Using GIS to improve public health emergency response in rural areas during the COVID-19 crisis: A case study of South Carolina,US

Geographic information systems (GIS) have become essential tools in the public health domain, especially when it comes to monitoring and surveillance of disease. The purpose of this article is to describe and explore the benefits of using GIS to improve public health emergency response during a global pandemic and, in particular, how to effectively optimize the allocation of public health resources in a rural setting using a data-driven approach that considers the multifactorial demand for new COVID-19 testing sites. Herein, the authors present their interprofessional project as an example of such efforts to inform applications for practice. The team developed a GIS-based multicriteria decision analysis model for use by decision-makers and public health experts in similar future planning and response scenarios. Focus is placed on rural characteristics (e.g., accessibility), vulnerable populations, and daily changing conditions (e.g., COVID-19 daily case fluctuations) that create additional challenges for public health agencies and policymakers.     

Climatic Trends and Temporal Patterns of Phytoplankton Composition, Abundance, and Succession in the Indian River Lagoon, Florida, USA

This paper describes the results of 10 years of water quality monitoring in the Indian River Lagoon Florida, with special emphasis on the relationships between trends in climatic conditions and the distribution, composition, and abundance of the phytoplankton community. The Indian River Lagoon, which spans 220 km of Florida’s east coast, is a region of particular concern because of the rapid rate of human development throughout the region and the hydrologically restricted character of the lagoon, which heightens the potential for algal bloom. Water sampling was carried out on a monthly to twice-monthly basis at six sites located in the northern and central lagoon. The 10-year study included both extended periods of below and above average rainfall. A number of ecologically distinct regions exist within the lagoon, which differ considerably in water exchange properties and watershed inputs. The northern lagoon is characterized by longer water residence times, lower phosphorus concentrations, higher nitrogen concentrations, and more stable salinity conditions than the central lagoon. Mean phytoplankton biovolumes were substantially higher at the sites in the northern lagoon than at the sites in the central lagoon, and algal blooms were more common and intense in the former region. Inter-annual patterns of phytoplankton biovolume were also different in the northern and central lagoon. In the northern lagoon, phytoplankton biovolumes were lowest during the drought period, from the autumn of 1998 to the spring of 2001. By contrast, algal bloom events in the central lagoon were not only less frequent but were not tied to periods of high rainfall. The most widespread and common bloom formers were the potentially toxic dinoflagellate Pyrodinium bahamense var. bahamense and two centric diatoms, Dactyliosolen fragilissimus and Cerataulina pelagica. Many of the biovolume peaks observed over the study period were attributable to these three species. The results of time series modeling of phytoplankton dynamics further highlighted the disparities between the two regions of the lagoon in terms of the suite of parameters that best predict the observed trends in the biomass of phytoplankton. Overall, the outcome of this initial modeling effort in the Indian River Lagoon suggests that time series approaches can help define the factors that influence phytoplankton dynamics.     

High-resolution seafloor mapping using the DSL-120 sonar system: Quantitative assessment of sidescan and phase-bathymetry data from the Lucky Strike segment of the Mid-Atlantic Ridge

High-resolution, side-looking sonar data collected near the seafloor (100 m altitude) provide important structural and topographic information for defining the geological history and current tectonic framework of seafloor terrains. DSL-120 kHz sonar data collected in the rift valley of the Lucky Strike segment of the Mid-Atlantic Ridge near 37° N provide the ability to quantitatively assess the effective resolution limits of both the sidescan imagery and the computed phase-bathymetry of this sonar system. While the theoretical, vertical and horizontal pixel resolutions of the DSL-120 system are <1 m, statistical analysis of DSL-120 sonar data collected from the Lucky Strike segment indicates that the effective spatial resolution of features is 1–2 m for sidescan imagery and 4 m for phase-bathymetry in the seafloor terrain of the Mid-Atlantic Ridge rift valley. Comparison of multibeam bathymetry data collected at the sea-surface with deep-tow DSL-120 bathymetry indicates that depth differences are on the order of the resolution of the multibeam system (10–30 m). Much of this residual can be accounted for by navigational mismatches and the higher resolving ability of the DSL-120 data, which has a bathymetric footprint on the seafloor that is 20 times smaller than that of hull-mounted multibeam at these seafloor depths (2000 m). Comparison of DSL-120 bathymetry with itself on crossing lines indicates that residual depth values are ±20 m, with much of that variation being accounted for by navigational errors. A DSL-120 survey conducted in 1998 on the Juan de Fuca Ridge with better navigation and less complex seafloor terrain had residual depth values half those of the Lucky Strike survey. The quality of the bathymetry data varies as a function of position within the swath, with poorer data directly beneath the tow vehicle and also towards the swath edges.Variations in sidescan amplitude observed across the rift valley and on Lucky Strike Seamount correlate well with changes in seafloor roughness caused by transitions from sedimented seafloor to bare rock outcrops. Distinct changes in sonar backscatter amplitude were also observed between areas covered with hydrothermal pavement that grade into lava flows and the collapsed surface of the lava lake in the summit depression of Lucky Strike Seamount. Small features on the seafloor, including volcanic constructional features (e.g., small cones, haystacks, fissures and collapse features) and hydrothermal vent chimneys or mounds taller than 2 m and greater than 9 m² in surface area, can easily be resolved and mapped using this system. These features at Lucky Strike have been confirmed visually using the submersible Alvin, the remotely operated vehicle Jason, and the towed optical/acoustic mapping system Argo II.     

Spatial Variation in the Structure of Kelp Forest Communities Along a Wave Exposure Gradient

Abstract. Four sites were sampled in kelp (Macrocysiis pyrifera) forests occupying rocky bottom habitats along a wave exposure gradient in central California. Consistent betwecn-site differences were found in the three major structural elements - the surface canopy, the undcrstory assemblage, and the ground cover/turf assemblage - of kelp forest communities. Macrocysiis pyrifera was found at all four sites. Nereucyslis tuelkeana only at the most exposed site. The understory kelps Laminaria setchellii and Pterygopltora californica were also characteristic of exposed sites. Articulated coralline algae were more abundant at exposed sites than protected, while fleshy red algae showed the opposite pattern. All four study sites were located along 8.5 km of coastline, and thus were assumed to have available to them the same species pool for colonization. The substrate composition was the same and the amount of unconsolidated substrate was similar at all four sites. We suggest that exposure to wave-generated water motion, through its influence on the surface canopy and therefore on the amount of light reaching the bottom, is responsible for these between-site differences.     

Controls on Fe reduction and mineral formation by a subsurface bacterium

The reductive dissolution of FeIII (hydr)oxides by dissimilatory iron-reducing bacteria (DIRB) could have a large impact on sediment genesis and Fe transport. If DIRB are able to reduce FeIII in minerals of high structural order to carry out anaerobic respiration, their range could encompass virtually every O₂-free environment containing FeIII and adequate conditions for cell growth. Previous studies have established that Shewanella putrefaciens CN32, a known DIRB, will reduce crystalline Fe oxides when initially grown at high densities in a nutrient-rich broth, conditions that poorly model the environments where CN32 is found. By contrast, we grew CN32 by batch culture solely in a minimal growth medium. The stringent conditions imposed by the growth method better represent the conditions that cells are likely to encounter in their natural habitat. Furthermore, the expression of reductases necessary to carry out dissimilatory Fe reduction depends on the method of growth. It was found that under anaerobic conditions CN32 reduced hydrous ferric oxide (HFO), a poorly crystalline FeIII mineral, and did not reduce suspensions containing 4 mM FeIII in the form of poorly ordered nanometer-sized goethite (α-FeOOH), well-ordered micron-sized goethite, or nanometer-sized hematite (α-Fe₂O₃) crystallites. Transmission electron microscopy (TEM) showed that all minerals but the micron-sized goethite attached extensively to the bacteria and appeared to penetrate the outer cellular membrane. In the treatment with HFO, new FeII and FeIII minerals formed during reduction of HFO-Fe in culture medium containing 4.0 mmol/L P_i (soluble inorganic P), as observed by TEM with energy-dispersive X-ray spectroscopy, selected area electron diffraction, and X-ray diffraction. The minerals included magnetite (Fe₃O₄), goethite, green rust, and vivianite [Fe₃(PO₄)₂ · 8H₂O]. Vivianite appeared to be the stable end product and the mean coherence length was influenced by the rate of FeIII reduction. When P_i was 0.4 mol/L under otherwise identical conditions, goethite was the only mineral observed to form, and less Fe²⁺ was produced overall. Hence, the ability of DIRB to reduce Fe (hydr)oxides may be limited when the bacteria are grown under nutrient-limited conditions, and the minerals that result depend on the vigor of FeIII reduction.     

Space weathering on the Moon: Patina on Apollo 17 samples 75075 and 76015

Abstract— We studied patinas on lunar rocks 75075 and 76015 from the Apollo collection using a multi-disciplinary approach, including scanning electron microscopy (SEM), energy dispersive x-ray spectrometry (EDS), transmission electron microscopy (TEM), wavelength-dispersive x-ray (WDS) mapping, Mössbauer spectroscopy, spectral reflectance, and microspectrophotometry. Based on SEM petrography, we have defined three textural types of patina: glazed, fragmental, and classic (cratered). The presence of classic patina is diagnostic of lunar samples that have been exposed directly to the space weathering environment. It is characterized by the presence of microcraters and glass pancakes and is the patina type studied by earlier workers. Classic patina is found on 76015 but not on 75075. Glazed patina is found on both 76015 and 75075, whereas fragmental patina is found only on 75075. The glazed and fragmental patinas on 75075 were probably formed as a result of relatively large nearby impacts; and although these two types of patina are not strictly the result of direct exposure to the space weathering environment, they are important because they affect the optical properties of the rocks. Field emission gun SEM (FE-SEM) of classic patina on 76015 shows evidence of possible solar wind sputtering erosion. Transmission electron microscope studies of 76015 reveal the presence of impact-generated deposits and solar flare particle tracks which, like microcraters and pancakes, are diagnostic of direct exposure to space weathering processes. The outermost surface of the 76015 patina consists of an amorphous rim very much like the rims found on individual lunar soil grains; this amorphous patina rim probably formed by similar processes of impact-generated vapor condensation and possible sputter deposition. Wavelength-dispersive x-ray element maps of polished thin sections of 75075 and 76015 indicate that patina compositions are poor indicators of the compositions and mineralogies of the rocks underlying them. On average, the reflectance spectra of patinas on both samples are slightly darker than those of their unweathered equivalents. Microreflectance measurements show that a thick patina can dramatically alter the optical properties of the rock on which it forms. The backscatter Mössbauer (BaMS) spectrum of a patina-covered surface of 76015 is very similar to that of an unweathered surface, indicating that the Mössbauer signal is generated from beneath the patina. Because BaMS “sees” through surface space-weathering effects to the underlying rock, this technique has great potential for use in robotic missions to other planetary bodies.