle in the tropical-subtropical Pacific is strongly affected by various physical processes with different temporal and spatial scales, yet the mechanisms that regulate air-sea CO₂ flux are not fully understood due to the paucity of both measurement and modeling. Using a 3-D physical-biogeochemical model, we simulate the partial pressure of CO₂ in surface water (pCO_2sea) and air-sea CO₂ flux in the tropical and subtropical regions from 1990 to 2004. The model reproduces well the observed spatial differences in physical and biogeochemical processes, such as: (1) relatively higher sea surface temperature (SST), and lower dissolved inorganic carbon (DIC) and pCO_2sea in the western than in the central tropical-subtropical Pacific, and (2) predominantly seasonal and interannual variations in the subtropical and tropical Pacific, respectively. Our model results suggest a non-negligible contribution of the wind variability to that of the air-sea CO₂ flux in the central tropical Pacific, but the modeled contribution of 7% is much less than that from a previous modeling study (30%; McKinley et al., 2004). While DIC increases in the entire region SST increases in the subtropical and western tropical Pacific but decreases in the central tropical Pacific from 1990 to 2004. As a result, the interannual pCO_2sea variability is different in different regions. The pCO_2sea temporal variation is found to be primarily controlled by SST and DIC, although the role of salinity and total alkalinity, both of which also control pCO_2sea, need to be elucidated by long-term observations and eddy-permitting models for better estimation of the interannual variability of air-sea CO₂ flux.     

Observation of the bottom boundary layer off the Soya Warm Current

A mooring observation of current velocity, temperature and bottom pressure was carried out approximately 30 km off the coast of Monbetsu, between August 7 and September 2, 2005, to investigate the characteristics of bottom boundary layer (BBL) off the Soya Warm Current (SWC). We succeeded in measuring the Ekman veering and bottom Ekman transport in the BBL. On comparing the observed current velocity with that represented by the classical theoretical equation, the observed alongshore current velocity in BBL disagreed with that represented by the classical theoretical equation, but the cross-shore one agreed well. However after applying a linear extrapolation for the alongshore current velocity to estimate the alongshore geostrophic current velocity above the bottom, we could explain the alongshore current velocity by that represented in the classical theoretical equation. Consequently, our observations strongly support one of the proposed formation mechanisms of the cold-water belt observed off the SWC, that is, the convergence of bottom Ekman transport. The volume transport of vertical pumping velocity was estimated to be (0.12–0.25) Sv. In addition, the vertical profile of average temperature in all observation periods shows that slightly warmer water lies beneath the homogenous temperature layer, in the BBL. The result is considered to imply that the down-slope advection due to bottom Ekman transport supplies the SWC water in BBL and the eddy diffusivity of order of 10⁻³ m²s⁻¹ maintains the oceanic structure in the bottom mixed layer.     

Diatoms grow faster using ammonium in rapidly flushed eutrophic Dokai Bay,Japan

The importance of the nitrogen source for phytoplankton growth in a highly eutrophic embayment, Dokai Bay, was investigated. The DIN concentration often exceeded 100 μM of which 40–70% was NH₄ ⁺. During two incubation experiments, the natural assemblage of mainly diatoms took up NH₄ ⁺ instead of NO₃ ⁻. The growth of two Skeletonema species isolated in Dokai Bay were significantly faster on NH₄ ⁺ (1.86 and 1.27 div. d⁻¹ respectively) than on NO₃ ⁻ (1.55 and 1.04 div. d⁻¹ respectively). Our results indicated that these diatoms could grow faster by using NH₄ ⁺ compared to NO₃ ⁻ in this eutrophic bay.     

Stochastic evaluation of fluvial to marginal marine sealing facies

Hydrocarbon top seal analyses are particularly difficult in fluvial and marginal marine settings. Although these settings often contain beds comprised of a low-permeability, clay-rich lithology associated with high quality seals, their presence does not guarantee an effective seal because individual beds within the stratal unit may be laterally discontinuous. Lateral facies changes, truncation of fine-grained beds, or the presence of crevasse splays may provide cross-stratal migration pathways, reducing the effective sealing capacity to a magnitude less than the closure height.     

A control-volume finite-element method for three-dimensional multiphase basin modeling

In this paper we describe a 3D control-volume finite-element method to solve numerically the coupled partial differential equations (PDEs) governing geological processes involved in the evolution of sedimentary basins. These processes include sediment deposition and deformation, hydrocarbon generation, multiphase fluid flow, and heat transfer in deforming porous media.     

The thermal structure of the Dvurechenskii mud volcano and its implications for gas hydrate stability and eruption dynamics

The sediment temperature distribution at mud volcanoes provides insights into their activity and into the occurrence of gas hydrates. If ambient pressure and temperature conditions are close to the limits of the gas hydrate stability field, the sediment temperature distribution not only limits the occurrence of gas hydrates, but is itself influenced by heat production and consumption related to the formation and dissociation of gas hydrates. Located in the Sorokin Trough in the northern Black Sea, the Dvurechenskii mud volcano (DMV) was in the focus of detailed investigations during the M72/2 and M73/3a cruises of the German R/V Meteor and the ROV Quest 4000 m in February and March 2007. A large number of in-situ sediment temperature measurements were conducted from the ROV and with a sensor-equipped gravity corer. Gas hydrates were sampled in pressurized cores using a dynamic autoclave piston corer (DAPC). The thermal structure of the DMV suggests a regime of fluid flow at rates decreasing from the summit towards the edges of the mud volcano, accompanied by intermittent mud expulsion at the summit. Modeled gas hydrate dissociation temperatures reveal that the gas hydrates at the DMV are very close to the stability limits. Changes in heat flow due to variable seepage rates probably do not result in changes in sediment temperature but are compensated by gas hydrate dissociation and formation.     

Impact of dynamic feedbacks between sedimentation,sea-level rise,and biomass production on near-surface marsh stratigraphy and carbon accumulation

Salt marshes accrete both organic and inorganic sediments. Here we present analytical and numerical models of salt marsh sedimentation that, in addition to capturing inorganic processes, explicitly account for above- and belowground organic processes including root growth and decay of organic carbon. The analytical model is used to examine the bias introduced by organic processes into proxy records of sedimentation, namely ¹³⁷Cs and ²¹⁰Pb. We find that accretion rates estimated using ²¹⁰Pb will be less than accretion rates estimated using the ¹³⁷Cs peak in steadily accreting marshes if (1) carbon decay is significant and (2) data for ²¹⁰Pb extend below the ¹³⁷Cs peak. The numerical model expands upon the analytical model by including belowground processes such as compaction and root growth, and by explicitly tracking the evolution of aboveground biomass and its effect on sedimentation rates. Using the numerical model we explore how marsh stratigraphy responds to sediment supply and the rate of sea-level rise. It is calibrated and tested using an extensive data set of both marsh stratigraphy and measurements of vegetation dynamics in a Spartina alterniflora marsh in South Carolina, USA. We find that carbon accumulation in marshes is nonlinearly related to both the supply of inorganic sediment and the rate of sea-level rise; carbon accumulation increases with sea-level rise until sea-level rise reaches a critical rate that drowns the marsh vegetation and halts carbon accumulation. The model predicts that changes in carbon storage resulting from changing sediment supply or sea-level rise are strongly dependent on the background sediment supply: if inorganic sediment supply is reduced in an already sediment poor marsh the storage of organic carbon will increase to a far greater extent than in a sediment-rich marsh, provided that the rate of sea-level rise does not exceed a threshold. These results imply that altering sediment supply to estuaries (e.g., by damming upstream rivers or altering littoral sediment transport) could lead to significant changes in the carbon budgets of coastal salt marshes.     

Estimation of the <Emphasis Type="Italic">in situ</Emphasis> Ultraviolet-A absorption of seawater by a simple irradiance inversion model

An irradiance inversion model to estimate the in situ absorption coefficient of seawater has been developed for the Ultraviolet-A (UVA) wavelength domain. Input parameters are sun angle and the up-and downward planar irradiances measured for at least two depths. The present method does not require seawater to be sampled, and is a discrete wavelength method which returns the absorption coefficient at a given wavelength from the irradiances measured at that wavelength without assuming a spectral shape of any optical properties a priori. Comparison between the model results and spectrophotometric measurements shows that the model is practically useful when cloud cover in the atmosphere is ≤ 50%. According to the present method, measurements of the irradiances enable simultaneous observation of the in situ underwater UVA radiation level and the absorption capacity of bulk seawater using a radiometer.     

Numerical study of baroclinic tides in Luzon Strait

The spatial and temporal variations of baroclinic tides in the Luzon Strait (LS) are investigated using a three-dimensional tide model driven by four principal constituents, O₁, K₁, M₂ and S₂, individually or together with seasonal mean summer or winter stratifications as the initial field. Barotropic tides propagate predominantly westward from the Pacific Ocean, impinge on two prominent north-south running submarine ridges in LS, and generate strong baroclinic tides propagating into both the South China Sea (SCS) and the Pacific Ocean. Strong baroclinic tides, ∼19 GW for diurnal tides and ∼11 GW for semidiurnal tides, are excited on both the east ridge (70%) and the west ridge (30%). The barotropic to baroclinic energy conversion rate reaches 30% for diurnal tides and ∼20% for semidiurnal tides. Diurnal (O₁ and K₁) and semidiurnal (M₂) baroclinic tides have a comparable depth-integrated energy flux 10–20 kW m⁻¹ emanating from the LS into the SCS and the Pacific basin. The spring-neap averaged, meridionally integrated baroclinic tidal energy flux is ∼7 GW into the SCS and ∼6 GW into the Pacific Ocean, representing one of the strongest baroclinic tidal energy flux regimes in the World Ocean. About 18 GW of baroclinic tidal energy, ∼50% of that generated in the LS, is lost locally, which is more than five times that estimated in the vicinity of the Hawaiian ridge. The strong westward-propagating semidiurnal baroclinic tidal energy flux is likely the energy source for the large-amplitude nonlinear internal waves found in the SCS. The baroclinic tidal energy generation, energy fluxes, and energy dissipation rates in the spring tide are about five times those in the neap tide; while there is no significant seasonal variation of energetics, but the propagation speed of baroclinic tide is about 10% faster in summer than in winter. Within the LS, the average turbulence kinetic energy dissipation rate is O(10⁻⁷) W kg^{− 1} and the turbulence diffusivity is O(10⁻³) m²s⁻¹, a factor of 100 greater than those in the typical open ocean. This strong turbulence mixing induced by the baroclinic tidal energy dissipation exists in the main path of the Kuroshio and is important in mixing the Pacific Ocean, Kuroshio, and the SCS waters.     

Review of recent findings on the water masses and circulation in the East Sea (Sea of Japan)

Recent findings on water masses, biogeochemical tracers, deep currents and basin-scale circulation in the East/Japan Sea, and numerical modeling of its circulation are reviewed. Warming continues up to 2007 despite an episode of bottom water formation in the winter of 2000–2001. Water masses have definitely changed since the 1970s and further changes are expected due to the continuation of warming. Accumulation of current data in deep waters of the East/Japan Sea reveals that the circulation in the East/Japan Sea is primarily cyclonic with sub-basin scale cyclonic and anticyclonic cells in the Ulleung Basin (Tsushima Basin). Our understanding of the circulation of intermediate water masses has been deepened through high-resolution numerical studies, and the implementation of data assimilation has had initial success. However, the East/Japan Sea is unique in terms of the fine vertical structures of physical and biogeochemical properties of cold water mass measured at the highest precision and their rapid change with the global warming, so that full understanding of the structures and their change requires in-depth process studies with continuous monitoring programs.