Microstructure observations in the upper layer of the South China Sea

A general pattern for turbulent mixing in the upper layer of the South China Sea (SCS) is presented based on TurboMAP measurements in April and May 2010. The turbulence level decreased significantly overall from north to south, and weakened from east to west in the northern SCS. The average dissipation rate north of 18°N reaches 1.69 × 10^?8 W/kg, approximately six times larger than that south of 18°N. The mean mixing efficiency in the SCS is 0.2, with a maximum of 0.31 near the Luzon Strait. At one repeatedly occupied station located in the central deep basin, the dissipation rate varies diurnally in the mixed layer and pycnocline due to diurnal heating and cooling by solar radiation and local barotropic tide, respectively.     

AMSR-E sea surface temperature (SST) charts enhancement

Microwave satellite images used for retrieving sea surface temperatures often have such distortions as noise and blurring of the thermal fronts. An image processing approach based on the Mumford-Shah model of optimal image approximation is considered for the solution to this problem. We divide images into flat areas and frontal zones, and then process these areas separately. Image fragmentation is based on automatic detection of the thermal front lines. SST enhancement in frontal zones is achieved by using image deconvolution methods. It has been shown that SST errors in high gradient areas reach 1–3 °C. The proposed approach can decrease this discrepancy.     

Seasonal variations in the nitrogen isotopic composition of settling particles at station K2 in the western subarctic North Pacific

Intensive observations using hydrographical cruises and moored sediment trap deployments during 2010 and 2012 at station K2 in the North Pacific Western Subarctic Gyre (WSG) revealed seasonal changes in δ ¹⁵N of both suspended and settling particles. Suspended particles (SUS) were collected from depths between the surface and 200 m; settling particles by drifting sediment traps (DST; 100–200 m) and moored sediment traps (MST; 200 and 500 m). All particles showed higher δ ¹⁵N values in winter and lower in summer, contrary to the expected by isotopic fractionation during phytoplankton nitrate consumption. We suggest that these observed isotopic patterns are due to ammonium consumption via light-controlled nitrification, which could induce variations in δ ¹⁵N(SUS) of 0.4–3.1 ‰ in the euphotic zone (EZ). The δ ¹⁵N(SUS) signature was reflected by δ ¹⁵N(DST) despite modifications during biogenic transformation from suspended particles in the EZ. δ ¹⁵N enrichment (average: 3.6 ‰) and the increase in C:N ratio (by 1.6) in settling particles suggests year-round contributions of metabolites from herbivorous zooplankton as well as TEPs produced by diatoms. Accordingly, seasonal δ ¹⁵N(DST) variations of 2.4–7.0 ‰ showed a significant correlation with primary productivity (PP) at K2. By applying the observed δ ¹⁵N(DST) vs. PP regression to δ ¹⁵N(MST) of 1.9–8.0 ‰, we constructed the first annual time-series of PP changes in the WSG. This new approach to estimate productivity can be a powerful tool for further understanding of the biological pump in the WSG, even though its validity needs to be examined carefully.     

Dynamical downscaling of future sea level change in the western North Pacific using ROMS

The future regional sea level (RSL) rise in the western North Pacific is investigated by dynamical downscaling with the Regional Ocean Modeling System (ROMS) with an eddy-permitting resolution based on three global climate models—MIROC-ESM, CSIRO-Mk3.6.0, and GFDL-CM3—under the highest greenhouse-gas emission scenario. The historical run is forced by the air-sea fluxes calculated from Coordinated Ocean Reference Experiment version 2 (COREv2) data. Three future runs—ROMS-MIROC, ROMS-CSIRO, and ROMS-GFDL—are forced with an atmospheric field constructed by adding the difference between the climate model parameters for the twenty-first and twentieth century to fields in the historical run. In all downscaling, the RSL rise along the eastern coast of Japan is generally half or less of the RSL rise maxima off the eastern coast. The projected regional (total) sea level rises along the Honshu coast during 2081–2100 relative to 1981–2000 are 19–25 (98–104), 6–15 (71–80), and 8–14 (80–86) cm in ROMS-MIROC, ROMS-CSIRO, and ROMS-GFDL, respectively. The discrepancies of the RSL rise along the Honshu coast between the climate models and downscaling are less than 10 cm. The RSL changes in the Kuroshio Extension (KE) region in all downscaling simulations are related to the changes of KE (northward shift or intensification) with climate change.     

A multi-tracer approach to delineate groundwater dynamics in the Rio Actopan Basin,Veracruz State,Mexico

Geochemistry and environmental tracers were used to understand groundwater resources, recharge processes, and potential sources of contamination in the Rio Actopan Basin, Veracruz State, Mexico. Total dissolved solids are lower in wells and springs located in the basin uplands compared with those closer to the coast, likely associated with rock/water interaction. Geochemical results also indicate some saltwater intrusion near the coast and increased nitrate near urban centers. Stable isotopes show that precipitation is the source of recharge to the groundwater system. Interestingly, some high-elevation springs are more isotopically enriched than average annual precipitation at higher elevations, indicating preferential recharge during the drier but cooler winter months when evapotranspiration is reduced. In contrast, groundwater below 1,200 m elevation is more isotopically depleted than average precipitation, indicating recharge occurring at much higher elevation than the sampling site. Relatively cool recharge temperatures, derived from noble gas measurements at four sites (11–20 °C), also suggest higher elevation recharge. Environmental tracers indicate that groundwater residence time in the basin ranges from 12,000 years to modern. While this large range shows varying groundwater flowpaths and travel times, ages using different tracer methods (¹⁴C, ³H/³He, CFCs) were generally consistent. Comparing multiple tracers such as CFC-12 with CFC-113 indicates piston-flow to some discharge points, yet binary mixing of young and older groundwater at other points. In summary, groundwater within the Rio Actopan Basin watershed is relatively young (Holocene) and the majority of recharge occurs in the basin uplands and moves towards the coast.     

Soil-water dynamics and tree water uptake in the Sacramento Mountains of New Mexico (USA): a stable isotope study

In the southwestern United States, precipitation in the high mountains is a primary source of groundwater recharge. Precipitation patterns, soil properties and vegetation largely control the rate and timing of groundwater recharge. The interactions between climate, soil and mountain vegetation thus have important implications for the groundwater supply. This study took place in the Sacramento Mountains, which is the recharge area for multiple regional aquifers in southern New Mexico. The stable isotopes of oxygen and hydrogen were used to determine whether infiltration of precipitation is homogeneously distributed in the soil or whether it is partitioned among soil-water ‘compartments’, from which trees extract water for transpiration as a function of the season. The results indicate that “immobile” or “slow” soil water, which is derived primarily from snowmelt, infiltrates soils in a relatively uniform fashion, filling small pores in the shallow soils. “Mobile” or “fast” soil water, which is mostly associated with summer thunderstorms, infiltrates very quickly through macropores and along preferential flow paths, evading evaporative loss. It was found that throughout the entire year, trees principally use immobile water derived from snowmelt mixed to differing degrees with seasonally available mobile-water sources. The replenishment of these different water pools in soils appears to depend on initial soil-water content, the manner in which the water was introduced to the soil (snowmelt versus intense thunderstorms), and the seasonal variability of the precipitation and evapotranspiration. These results have important implications for the effect of climate change on recharge mechanisms in the Sacramento Mountains.     

Estuarine Habitat and Demographic Factors Affect Juvenile Chinook (<Emphasis Type="Italic">Oncorhynchus tshawytscha</Emphasis>) Growth Variability in a Large Freshwater Tidal Estuary

Estuarine rearing has been shown to enhance within watershed biocomplexity and support growth and survival for juvenile salmon (Oncorhynchus sp.). However, less is known about how growth varies across different types of wetland habitats and what explains this variability in growth. We focused on the estuarine habitat use of Columbia River Chinook salmon (Oncorhynchus tshawytscha), which are listed under the Endangered Species Act. We employed a generalized linear model (GLM) to test three hypotheses: (1) juvenile Chinook growth was best explained by temporal factors, (2) habitat, or (3) demographic characteristics, such as stock of origin. This study examined estuarine growth rate, incorporating otolith microstructure, individual assignment to stock of origin, GIS habitat mapping, and diet composition along ~130 km of the upper Columbia River estuary. Juvenile Chinook grew on average 0.23 mm/day in the freshwater tidal estuary. When compared to other studies in the basin our growth estimates from the freshwater tidal estuary were similar to estimates in the brackish estuary, but ~4 times slower than those in the plume and upstream reservoirs. However, previous survival studies elucidated a possible tradeoff between growth and survival in the Columbia River basin. Our GLM analysis found that variation in growth was best explained by habitat and an interaction between fork length and month of capture. Juvenile Chinook salmon captured in backwater channel habitats and later in the summer (mid-summer and late summer/fall subyearlings) grew faster than salmon from other habitats and time periods. These findings present a unique example of the complexity of understanding the influences of the many processes that generate variation in growth rate for juvenile anadromous fish inhabiting estuaries.     

Structural and Functional Composition of Benthic Nematode Assemblages During a Natural Recovery Process of <Emphasis Type="Italic">Zostera noltii</Emphasis> Seagrass Beds

In 2008, the stable seagrass beds of the Mira estuary (SW Portugal) disappeared completely; however, during 2009, they have begun to present early symptoms of natural recovery, characterised by a strongly heterogeneous distribution. This study was designed to investigate the spatial and temporal variability patterns of species composition, densities and trophic composition of the benthic nematode assemblages in this early recovery process, at two sampling sites with three stations each and at five sampling occasions. Because of the erratic and highly patchy seagrass recovery and the high environmental similarity of the two sampling sites, we expected within-site variability in nematode assemblages to exceed between-site variability. However, contrary to that expectation, whilst nematode genus composition was broadly similar between sites, nematode densities differed significantly between sites, and this between-site variability exceeded within-site variability. This may be linked to differences in the Zostera recovery patterns between both sites. In addition, no clear temporal patterns of nematode density, trophic composition and diversity were evident. Nematode assemblages generally resembled those of other estuarine muddy intertidal areas, which have a high tolerance of stress conditions.